Cyclopterus lumpus (lumpfish): 117740417
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Entry
117740417 CDS
T09199
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117740417 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117740417 (myo5b)
04131 Membrane trafficking [BR:
clum04131
]
117740417 (myo5b)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117740417 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117740417 (myo5b)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117740417 (myo5b)
mRNA cycle factors
P-body specific factors
117740417 (myo5b)
Membrane trafficking [BR:
clum04131
]
Others
Actin-binding proteins
Myosins
117740417 (myo5b)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117740417 (myo5b)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117740417 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
Ac76
AAA_16
INTS5_N
Motif
Other DBs
NCBI-GeneID:
117740417
NCBI-ProteinID:
XP_034402698
Ensembl:
ENSCLMG00005010955
LinkDB
All DBs
Position
12:649400..688137
Genome browser
AA seq
1820 aa
AA seq
DB search
MASDYYPYSKFTRVWIPDPDDVWKAAEIVRDYKEGEPVLHLKLEDETPLEYPVGPKGNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYEQLHIY
GEEVIRAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSTSDTNVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANM
RTYLLEKSRVVFQAEEERNYHIFYQLCASASSPEFKDLGLTSAEDFTFTSMGENIFIEGV
NDAQDLEKTREAFTLLGIKDASQSSLFKVVASILHLGNIDILVDRSGDSCHVSKDDLHLQ
HFCRLLGVELKQMEHWLCHRKLVTASETYVKNMSSKQAENARDALAKLIYARMFDWIVQH
INKALHTTAKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KELIPWTLIDFYDNQPCIDLIEARLGVLDLLDEECKVPKGTDQNWAQKLYKQHSSSVHFQ
KPRMSNISFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASEFQLVADLFHDKDDVA
PQKSSRVNVRPAKPTPRGPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDFKE
AFSFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLLKKSDMTADRKLVCK
NLLETLIKESDMFQFGKTKIFFRAGQVAYLEKLRADRFRSACIKIQKTVRGWLQRVRYRK
VRKMAVTLQRYGRGYLARRHADFLRLSRATLICQKQFRMVRDRRAFLRERRAVVTIQAFT
RGMFTRRIYQEFLLHHKAQVIQKTVRGWLQRRRFLRARGAAVTVQCAFRQLLARRRLQQL
KVEARSAERLKKLNTGMENKIVQLQRKMDDQSKELRTQNDQLLQVNTGLGSEVNKLQKQL
EQVKSRQVGGARGGAQISSLQEELDKLREELQEASAQRKRMEEDHGNEKMGLQQRVEQLE
AENALLKRDKEEMNQKMLQQARISGEGSSSEAQAALQKELDDERQRYQNHLKEFTRLEQR
YDNLKEELSLSKFQPGHRRNPSNLSSLESDSNYTSISTSEVGDTEDSIQLVEEMGVEKAA
MDIGLFMKLQKRVRELEQERKRLQVNLDKMEELAKRRESESRSSPSEQEMADQAYNNLKR
EELESENKKLKNNLNELRKSIADRASQNDSSNELQDGYNLLLSQLRSANEELDGRKEEVL
ILRTQIVSAAQQQENKELEESSKVPEVNNSNEPVDKEEAAKAYHGLCESKKLLEAQLQTQ
SRQHKDELEALHTQIELLRDDIEKKQELLNYTAALSPEARVEYSVQQEITRLTNDNLDLK
ELVEKLEKNERKLKKQLRIYMKKVQELEVAQAAAQTSRSRPELSRQVTVQRKEKDFEGML
EYYKEDEALLFKTLITDIRPTTVGATVPCLPAYILFMCIRHADYVNADQKVESLLTSTIN
SIKKVLKKNNEDFEMTSFWLANTSRLLHCLKQYSGDEVFMTQNTGKQNEHCLKNFDLAEY
RQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDINGG
PTSYTLQALIRQLGQFYATMQDHGLDPEIVGQVVRQLFHCINVFTLNNLLLRKDVCSWST
GMQLRYNTSQMEEWLRGNNLFQSKAAATLKPVIQAAQLLQVKKKTTQDAEAICSLCTALS
TQQIVKILNLYTPLNEFEERVTVSFIRSIQNRPPQSTDPPQLLMDTKHMFPVLFPYTPSA
LSLETLHIPASLGLDFLVRV
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgactactacccctactccaagttcacgcgggtctggatccccgaccccgac
gacgtgtggaaggctgcagagatcgtcagagactacaaagaaggggagccggtgcttcac
ctcaaactggaggatgaaacgcctctggagtaccccgtgggtcccaaggggaaccccctt
ccgttcctgcgtaaccccgacatcctggtgggcgagaacgacctcacggctctcagctac
ctgcacgaacctgcagtcctgcacaacctcaaggtccgcttcctggagcccaaccacatc
tacacgtactgcggcattgtgctggtggccatcaacccgtatgagcagctgcacatctat
ggagaggaggtgatccgggcctacagcgggcagaacatgggcgacatggacccgcacatc
ttcgccgtggctgaggaggcctacaagcagatggccagagacgagaggaaccagtccatc
atcgtgagcggagaatccggagccggaaagacggtttcggcaaagtacgccatgcggttc
tttgccacggtgggcggctccaccagcgacaccaacgtggaggagaaggtgctcgcctcc
aaccccatcatggaggccatcggcaacgccaagaccactcgcaacgacaacagcagccgc
ttcggcaagtacatccagatcggcttcagccggcattaccacatcatcggagccaacatg
aggacctacctgctggagaagtcccgcgtggtgtttcaggcggaggaagagaggaactat
cacatcttctaccagctgtgtgcctccgccagctcaccagagttcaaagacctcggcctc
accagcgcagaggatttcaccttcacgtcgatgggagagaacatcttcatcgagggcgtg
aacgacgctcaggacctggagaagaccagggaggccttcacgctgctggggatcaaggac
gccagtcagagcagcctcttcaaggtggtcgcctccatccttcacctgggcaacatcgac
atcctcgtggatcgaagcggagactcctgccacgtctcgaaggacgacctccacctgcag
cacttctgcaggctgctgggggtggagcttaagcagatggagcactggctctgtcacagg
aagctggtcaccgcctcggagacgtacgtgaagaacatgtccagcaagcaggcggagaac
gcccgcgacgcgctggccaagctcatctacgcccgcatgttcgactggatcgtgcagcac
atcaacaaggcgctgcacaccaccgccaagcagcactccttcatcggggtgctggacatc
tacggcttcgagaccttcgaggtgaacagcttcgagcagttctgcatcaactacgccaac
gagaagctccagcagcagttcaactctcatgtgttcaagttggagcaggaggagtacatg
aaggagctgatcccctggaccctcatagacttctacgataaccagccctgcatagacctg
atcgaggctcgactcggggtcctggacctgctggacgaagagtgtaaagtgccgaagggg
acggaccagaactgggcccagaagctctacaagcagcactccagcagtgttcacttccag
aagcctcgcatgtccaacatctccttcatcatcatccacttcgctgacaaggttgagtat
cagtgtgaaggctttctggagaagaacagggacaccgtgtatgaggagcagatcaacatc
ctgaaggccagtgagtttcagctggttgcagatctgtttcatgacaaggacgacgtggcc
ccccagaagtcctccagagtgaacgtcagaccagcaaagccgactcccaggggccccaac
aaagagcacaggaagaccgtggggcatcagttccgcagctccctgcacctcctcatggag
accctgaacgctacgactcctcactacgtccgctgcatcaaacccaacgacttcaaggag
gcgttctcgttcgattccaagcgtgcggtgcagcagctccgagcttgcggagttctggag
acgatccggatcagtgcagccgggtacccgtccaggtggacgtacccagacttcttcagc
cggtaccgagtgttgctgaagaagtctgacatgacagccgacaggaagctggtgtgtaag
aacctgctggagacgctgatcaaggaatccgacatgttccagttcgggaagacgaagatc
ttcttccgggcggggcaggtagcgtacctggagaagctccgggccgaccggttccgctcg
gcctgcatcaagatccagaagacggtgcggggctggctgcagagggttcgataccgcaag
gtccgcaagatggccgtcacgctgcagagatacggccgaggatacctggcccgcagacac
gctgacttcctgcgtctgagccgagccaccctcatctgtcagaaacagttccgcatggtg
agagacagacgggcatttctgagagagagacgggcagtcgtcaccatccaggccttcacc
agagggatgttcacccgccggatctaccaggagttcctgctccaccacaaggcccaggtg
atccagaagacggtgcgtggctggctccagaggaggcgcttcctgcgtgcccgcggtgca
gccgtcaccgtgcagtgcgccttcaggcagctgctcgccaggcggcggctgcagcagctg
aaggtggaggctcggtccgccgagcggctgaagaagctcaacacgggcatggagaacaag
atcgtccagctgcagaggaagatggacgaccagtccaaagagctccggacgcagaacgac
cagctgctgcaggtgaacaccggtttgggctcggaggtgaacaagctgcagaaacagctg
gagcaggtgaagagtcggcaggtaggaggagcaagaggaggagctcagatctcctccctg
caggaggagctggacaagctgagggaggagctacaggaggcatcggcccagaggaagagg
atggaggaggaccacggcaacgagaagatgggtctccaacagagggtggagcagctggag
gcagagaacgctctgctgaagagggacaaagaagagatgaaccagaagatgctgcagcaa
gccaggatctctggagagggcagcagcagcgaggctcaagcggcgctgcagaaggagctg
gacgatgagaggcagcggtaccagaaccatctcaaggagttcacccgactggagcagcga
tacgacaacctgaaggaggagctgtctctgagcaagttccagcccggccaccggaggaac
ccgtccaacctgagcagcctggagtcggactccaactacacgtccatctccacctcggag
gtcggagacaccgaggactccattcagctggtggaggagatgggagtggagaaggctgcg
atggacatcggtctgttcatgaagctgcagaagagagtcagagagctggagcaggagagg
aagaggctgcaggtcaacctggacaagatggaggagctcgccaagcgcagggagtccgag
tccaggagttccccctccgagcaggagatggctgatcaggcctacaataacctcaagaga
gaggagctggaatcggagaacaagaagctgaagaacaacctgaacgagttgaggaagtcc
atcgccgatcgagcgtctcaaaacgattcttccaacgagctgcaggacggctacaacctg
ctgctcagtcagctccgatcggccaatgaggagctggacggtcgcaaggaggaggtcctt
attctgaggactcagatcgtcagcgccgcccagcaacaggagaacaaggagctcgaggaa
agcagcaaagttcctgaagtgaacaacagcaacgagccggtggataaagaggaggcggcc
aaagcctatcacggactgtgtgagtccaaaaagctgctggaggctcagctgcagactcag
tccaggcagcacaaagacgagctggaggctcttcacacccagatcgagctgctgcgagac
gacatcgagaagaagcaggagctcctgaactacacggcggcgctgtcgccggaggctcgc
gtggagtacagcgtccagcaggagatcacaaggctcaccaacgacaacctggacctcaag
gagctggtggagaaactggagaagaacgagaggaaactgaagaagcagctcaggatctac
atgaagaaagtccaggagttggaagtggctcaggctgcagctcagaccagcaggtccaga
cctgaactgagtcgccaggtcacggtccagaggaaagagaaggactttgaggggatgctg
gagtactacaaggaggacgaggccctgctcttcaaaaccctgatcacagacatcagaccc
accacggtgggggctacggttccctgtctgccggcttacatcctcttcatgtgcatccgc
cacgccgactacgtcaacgccgaccagaaggtggagtctctgctcacctccaccatcaac
tccatcaagaaggtcctgaagaaaaacaacgaggactttgagatgacgtccttctggctg
gccaacaccagccggctgctccactgcctgaagcagtacagcggagatgaggtgttcatg
acccagaacacgggcaaacagaacgaacactgcctgaagaacttcgacctggccgagtac
cgacaggtgctgagcgacctctccatccagatctaccagcagctcatcaaggtggccgag
ggcatcatccagcccatgatcgtgtcggccatgttggaaagtgagagcatccccagcctg
gcgggagtcaaaccgatgggctacaggaaccgctcgtccagcatggacatcaatggcggc
cccaccagctacaccctgcaggccctgatccggcagctgggtcagttctacgccaccatg
caggaccacggtctggaccccgagatcgtgggtcaggtggtgcgacagctcttccactgc
atcaacgtcttcaccctcaacaacctgctgctgcggaaagacgtgtgctcctggagcacc
ggcatgcagctcagatacaacaccagtcagatggaggagtggctgagggggaacaacctt
ttccagagtaaagctgcagccaccctgaagcccgtcatccaggccgctcagctgctgcag
gtcaagaagaagacgactcaggacgccgaggccatctgctcgctctgcaccgccctcagc
acgcagcagatcgtgaagatcctgaacctctacactcctctgaacgagtttgaagagaga
gtcaccgtgtccttcatcaggagcatccagaaccgtcctccgcagagcaccgacccgcct
cagctgctcatggacaccaagcacatgttccccgtcctcttcccgtacacgccgtccgct
ctcagcctggagacgctgcacatccccgcctccctcggcctagacttcctcgtcagggtc
tga
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integrated database retrieval system
