Cyclopterus lumpus (lumpfish): 117740375
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Entry
117740375 CDS
T09199
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like isoform X1
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00512
Mucin type O-glycan biosynthesis
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
117740375
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117740375
Glycosyltransferases [BR:
clum01003
]
Glycan extension
O-Glycan
117740375
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Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
117740375
NCBI-ProteinID:
XP_034402636
Ensembl:
ENSCLMG00005018715
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Position
12:complement(4339299..4342320)
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AA seq
436 aa
AA seq
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MKAPSSRFFCNRRMTTRCAIYSFFLLSLTLCVLLSVRMKHSDFTELPPPPALSIQLFHKY
NINCLAVYDMDPVEVGKSMVIRRNPVVEDKEGNLLNLTADCPLFIKSRGYDDVCVSEEEK
DFPLAYSLVVHKFAPMVERLLKALYSPTNIYCIHYDQKSPAPFISAMEALARCLPNVFIA
SKRESVFYGSVSRLKADLNCLSDLLASDVKWKYVINVCGQDFPLRSNVELVSELRGLNGA
NMLETCRPSESKKQRFSFHHELRDADFEYGKLPVKTERAKSPPPHGIEVFSGNAYFVLSR
DFVAHADSSVVAKDFLAWSEDTFSPDEHFWATLVRLPGVPGEVPRSQPDITDLMSKTRLV
KWQYLEESLYPPCSGTHVRSVCVYGAAETRWLLNYGHWFANKFDPDVDPVVIQCLEEKLE
EKQKLFHMASHACHKG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccccctcttctcgtttcttctgcaatcgcagaatgaccaccagatgtgccatt
tattccttcttcctcctgtcactgactctgtgcgtcctgctgtcagtcaggatgaagcac
agcgacttcacggagcttccccctccaccagcattaagcattcagttatttcacaagtac
aatattaactgtttggctgtgtacgacatggacccggtggaggtgggcaagtcaatggtc
atcagacggaatccagttgtagaggacaaggagggaaatctgctcaacctcaccgcagac
tgcccgttgttcatcaagtccagaggttacgacgacgtgtgcgtctccgaggaggagaaa
gactttcctcttgcttactcattggttgtgcataaattcgccccgatggtagagagactc
ctcaaagctctgtactcacccacaaacatctactgtatccactacgaccagaagtctccg
gctccgttcatctcagccatggaggctttggcccgctgtttgcccaacgtcttcatcgcc
tccaagcgagagtccgtcttctacgggagcgtcagtcgactgaaagccgacctcaactgc
ctgtccgaccttttggcgtcggacgtcaagtggaagtacgtcatcaacgtctgcgggcag
gatttccccctcaggtccaacgtcgagctggtgtccgagctgcgggggttgaacggagcc
aacatgctggagacgtgccgacccagcgagtccaagaagcagcggttctcctttcaccac
gagctgagggacgccgactttgaatacggaaagctgcccgtgaagacggagcgggcgaag
agcccgccgccgcacggcatcgaggtgttctccggcaacgcctacttcgtcttgtcccgg
gacttcgtcgcacacgcggactcctcggtcgtggcgaaagatttcttggcctggtcggag
gacaccttcagcccggacgaacacttctgggccacgctggtgcgactgccgggcgtcccc
ggagaggtacccaggtcgcagccggacatcacggacctgatgagtaagacccggctggtg
aagtggcagtacctggaggagagcctgtacccgccctgctcggggacacacgtccgcagc
gtttgtgtttacggcgcggcggaaacgcgttggttgctcaactacggtcactggttcgcc
aacaagttcgaccccgacgtcgaccccgtcgtcattcagtgcctcgaggagaagctggag
gaaaaacaaaagctgttccacatggcctctcacgcctgccataagggttaa
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