KEGG   Cyclopterus lumpus (lumpfish): 117740362
Entry
117740362         CDS       T09199                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117740362 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117740362 (exosc2)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117740362 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     117740362 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 117740362
NCBI-ProteinID: XP_034402611
Ensembl: ENSCLMG00005002457
UniProt: A0A8C2YXF2
LinkDB
Position
12:complement(9417713..9421093)
AA seq 293 aa
MAADMRLPTFQKSASLSVSAFDRKDLVVPGDVITSDTGFMRGHGTYVDDDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSMHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEHLEEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggctgctgacatgagattaccaacttttcaaaaatcagcctcactgtcggtttctgct
ttcgaccgaaaagatctggtcgtccccggcgatgttatcacttcagacaccggcttcatg
cggggtcatggtacctatgttgatgatgacaagctgacggcttcagttgctggagaggtg
cagagggtagacaagctgatctgtgtccgaccacttaagaccaggttcaacggtgaggtt
ggagatgtggtggttggcagaatcacagaggtacaacagaaaaggtggaaggtggagacc
aactcccgactggactcggttctcttgttgtcctctgtcaatctgcctggaggagagctg
aggagacgatcagcagaagatgagcttaccatgagagaataccttcaggagggcgatctc
atcagtgcagaggtgcagtctgtcttctcagatggagccctatccatgcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtgctggtacagctttctccttctctgatcaag
aggcagaaaacccatttccacaacctgccttgtggtgcatccatcatcctcgggaataac
ggctttgtgtggttgtatcccacacctgaacatctggaggaggaggctgggggcttttat
accagcctggagcctgttagtctatcagatcgagaggtgatttcacggttgagaaactgc
ctactggctttggctgcacacaaggtccttttgtatgacaccagtgttctctattgctat
gaatcttcagttcaacatcaggtcaaggacatcttgaaaccagaagtgatggaggagatt
gtaatgttgacacaacagaagctgttggaacaggaaggttaa

DBGET integrated database retrieval system