Cyclopterus lumpus (lumpfish): 117740474
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Entry
117740474 CDS
T09199
Symbol
chsy3
Name
(RefSeq) chondroitin sulfate synthase 3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
clum01100
Metabolic pathways
Module
clum_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117740474 (chsy3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117740474 (chsy3)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117740474 (chsy3)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
117740474 (chsy3)
Glycosyltransferases [BR:
clum01003
]
Glycan extension
O-Glycan
117740474 (chsy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Glycos_transf_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
117740474
NCBI-ProteinID:
XP_034402792
Ensembl:
ENSCLMG00005022136
LinkDB
All DBs
Position
12:complement(19273361..19280804)
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AA seq
810 aa
AA seq
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MAVKSRRPWTTVVFGVFLGFTLSSWLIVPQVLEGKGKKSPVCSHYSESSVGKGPAILGNA
AAVQDRDSPQVSREEDGVFGTGNSSGDTGRPVSKPKRFLYVGVMTAKKYVRSRAVAAYQT
WVSSIPGKVEFFSSAGTGAVHVPVPVPVVSLADVDDSYPPQKKSFMMLKYIHDHYLDKYE
WFMRADDDAYIRGEKLELFLRSLNSSKPLYLGQTGLGMAEELGRLALEPGENFCMGGPGM
IFSREVLRRMVPHIGTCLREMYTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFYENYEHNK
KGFIEKLHSSKIHNAITLHPNKKPAYQYRLHSFLLSREISRLCYRSILLHRQGLVMSYLS
DTEVLWQDQQLGSPPSYMRYKPNERNNVIEWDFLTGRHIYSAAENKVVRQSLGNSLRTAL
EDIILQVMEMINENSKTRGRAIDFKEIQYGYYRVDPMHGAEYIVDLLLLYKKHKGRKITV
PVRRHAYLQQSFSRPFFTETDKLDVAELVAAINSESQSLSFLSNSLKFLSPFQVYESNRE
LWEQSQRKVHILVPLSGRYDTFVRFMQNFEKVCLIPKQNVKLSIILVDNGSDPNRGKHDQ
LIRDYDRKYPKADLSIIPMTGNFSRGLALELGSSQLDNDSLLFFCDVDLIFTGDALQRCR
ENAVQGRQVYFPVVFSQYNPKIVYSEKAPRDNQFVLTKKSGFWRDYGFGITCVFKGDLLK
AGGFDTSILGWGLEDVDLFTKVINSGLKVLRSQEPGLVHVYHPVQCNTSLEQRQHKMCLG
SRASTFASRMQLAELWLEKHMEAGYNRTSS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaaatcaaggagaccgtggacgaccgtggttttcggcgtcttcctgggattc
accttgtcctcttggctcatcgtgcctcaggttctggagggtaaagggaagaaatctccc
gtgtgttcgcactacagcgagtcctccgtcggtaaaggtccggccatcctcgggaacgcc
gcggctgtccaagaccgggacagcccgcaggtcagccgggaggaggacggggtattcggt
accggaaacagtagcggggacaccgggagacccgtcagcaaaccgaagcgtttcctctac
gtcggcgtgatgacagcgaaaaagtacgtgcggtcccgcgccgtggccgcgtaccagacc
tgggtgagctccatacccgggaaggtggagttcttttcaagcgctgggaccggcgccgtc
cacgtgcccgtgcccgtcccggtggtctcgctggcggatgtggacgactcctacccgcca
cagaagaagtcattcatgatgctgaagtacatccacgaccactacctggataaatacgag
tggttcatgcgcgcggatgatgacgcttatataagaggtgagaagctggagttgttcctg
cggtcgctgaacagcagcaagccgctctatctgggccagacgggcctgggcatggccgag
gagctgggcagactggccctcgagcccggagagaacttctgcatggggggccctgggatg
atcttcagcagggaggttctccggaggatggtccctcacatcggtacctgtctgagggag
atgtacaccacccacgaggacgtggaggtgggccgctgtgtgcggcgctttggagggacg
cagtgtgtgtggtcatatgagatgcagcagcttttttatgagaactacgaacacaacaag
aaaggttttattgagaaacttcacagtagcaagatccacaatgccattacacttcacccc
aacaagaagcccgcctaccagtaccggctccacagcttcctgctgagccgtgagatctcc
aggctttgttaccgcagcatcctgctccaccgccaaggcctggtcatgagttacctcagt
gatacagaagtgctatggcaggaccagcagctgggctccccaccttcctacatgcgctac
aagcccaatgagagaaacaatgtcatcgagtgggacttcctgactggccgccatatttac
tccgctgctgaaaacaaggtggtcaggcaaagcctcgggaactcgcttcggaccgcgctc
gaagacatcattctccaggtcatggagatgattaacgagaattcaaaaactcgtggccgt
gcaattgactttaaagagattcagtacggctactacagggtggatccaatgcatggcgca
gaatacattgtagatttattgcttctgtacaagaaacacaagggacgtaagataactgtg
cctgtgcggcggcacgcttaccttcagcaatcgttcagccgacccttctttaccgaaact
gacaagctagacgtggctgagctggtggctgccatcaactctgaatcccaatccctttct
ttcctatccaactctctgaagttcttgtcacctttccaggtctatgaatcaaacagggaa
ctgtgggagcagagccagaggaaagtccacatccttgtcccattatccggtcgctatgac
accttcgtccgcttcatgcagaactttgagaaggtgtgtttgatacccaaacaaaatgta
aagctctccatcattctggtggacaatgggagcgatccgaaccgaggcaaacacgatcag
ttaatccgagactacgacaggaaatatcccaaagctgacctgtccataatccccatgacg
ggcaacttctcacgaggactggctcttgagctgggctcctcgcagcttgataacgactcc
ctgctcttcttctgcgatgttgatcttatctttactggtgatgctttgcagcgctgcaga
gaaaacgctgtccaagggagacaagtctatttcccagttgtctttagtcagtacaacccc
aagatagtttactctgagaaggccccgagagacaaccaatttgtgctgaccaagaaaagt
ggtttctggcgagattacggattcggaatcacttgtgttttcaagggtgacttactaaaa
gccggaggtttcgacacctcaatcttaggctggggactggaagatgtagacttgttcaca
aaagtgatcaactctggtttaaaagtgttgcgcagtcaggaaccgggtctcgtccacgtc
tatcatccggtccaatgcaacacgagtctcgagcagaggcaacacaaaatgtgcctcggc
tcgagagcgagcacgtttgcatcgagaatgcagttagctgagctgtggctggagaaacac
atggaggcggggtacaacagaacttcatcctga
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