Cyclopterus lumpus (lumpfish): 117740362
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Entry
117740362 CDS
T09199
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117740362 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117740362 (exosc2)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117740362 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117740362 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
117740362
NCBI-ProteinID:
XP_034402611
Ensembl:
ENSCLMG00005002457
UniProt:
A0A8C2YXF2
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All DBs
Position
12:complement(9417713..9421093)
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AA seq
293 aa
AA seq
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MAADMRLPTFQKSASLSVSAFDRKDLVVPGDVITSDTGFMRGHGTYVDDDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSMHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEHLEEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaacttttcaaaaatcagcctcactgtcggtttctgct
ttcgaccgaaaagatctggtcgtccccggcgatgttatcacttcagacaccggcttcatg
cggggtcatggtacctatgttgatgatgacaagctgacggcttcagttgctggagaggtg
cagagggtagacaagctgatctgtgtccgaccacttaagaccaggttcaacggtgaggtt
ggagatgtggtggttggcagaatcacagaggtacaacagaaaaggtggaaggtggagacc
aactcccgactggactcggttctcttgttgtcctctgtcaatctgcctggaggagagctg
aggagacgatcagcagaagatgagcttaccatgagagaataccttcaggagggcgatctc
atcagtgcagaggtgcagtctgtcttctcagatggagccctatccatgcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtgctggtacagctttctccttctctgatcaag
aggcagaaaacccatttccacaacctgccttgtggtgcatccatcatcctcgggaataac
ggctttgtgtggttgtatcccacacctgaacatctggaggaggaggctgggggcttttat
accagcctggagcctgttagtctatcagatcgagaggtgatttcacggttgagaaactgc
ctactggctttggctgcacacaaggtccttttgtatgacaccagtgttctctattgctat
gaatcttcagttcaacatcaggtcaaggacatcttgaaaccagaagtgatggaggagatt
gtaatgttgacacaacagaagctgttggaacaggaaggttaa
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integrated database retrieval system