Cyclopterus lumpus (lumpfish): 117740320
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Entry
117740320 CDS
T09199
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b isoform X1
KO
K07206
tuberous sclerosis 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04140
Autophagy - animal
clum04150
mTOR signaling pathway
clum04218
Cellular senescence
clum04910
Insulin signaling pathway
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117740320 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117740320 (tsc1b)
09143 Cell growth and death
04218 Cellular senescence
117740320 (tsc1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117740320 (tsc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117740320 (tsc1b)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
HSBP1
DUF7310
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
117740320
NCBI-ProteinID:
XP_034402541
Ensembl:
ENSCLMG00005017678
UniProt:
A0A8C3A3I4
LinkDB
All DBs
Position
12:15940178..15959373
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AA seq
1272 aa
AA seq
DB search
MAREQPNVGDLLPLLETSDLQQLEEIRGLINEQLSTERGSMLLNGLVDYFLETNSAQAMH
ILSSVREPHDKHLLDKMNECMTKQACRLPTLTLLGHVIRKQPSWIHKIARYPLLLSLLKC
LKTDTDVVVLITGVLVLITLLPMIPQAGKQHLWEYFDIFGRLASWNLKNPGHVSEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENMETFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKKYEIHDIVIECAKVSLDPKEASCEEGYANMPENFYPQVHLRPQDCTSSPYT
DLHSSYGSSSSTPFSTPRQPLPPPLSLPPFSGTQSSPRSPQTSRRQNSTCELNSSSGGKD
PLWSPSSLCGMATPPSSRGMSPNLELSHSASHLPGRFQCTSGGKGTPASSTPATSSPPPT
LSDDFPIISLPANTVQSSPPRKDRRHGESGKPALVRQEPVKDTEKSADVAAHRDAGAAES
VSMTLTELSVFMKKQELELQLRTEKEREEAAITEELLKIEETQELSGLRGFDSPFYLTTE
TLTGCQAQDETFSDTQSGGPGRDTRHVASTPDKGETTASTSGAGSDRGGGGATGDSRSSA
LGLEQSWSFQSGFTPIEHHLHWSPSAPGDDIVAKFGMFSPSPCGKTPAPVPYESFFDLAL
PRAASLFVGQKTSEAVHKAALERLLQREEGLEDGEEEGVATASPLEVLDRLVQQGSDTHD
KVLKRLPLPSKSADWTHFGGSAPLDELHTLRSQLLLLHNQLLYERYKREQHAVRNRRLLR
RIINATALEEQNNAMKDQLNLQSVDIESLRESLQVEQQRYRQLWDDRETVVTRLHNQIRQ
LQQGRDDYYTKNQELQSKLQECQKRIDELEAELQRANNKVCHTGHLLNQMSIKLSNSEST
QQQMSFLNKQLLLLGEAHKLSMQELPHAGANNDTKEAQMLKLSYGKEVETLRQSLLVQGQ
KLDAAQQRVGELETHHSKKEHLITEQKKFLEDVKCQAKAELQASDSRYQAQRRITQLLQT
ELLQLYSRVETEAPAGTGSSSPPGGSADPHDSSVMVPGGQLHTNEEVVSRPPHDTPRGND
STLSSRQPKANNSSKTTASSLSGSQDLAPPRLVEPCLSGPYAKSLAPLPLSGAPLTVGSY
PSAKSFLGMRARELFRNKSESQCDEEEQPPSLLAGLAHGLKTELCVEPPCPGYIAPVGPS
HSPVPASAPAPATPLTVPTKEPPSEPKQRASSQESPRRKAGSGGGRAQAGSGRPRQQQLK
IMDYNETHHEHS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggccagggagcagccgaacgtgggggacctcctcccgctccttgagacctccgacctc
cagcagctagaagagatccgaggcctcatcaacgagcagctcagcactgagcgagggtcc
atgctgctgaacgggctggtggactacttcttggaaacaaactctgcccaggccatgcat
atcctctcctcagtcagagagccacatgataagcaccttctggacaagatgaatgagtgt
atgaccaaacaggcctgtcgtctgcccaccctcaccctgctcggccacgtgatccgcaag
cagccgtcctggatccacaagatcgctcgataccctctgctgctgtcgctgctcaaatgc
ctcaagacggatacggacgtagtggtcctgataaccggagtgctggtgctgatcactctg
ctacccatgatccctcaagccgggaagcaacacctgtgggagtatttcgacatcttcggc
cgcctggcgtcttggaacctgaagaatcctgggcacgtttcggaggtttatctaatccac
ctgcacgccagcgtctactcactcttccaccgtctctacggcatgtacccttgcaacttt
gtgtcctacctgcgctcccattacagcatgaaggagaacatggaaacttttgaggaagta
gtgaagccgatgcttgaacacgttcgtatccacccagagctagtgacaggaaccaaggac
catgagcttgaccccaccagatggaaaaagtacgaaatccacgatatcgtcattgaatgt
gccaaagtgtctcttgaccccaaggaggcctcctgtgaggagggctacgccaacatgcct
gaaaacttttacccccaagtccacctgcgaccacaagactgcacttccagcccctacaca
gacctccacagcagctacggaagctcttcttcgaccccgttctcgactccacggcagccg
ctacccccgcccctgtccttgccccccttctcagggacgcagtcctcgccccgcagccca
cagacctccagacggcagaactccacctgtgaactcaactcttcctctggggggaaggac
cctctgtggagcccctcctcgttgtgtggcatggccacgcccccttcctccagaggcatg
tcgcccaacctggagctctcccacagtgcctcacaccttcccggccgcttccaatgcaca
tcaggaggaaaaggaacgcctgcctccagcactccagccacctcttccccaccgcccacc
ctatcagatgacttccccataatctccttaccagccaacacagtccaatccagtccacca
agaaaggatcgccgacatggagaaagtggtaagcctgcactggtgcgacaggaaccagtg
aaagacacagagaagagtgcggacgtagccgcacacagagatgcgggcgccgcggagagc
gtctccatgactttgacggagctgtcggtcttcatgaagaaacaggagctggagcttcag
ctgagaacggagaaagagagggaagaggctgccatcaccgaggagctgctgaagatcgag
gagacacaggagctgtcgggtttgaggggcttcgactccccgttctatctcaccacagag
actctgactggctgtcaggcacaagacgagaccttctccgacacccagtctggagggccc
ggcagggacacccgacatgtggcatcgacgccggacaaaggggagaccaccgcgagtacc
agcggcgcagggagtgaccgaggaggaggtggagcaacaggggacagccggagttcggcc
ctcggcctcgagcagtcctggtccttccagtcagggttcacccccatcgagcaccacctg
cactggagcccctcggccccgggcgacgacatcgtggctaagttcgggatgttctccccg
agcccgtgcggtaagaccccggctccggtgccctacgagtcgttcttcgacctggccctg
cccagggcggcctcgctcttcgtgggccagaagacgtcggaggcggtgcacaaggcggcg
ctggagaggctgttgcagcgggaggaggggctggaggacggggaggaggaaggggtagcg
accgcttcgccactggaggtgctggatcgccttgttcagcagggcagcgacacccatgat
aaagttctcaagagattacctttgccaagtaagtcagctgactggacgcactttggaggc
tcggctccgctggacgagcttcacacgctgcgcagccagctgctcctgctgcacaaccag
ctgctgtacgagcgctacaagagggagcagcacgccgtccgcaaccgacgcctcctccga
cgcatcatcaacgccaccgcactggaggagcagaacaacgctatgaaggaccagctgaac
ctgcagagtgtggacatcgagtctctgagggagagtctgcaggtggagcagcagcggtac
aggcagctgtgggacgaccgggagacggtggtgacgaggctgcacaatcagatcagacag
ctgcagcaggggcgggacgactactacaccaagaaccaggagctccagagcaagctgcag
gagtgtcagaagaggatcgatgaactggaggcggagcttcagagggccaacaacaaagtc
tgccacactggtcacctcctcaaccagatgtctatcaagctgagcaacagtgagagcacc
cagcagcagatgagcttcctgaacaagcagctgctgctcctcggggaggcgcataagctg
tccatgcaggagttacctcacgcgggcgccaacaacgatacgaaggaggcccagatgctg
aagttgtcttatgggaaagaggtggagacgctgaggcagagcctgctggttcagggtcag
aaactggatgcagcgcagcagagagtcggcgagctggagacgcaccactccaagaaggag
cacctcatcaccgagcagaagaagttcctcgaggacgtgaagtgtcaagcgaaggcggag
ctgcaggcctcagacagcaggtatcaggctcagaggagaatcactcagctgctgcagact
gaactcctgcagctctacagcagagtggagacggaggctccggccggcaccggcagcagt
tcgccaccagggggcagcgctgacccacacgactccagtgttatggtgccaggtggacaa
cttcacaccaacgaagaagtggtcagtagaccaccacacgacacccctcggggcaacgac
agcactttatcgtcacggcaaccaaaggcgaacaactcttccaagaccacggccagctct
ctcagcggcagccaggacctggccccgccccggctggtggagccctgcctgtccggtccc
tacgccaaatcgctggcgcccctgcccctctccggcgcgccgctcactgtgggctcctac
cccagcgccaagagcttcctgggcatgagggcccgcgagctgttccgcaacaaaagtgag
agccagtgtgacgaggaggagcagccgccgtcgctcctggctggcctcgcccacggcctg
aagactgagctgtgcgtggagccgccctgcccgggttacatcgcccccgtcggcccgtca
cattcccccgtcccggcctctgctcccgctcctgccacccctctcactgtgcccaccaag
gagcccccctccgagcccaagcagcgggcctccagccaggaaagcccccgcaggaaggca
gggtcgggtggagggcgggcccaggcgggttcagggcgcccccggcagcagcagttaaag
atcatggactacaacgaaacacatcacgagcacagttag
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