Cyclopterus lumpus (lumpfish): 117740339
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Entry
117740339 CDS
T09199
Symbol
dnm1a
Name
(RefSeq) dynamin-1a isoform X1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
clum05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117740339 (dnm1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117740339 (dnm1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117740339 (dnm1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117740339 (dnm1a)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
117740339 (dnm1a)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
117740339 (dnm1a)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
117740339 (dnm1a)
RhoA-dependent endocytosis
117740339 (dnm1a)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117740339 (dnm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
MMR_HSR1
DUF5130
Motif
Other DBs
NCBI-GeneID:
117740339
NCBI-ProteinID:
XP_034402569
Ensembl:
ENSCLMG00005012169
LinkDB
All DBs
Position
12:complement(8763693..8807597)
Genome browser
AA seq
861 aa
AA seq
DB search
MGNRGMEDLIPQVNRMQDAFSAIGQNANLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRG
SGIVTRRPLVLQLMNCPTEYAEFLHCKGKKFVDFDEVRQEIEAETDRVTGANKGISSVPI
NLRVYSPNVLNLTLVDLPGMTKVPVGDQPADIEAQIREMLMQFVTKENCLMLAVSPANSD
LANSDALKIAKEVDPQGMRTIGVITKLDLMDEGTDAKDILENKLLPLRRGYIGVVNRSQK
DIDGRKDINAAMAAERKFFLSHPGYRHLADRMGTPYLQKMLNQQLTNHIRDTLPSLRAKL
QSQLLSIEKEVEQYKNFRPDDPSRKTKALLQMVQQFSVDFEKCIEGSGDQIDTAELSGGA
RINRIFHERFPFELVKMEFDEKELRKEISYAIKNIHGIRTGLFTPDMAFETIVKRQIGKI
KEPCTKCVDMVISELVNTVRQCTKKLAQYPLLREEMERIVTQHIRDRENRTKNQVLLLID
IELSYMNTNHEDFIGFANAQQRINQLNKKKAAGNQDEVMPERGVSDRFKVIRKGWLTINN
ISIMKGGAKEYWFVLTAESLSWYKDDEEKEKKYMLQVDNLKLRDVEKGFMSSKHIFALFN
TEQRNVYKDYRQLELACETQEDIDAWKASFLRAGVYPERVTDKEGKSDGSDENGSDNIMH
SMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNSKEFINAELLAQLYSCG
DQSTLMEESQEQAQHRDEMLRMYHALREALSIIGDISTSTITTTMPPPVDDSWLQVQRSS
SGGRSPASSPTPNRRAPPGPPGRPVSRGPPPGPPPAGGPPVPSRPGASPDPYSGPPPTVP
SRPNRAPPSVPSRRPPPSPTH
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccggggaatggaggatttgattcctcaggtgaaccgcatgcaggatgccttc
tccgccatcgggcagaacgcgaacctggaccttccccagatcgccgtggtgggcggccag
agtgcgggcaagagctcggtgctggagaacttcgtcgggaaggatttccttcctcgtggt
tctggcattgtgactcgtcggcctttggttttgcagctgatgaactgtcccacagaatat
gctgagttccttcactgtaagggcaaaaagttcgtagattttgacgaggtccggcaggag
atcgaggcagagaccgaccgcgtcaccggggccaacaagggcatctcgtctgtgcccatc
aacctgcgtgtctactcccctaatgtgctgaacctgaccctggtggacctgccggggatg
accaaagtgccggtgggtgaccagcctgcggacatcgaggcccagattagagaaatgctg
atgcagtttgtcaccaaggagaactgcctgatgctggccgtctccccggccaactctgat
ctggccaactctgatgctttaaagattgccaaagaggtcgaccctcagggtatgaggacc
atcggtgtgatcaccaagttggacctgatggacgagggcaccgatgctaaggacatcctg
gagaataagctgctcccgctcaggaggggttacatcggtgtggtgaacaggagccagaag
gacatagatggcaggaaggacatcaatgctgctatggccgctgagaggaagttcttcctc
tcccaccctggatatagacacctggccgaccgtatgggcactccctacctgcagaaaatg
ctcaatcagcaactgaccaaccacatccgggacaccctgcctagtctgcgggccaagctt
cagagtcagcttctctccatcgagaaggaggtggagcaatacaagaacttccgacccgac
gatccgtctcgcaagaccaaggctctgctccagatggtgcagcagttctctgtggacttt
gagaaatgtatagagggctccggggaccagattgacacagctgagctgtcaggtggtgct
aggatcaatcgcatcttccatgaacgcttcccctttgaactggtcaagatggagtttgat
gagaaagagctccgcaaggagatcagctacgccatcaagaacattcatggaatcagaact
ggcctcttcaccccggacatggcctttgagaccattgtgaaaaggcagattgggaagatt
aaagagccttgcaccaaatgtgtggacatggtcatttctgagctagtcaatacggttagg
cagtgtaccaagaagctggctcagtatcccctgttgagagaggagatggagagaatcgtc
acccagcacatcagggacagagaaaaccgcactaagaaccaggtgttgctgttgatagac
attgagttgtcttacatgaacaccaaccatgaggacttcattggatttgccaacgctcag
caaaggatcaaccaattgaacaagaagaaagctgctggcaaccaggatgaggtcatgccg
gaaagaggagttagcgatcggttcaaggtgatcaggaagggctggctgaccatcaacaac
atcagcatcatgaagggaggagccaaggagtactggtttgtcctcaccgccgagtccttg
tcctggtataaagacgatgaggagaaggagaagaagtacatgctgcaggtggacaacctg
aagctgcgcgatgtggagaaaggtttcatgtccagcaagcacatctttgccctcttcaac
accgaacagagaaatgtgtacaaggactaccgtcagctggagctggcctgtgagactcag
gaagacatcgatgcctggaaggcctccttcctcagagctggagtttatcctgaacgggtc
acggataaggaaggaaagagtgacggcagcgatgaaaatggctctgacaacataatgcac
agcatggaccctcagctggagcggcaggtggagaccattcgtaacctggttgactcctac
atggccatcgtcaacaagaccgtccgggacttgatgccgaagaccatcatgcacctcatg
attaacaatagtaaagagttcatcaacgcagagctgctggcccagctgtactcgtgcggc
gaccagagcacgctgatggaggagtctcaggagcaggcccagcaccgggatgagatgctg
cggatgtaccacgccctgcgggaggccctcagcatcatcggtgacatcagcacatccacc
ataaccaccaccatgccgcctccggtggatgactcttggctgcaggtgcagcggagcagc
tccggaggaaggtctccagccagcagtccaactccaaaccgcagggcaccaccaggacct
ccgggccgcccggtctctcgtgggcctccacctgggcctcctcctgctgggggaccccct
gtcccgtctcgcccgggggcttctccggacccttacagtgggccaccacccactgtgcct
tcccgccctaaccgcgcacccccaagtgtgcctagtcggagacccccaccttctccaacc
cactag
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