Cyclopterus lumpus (lumpfish): 117740461
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Entry
117740461 CDS
T09199
Symbol
rnf165a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117740461 (rnf165a)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117740461 (rnf165a)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117740461 (rnf165a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
RINGv
zf-RING_16
Prok-RING_4
zf-RING_10
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117740461
NCBI-ProteinID:
XP_034402776
Ensembl:
ENSCLMG00005020736
LinkDB
All DBs
Position
12:complement(6095063..6105442)
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AA seq
350 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGAHFTRHQHSHATSCRHFALGAPQAPISAEFPLGHASQPP
QTGLAPHLSPHLPPAHHPPLTTLPAPPQFQDVPGPPFLPQALHQQYLIQQQLLEAQHRRI
LPHSRRTQERIPLNPHRLRSGYEFSPPLHVPQQMTQQQRYLAEGTDWDLSVDAGLPHHQY
QLQQLPQHYQHYLASPRMHHFPRNTSSAQVVVHEIRNYPYPQLHLLALQSLNPSRHATAV
RESYEELLQLEDRLGSVSRGAVQTTIERFTFPHKYKKRKPLLLKIEEEEEETDVDEKCTI
CLSMLEDAEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLNPDS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtacatgttggatatctggttctccccgtcttcggctcagttagaaataga
ggagcacacttcaccaggcatcaacacagccatgctacctcctgccgacactttgccctg
ggcgctccccaggcacccatctcagcagagttccctctgggacacgccagccagccacct
cagaccggtcttgccccccacctttccccccacctgcccccggcacaccacccgcccctc
actaccctgcccgcaccccctcagttccaggatgtgccggggcctccattcctacctcag
gccttacaccagcaatacctcatacagcagcagcttcttgaagcgcagcaccgcaggatc
ctcccgcactccagaagaacccaggagcgtattcccctgaaccctcaccgactgcgctcg
ggctacgagttctcccctcccctccacgttccccagcaaatgacacagcagcagcggtac
ctggccgaaggcaccgactgggatctcagtgttgatgctggcctccctcaccaccagtac
cagctccagcagcttccacagcactatcagcattacctggcctcccctcgaatgcaccac
ttccccaggaacacatcctctgcacaagtggttgtgcatgaaatcagaaactacccgtac
ccccagctgcacctgttggccctgcaaagtctgaatccttcgaggcacgccaccgccgtg
cgagaaagttacgaggagctgttgcagctggaggaccggctggggagtgtcagcagagga
gcggttcagacgaccatagagcgattcaccttcccacacaaatacaagaagaggaagccc
ctgctgctgaagattgaggaggaggaggaggaaacagatgtggatgagaaatgcaccatc
tgtttgtccatgctggaggacgcagaggacgtcaggagattgccctgcatgcacctcttc
caccagggctgcgtggaccaatggctggccaccagccgaaagtgtccgatctgtcgagtt
gacatcgaaacacagctgaaccctgacagctga
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integrated database retrieval system
