Cyclopterus lumpus (lumpfish): 117740363
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Entry
117740363 CDS
T09199
Symbol
cldn5b
Name
(RefSeq) claudin-5b
KO
K06087
claudin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03272
Virion - Hepatitis viruses
clum04382
Cornified envelope formation
clum04514
Cell adhesion molecules
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117740363 (cldn5b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117740363 (cldn5b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117740363 (cldn5b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117740363 (cldn5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117740363 (cldn5b)
04147 Exosome [BR:
clum04147
]
117740363 (cldn5b)
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Stereociliary proteins
117740363 (cldn5b)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117740363 (cldn5b)
Exosomal proteins of colorectal cancer cells
117740363 (cldn5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
ScfRs
TMEM37
Motif
Other DBs
NCBI-GeneID:
117740363
NCBI-ProteinID:
XP_034402612
Ensembl:
ENSCLMG00005019596
LinkDB
All DBs
Position
12:complement(3209361..3210582)
Genome browser
AA seq
215 aa
AA seq
DB search
MLAACLESLGLAQGLAGSLLVMVACGLPTWKVTAFIDSNIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALSRDLQTARALTVVAAVLAVAALSVTVAGAQCTNCLREEAAKARAVSA
GAVLYVASGLSVLVPLCWMAHSIIVDFHDPLVPPSKKREIGAAIYIGWAGSALLLLGGAL
LCGSLSRGARGAHPIKYAHAESFASNGAFDKKHYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgcgtgcctggagtccctcggcctcgcgcagggcctcgcgggctccctgctg
gtgatggtcgcgtgcgggctgcccacgtggaaagtcaccgcgttcatcgactccaacatc
gtggtggcgcagaccatctgggacgggctgtggatgtcgtgcgtggtgcagagcacgggc
cagatgcagtgtaaggtgcacgactcggtgctggccctgtcgcgggacctgcagacggcg
cgcgccctcaccgtcgtggccgcggtgctcgccgtggccgcgctctcggtgacggtggcc
ggcgcgcagtgcaccaactgcctccgggaggaggcggcgaaggcgcgcgcggtgagcgcc
ggcgcggtgctgtacgtcgccagcgggctgtccgtgctcgtgccgctctgctggatggcc
cacagcatcatcgtggacttccacgacccgctcgtgcctccgtccaagaagcgagagatc
ggggccgcgatctacatcggctgggccgggagcgcgctgctgctgctcggcggcgcgctg
ctgtgcggctcgctgtcccgcggcgcgaggggcgcgcacccgatcaagtacgcgcacgcc
gagagcttcgcctccaacggggccttcgacaagaagcattacgtttag
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