Cyclopterus lumpus (lumpfish): 117740511
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Entry
117740511 CDS
T09199
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a
KO
K24901
homeobox protein orthopedia
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117740511 (otpa)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117740511 (otpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
TraT
PRC2_EED_ins
baeRF_family12
Motif
Other DBs
NCBI-GeneID:
117740511
NCBI-ProteinID:
XP_034402852
Ensembl:
ENSCLMG00005004607
LinkDB
All DBs
Position
12:complement(4522126..4526947)
Genome browser
AA seq
331 aa
AA seq
DB search
MLSHADLLDARLGMKDAAAELLGHREALKCRLGGGGPDPGHSGGELGPGSDGVEGATMLP
GDDISGGGGGGSNAVQVNSKEQEKQNNNNNSSSNNNNNQSGGGQQSQSQSQKQKRHRTRF
TPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRS
PGTLLPTHHHGLSQFPSAAAAAVAMGDSLCSFHANDTRWATAGMPGVSQLQLPPSLGRQQ
AMAQSLSQCSLGAGQPHNSMGLSNMSNGSGLQSHLYQPTFPGMVPASLSGPTNMTHSPQL
CSSPESEVWRGTSIASLRRKALEHTVSMSFT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgctatctcatgccgacctcctggatgctcgcctcgggatgaaggacgccgccgcggag
cttctgggccacagggaggctctgaagtgccggctcggcggaggggggcccgaccccgga
cactccgggggggagctcggcccgggctcggacggcgttgaaggagccacgatgctcccg
ggcgacgacatcagcggcggcggaggcggaggatccaacgcggtgcaggtgaacagcaaa
gagcaggagaagcagaacaacaacaacaacagcagcagcaacaacaacaacaaccagtct
ggaggagggcaacagagccagagccagagccagaaacagaagcggcaccggacccgcttc
accccggcgcagctcaacgagctggagaggagcttcgccaaaacgcactacccggacatc
ttcatgcgggaggagctcgcgctgaggatcggcctcacggagtcgcgcgtgcaggtctgg
tttcagaaccgacgcgccaagtggaagaagcgcaagaagaccaccaacgtcttccggtct
ccggggaccctgctgccaacgcaccaccacggcctgtctcagttcccgtccgcggcggcg
gcggccgtggccatgggcgacagcctgtgctccttccacgccaacgacacccgctgggcc
acggcggggatgcccggcgtgtctcagctgcagctccccccgtccctgggccgccagcag
gccatggcgcagtcgctgtcccagtgcagcctgggcgccgggcagccgcacaactccatg
ggtctgtccaacatgtcgaacggctccgggcttcagtcgcacctctaccagcccactttc
cccgggatggtgcccgcgtccctctcgggccccaccaacatgacccactcgcctcagctg
tgcagctccccggagagtgaggtgtggagagggacaagcatcgcgtcgctgcgccgcaaa
gcgctggagcacacagtgtccatgagcttcacctag
DBGET
integrated database retrieval system
