Cyclopterus lumpus (lumpfish): 117740367
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Entry
117740367 CDS
T09199
Symbol
nid2a
Name
(RefSeq) nidogen-2
KO
K06826
nidogen (entactin)
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117740367 (nid2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117740367 (nid2a)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
117740367 (nid2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
G2F
NIDO
EGF_3
Ldl_recept_b
EGF
cEGF
EGF_CA
hEGF
FXa_inhibition
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
117740367
NCBI-ProteinID:
XP_034402621
LinkDB
All DBs
Position
2:complement(6651769..6687756)
Genome browser
AA seq
2101 aa
AA seq
DB search
MESGGILAACLLCWSCGVCAVSAIRRADMFPYGALSGDQILAEGDDETSRVLLLPRPLNF
YDSRYYQLYVATNGIISAQDLPMEKQYVDDGFPTDFPVVAPFLADIDTSGGRGQIYYRVT
ETPSVLNRVAQEVHRGFPDAKFTPTHVVVATWEDVAAYEERTRTAGPSNKVNTFQAVIGY
DETDSYVLFLYPEGGLNFFGTRPKESYNVEIELPARVGFSRGEITYLIFSRTDGPHYSVT
SDEQSVKNLYQVGNTGIPGIWLFHTGNSYSFDNIVPASIGGLLVTPPVRGHGLSLDTTTA
EYGEFEEYSDNQEEEEDYPLTGGDPEFQTALAGGDPSESLQPASPDAPSSPSEDTRHQVA
YGTEDVPLTSEPRYNSEPAERQYAPPNPPERAPEGGGQQTQEQQPQVPLEVVDVYPPHRN
EPPLSPGGHVVSVDEDDVDFDTGVIQYTTENKETCARFQQQCSQNALCSDYATGFCCHCR
PGFYGNGRHCLPEGAPQRVSGKVSGTVTVGSTPMELNNIDLHAYIVVGDGRAYTAISEVP
EPVGWALMPLAPIGELFGWLFALELPNSQAGFKITGAEFTRRAEVIFYPGNQRLSIIQTG
HGLDDNNHLTVDTVVNGNVPFLPPGAEVTMDPFKEIYQYYPAVATSSSVREYSVVSAERG
AESFSFQLKQNITYRDCRHDNRAAVPETLQITMERVFLMYVKEERILRYAITNKISPVGV
QPTEPELVNPCYAGNHDCDTTAQCIPLEGQDFQCQCATGYRGDGRNCYDVDECAESLSSC
GAHAQCVNLPGSHRCQCQGGYEFGFDGRTCVDVDECSSSPCHSSARCINALGSFQCQCQP
GFHGDGFYCSQQEGQIVRPRSQCEQHRDSLQSGGERAGRPSLGAFVPQCDSDGRYRPLQC
HGSTGHCWCVDIRGQERAATRTPPGTAPKDCDRPDEPERPKTHCEHHRDSVQTTDREGYP
VVGAYVPQCEDNGQYTASQCHGSTGHCWCVDGNGQERAGTRTPPGTTHTDCSKPDEPERP
KTHCEHHRDSVQTTDREGYPVVGAYVPQCEDNGQYTASQCHGSTGHCWCVDGNGQERAGT
RTPPGTTHTDCSKPDEPERPKTHCEHHRDSVQTTDREGYPVVGAYVPQCEDNGQYTASQC
HGSTGHCWCVDGNGQERAGTRTPPGTTHTDCSKPDEPERPKTHCEHHRDSVQTTDREGYP
VVGAYVPQCEDNGQYTASQCHGSTGHCWCVDGNGQERAGTRTPPGTTHTDCSKPDEPERP
KTHCEHHRDSVQTTDREGYPVVGAYVPQCEDNGQYTSLQCHGSTGHCWCVDVRGQERAGT
RTPPGTPPKDCDRPDEPERPKTHCQHHRDRVHTSSPEGHPVVGAYIPQCDAGGQYIPLQC
HGSTGHCWCVDNRGQERTGTRTPPGAPPTDCDKPDEPERPKTHCEHHRDSVQTTGPEGYP
VVGAYVPQCEDNGQYTSLQCHGSTGHCWCVESGGQERTGTRTPPGTPPKDCDKPDEPVRP
RTYCEQHRDSVETTSPEGYPIIGVFAPQCDSNGQYTSQQCHGSTGHCWCVDGGGQERAGT
RTPPGTPPVDCDKPDEPERPKSHCEHHRDRAQATSQVGYPVVGAYVPQCDPDGQYLLLQC
HSSSGHCWCVDSRGQERTGTRTPPGTPPKDCDKPDEPERPKTHCEHHRDGVQTTGPEGRP
VVGAYVPQCEDNGQYLPLQCHGSTGHCWCVDDRGQERAGTRTPPGRPSVDCDRPGPVAPT
QRPESVCERWRASLIEHYGGKPEPQQYVPQCESDGQFSPVQCYGETTYCWCVDQDGREVP
GTRSNDVVKPACLPSVAPPTVRPLPRPDVTPPPNAEITLLYAQGQKIGALPLNGTSLDAT
RSKTLLTLHGSIVVGIAYDCKENQVYWTDLSARTINRASIAAGAEPEILVNTNLVSPEGL
AVDVKRRLMFWVDSNPDMIESANLDGSGRKTLFGTDLVNPRAIIVVSSTSTLYWTDWNRE
APKIESASVDGQNRKVVVSDGIGLPNALTYDSSSGQVCWADAGTKRLECVSPDGSGRRVV
HPSLNYPFSMVYYRNHFYYTDWRRDGVIAVSKDSGQITDEYLPDQRSHLYGIAIATTHCH
V
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggcggaatactggcggcgtgtcttctgtgctggagctgcggcgtgtgcgcg
gtctccgccatccggagggccgacatgttcccgtacggcgccctgagcggggatcagatt
ttggcggagggggacgatgaaacctccagagtgctgctcctgcccagacccttgaacttc
tacgactcccggtactaccagctatacgtggcgaccaacggcatcatatcagcccaggac
ctgccgatggagaagcagtacgttgacgacggcttccccacggacttccccgtggtggct
ccgtttctggccgacatcgacaccagcggagggcgagggcagatttactaccgggtgacg
gagacgcccagtgttctcaacagagtggcccaggaagtacaccgagggttcccggatgca
aaattcacgccaacgcacgtcgtggtcgcaacatgggaagacgttgcggcatatgaagag
cgaactcgaaccgccggaccctcgaacaaggtcaatacgttccaggccgtaattggttac
gatgagaccgattcatacgttctcttcctctaccctgaaggtggccttaacttctttggg
actcgccctaaggagtcttataatgttgagatagagcttcctgccagagttggctttagt
agaggagaaatcacatatctgatcttctcccggaccgacggacctcactacagcgttacc
agcgatgagcagagtgtgaaaaacctctaccaggtcgggaatacaggaattccaggtatt
tggcttttccacactgggaacagttactcttttgacaacattgttcctgcatccatcggt
ggcctccttgttaccccaccagttcgaggacatggcctctccctggacaccaccacagcc
gagtatggtgagtttgaggaatactctgacaaccaggaggaagaagaggattaccctctg
acaggcggggaccccgaattccagacagcccttgctggcggtgacccctcagagtccctt
caaccagcaagccctgatgctccctcgtccccttcggaggatactcgtcatcaggtggcg
tatggcactgaagatgtgccgttgacctctgaacccaggtacaactcagagccagcagag
aggcagtatgcaccccccaatcctccagaaagagcaccagagggaggtggccagcagact
caggaacagcaaccacaggttcccctggaggtggtggatgtctacccccctcacaggaat
gaaccacctctttcccctggaggtcacgtggtcagcgtggacgaagacgatgttgatttt
gacacaggagtgattcagtacactacagagaataaggaaacatgtgccagattccaacag
cagtgttcccagaatgcattgtgctccgactacgccacagggttctgctgtcactgccgg
cctggcttctatggcaacggacgccactgtctacccgagggtgctccacagcgagttagt
ggtaaggtgagcggaacagtgaccgtgggttcgactccaatggagctgaacaacattgat
cttcacgcctacatcgtggtgggcgatggcagagcgtacactgccatcagcgaggtacct
gagccagtgggctgggctctgatgccactcgcaccaataggagagctgtttggatggctg
tttgctctggagctgcccaatagccaagcgggattcaaaatcacaggtgctgagttcact
cgtcgtgcagaggtgatcttctaccccggcaaccagcgcctgtcaatcatccagacgggc
cacggcctcgacgacaacaatcacctcactgtggacactgtagtcaatggcaacgtgccc
ttcctgccccctggagcggaagttaccatggatccctttaaagagatctaccagtactac
ccagccgtcgccacctcctcctccgtgagggagtactcagtggtttcggccgagcgcggt
gccgaatccttctccttccagctaaagcagaacatcacatatcgcgactgtcgacacgac
aaccgcgccgccgtcccggagacgctgcagatcaccatggagagggtgtttttgatgtac
gtcaaggaggagcggattctgagatacgccatcaccaacaagatcagcccagtcggagtc
cagccaacggagcctgagctggtcaacccctgctacgccgggaaccacgactgcgacacc
acggcccagtgtatcccactggagggccaggacttccagtgccagtgtgcgactggttac
agaggggacggacgcaattgttacgacgtagacgagtgtgcggagagcttgagctcatgt
ggcgctcacgctcagtgcgtgaacctgcccggtagccaccgctgccagtgccaaggtggc
tatgagtttggcttcgacgggcgtacctgtgttgatgtagatgaatgcagctcctctccg
tgtcacagcagtgccagatgtatcaatgcactgggttccttccagtgccagtgccagcct
gggtttcatggtgatggtttctactgttcccagcaggaaggacaaatagttcggccgagg
agccagtgcgagcagcaccgagacagcctgcagagtgggggggaacgagccggtcgaccg
agtctcggagccttcgtccctcagtgcgactctgacggacgctaccgaccgctgcagtgt
cacggctccactggacattgttggtgtgtggacattagggggcaggagagagcagcaacc
aggacgccacctgggacggcacccaaagactgcgacagaccagatgaaccagagcgtcct
aaaactcactgtgagcaccacagagacagtgtgcagaccaccgacagagagggatatcct
gttgttggagcctacgtacctcagtgtgaggacaacggacagtacactgcttcacagtgt
cacggctccactggacattgttggtgtgtggacggtaacggacaggagagagcgggaaca
agaacaccacctggtacaacgcatacagactgcagcaaaccagatgaaccagagcgtcct
aaaactcactgtgagcaccatagagacagtgtgcagaccaccgacagagagggatatcct
gttgttggagcctacgtacctcagtgtgaggataacggacagtacactgcttcacagtgt
cacggctccactggacattgttggtgtgtggacggtaacggacaggagagagctggaaca
agaacaccacctggtacaacgcatacagactgcagcaaaccagatgaaccagagcgtcct
aaaactcactgtgagcaccatagagacagtgtgcagaccaccgacagagagggatatcct
gttgttggagcctacgtacctcagtgtgaggataacggacagtacactgcttcacagtgt
cacggctccactggacattgttggtgtgtggacggtaacggacaggagagagcgggaaca
agaacaccacctggtacaacgcatacagactgcagcaaaccagatgaaccagagcgtcct
aaaactcactgtgagcaccatagagacagtgtgcagaccaccgacagagagggatatcct
gttgttggagcctacgtacctcagtgtgaggataacggacagtacactgcttcacagtgt
cacggctccactggacattgttggtgtgtggacggtaacggacaggagagagcgggaaca
agaacaccacctggtacaacgcatacagactgcagcaaaccagatgaaccagagcgtcct
aaaactcactgtgagcaccacagagacagtgtgcagaccaccgacagagagggatatcct
gttgttggagcctacgtacctcagtgtgaggataacggacagtacacatcattacaatgt
cacggctccactgggcattgttggtgtgtggatgttagggggcaggagagagcaggaacc
aggactccacctggtacaccccctaaagactgtgacagaccagatgaaccagagcgtcct
aaaactcactgccagcaccacagagaccgggtgcacacctctagtccagagggacatcct
gttgttggagcctacatacctcagtgtgatgcaggaggacagtacattccactgcagtgt
catggctccactggacattgctggtgtgtggacaataggggacaagagaggacaggaacc
aggactccacctggtgcaccaccaacagactgtgacaaaccagatgaaccagagcgtcct
aaaactcactgtgagcaccacagagacagtgtgcagaccaccggtccagagggatatcct
gttgttggagcctacgtacctcagtgtgaggacaacggacagtacacatcattgcagtgt
cacggctccaccggacattgttggtgtgtggagagtgggggacaggagagaacaggaacc
aggactccacctggtacaccacccaaagactgtgacaaaccagatgagcctgtgcgtccc
agaacctactgtgagcagcacagagacagtgtagagaccaccagtccagaggggtatcct
ataataggagtgttcgcacctcagtgcgactcaaacggacagtacacatctcaacagtgc
cacggatcaactggacactgctggtgtgtggacggtgggggacaggagagagcaggaacc
aggactccacctggtacaccacctgtggattgtgacaaaccagatgaaccagagcgtcct
aaaagtcactgtgagcaccacagagacagagctcaggctaccagtcaagtgggttatcct
gtagttggagcttatgtgccccaatgcgaccctgatggacaatacctcctgctgcagtgc
cacagctctagtggacattgttggtgtgtggacagtaggggacaggagagaacaggaacc
aggactccacctggtacaccacccaaagactgtgacaaaccagatgaaccagagcgtcct
aaaactcactgtgagcaccacagagacggtgtgcagaccaccggtccagagggacgtcct
gttgttggagcctacgttcctcagtgtgaggataacggacagtatctacctctacagtgt
cacggttccactggacattgctggtgtgtagacgacaggggacaggagagagcaggaacc
aggactccacctggtagaccatctgtagactgtgacagaccaggccctgtggctccgacc
cagcgccctgagagcgtgtgcgagcgatggcgggccagcttgatcgagcactacggcggc
aagccggagccacagcagtacgtgccgcagtgcgagtcggacggacagttcagtccagtc
cagtgctacggagagaccacttactgctggtgcgtggaccaggacggacgggaggtcccc
ggaacccgatcaaatgacgtcgtcaaacctgcgtgccttccatcagtggccccgcccacc
gtgcgtccattgccccgcccagatgtcacccctccgccaaatgctgagatcacgctgctg
tacgcgcagggacagaaaataggagcgttgcctctcaacgggaccagcctagacgcaacc
cggtccaaaacactgctgaccctccatggttccatcgttgttggtatcgcctacgactgc
aaagagaaccaggtctattggacggatctgtccgccagaacgatcaacagggcttcaatt
gcggctggtgccgagccagagatactcgttaacacgaatctggtcagtccagagggtctg
gcggtggacgtcaaacgcaggttgatgttctgggttgactcaaacccggacatgatcgaa
agcgccaacctggacggcagtgggaggaagacgctgttcggcacagacctggtcaaccct
cgagccatcatcgtggtctcttccaccagtactctgtactggacggattggaaccgagag
gctccgaagatcgagagtgcatcggtggacggacagaaccgcaaggtggtagtgtctgac
ggcatcggtttgccgaacgctctcacgtacgactcttcttctggacaagtctgctgggct
gacgcaggtacaaagcgcttagagtgcgtatccccagacggttcgggccgaagagtggtc
caccccagcctcaactacccgttcagcatggtctactacaggaaccacttctactacact
gactggaggagggacggagtgatcgcggtgagcaaagacagcggccaaatcactgacgag
tacctgcccgaccagcgctctcatctgtacggcatcgccatagcaaccacccactgtcac
gtgtaa
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integrated database retrieval system