Cyclopterus lumpus (lumpfish): 117740512
Help
Entry
117740512 CDS
T09199
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117740512 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117740512 (lamc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
117740512
NCBI-ProteinID:
XP_034402853
LinkDB
All DBs
Position
12:complement(787061..897759)
Genome browser
AA seq
1661 aa
AA seq
DB search
MGASFAMSSLLLLLCVHPHRHLLAWAAMDSCVDEDGAPSRCMPKFENVAFNRTVVTSNTC
GSPPEDYCMQTGSTRSCHHCDASEPDRSHNAGLLTDFHRNEEPTWWQSQSMYYGIQHPSS
VNLTLHLGKAFEITYVRLKFYTSRPESFAIYKRTEVDGPWSPYQLYSASCRKTYGKDPKA
FLRPGDDERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSVVLKEWVTATDLLIS
LDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVYQDQRGQDQDQRGQDQ
DQRGLVCSCQHHTVGDDCQRCHPSYRDRPWTRATGDSANECLKCNCSGRSEECEFDMEQY
RSTGSGGRCVSCRDHTAGPHCERCRENHHRGSAEEPCRPCNCNVNGSVGLQCDAGGRCVC
RVGVTGETCDTCRAGFHSLGHGGCRPCDCDPGGSVDDCSPVDGGCRCKPNVEGQSCDRCK
PGFFDLQRVNPAGCQACFCFGHSLACSSSNQHTAVGITSDFIEDQDGWLGEFSGGQEYPL
LWKEGEVFLLPLTEEDIGFYKAPEKFLGHQVYSYGQLLSITFTSETAELLPDHVTLLLRG
SGASLSADLSPRPGLDRDLAARRSFVVRLHENEMRFKPPSSAFEFQQVLQNLTALRISNA
GGPNYTSALSEVTLTSASPSSGPADPPAPWVESCFCPSGFSGQLCERCAPGFTREASGGG
PLSACVPCDCHRHGACHPETGACECSDFTAGRTCERCLDGYYGNALIGTPGDCRPCPCPD
RTSCAEIAATGQVVCTNCPTGQTGMRCQMCEDGYHGDPLGQSGEAQRCVRCDCHGNVDSN
ALGTCDRTTGRCLKCLRHTEGDRCQRCQRGYYGNALSQTAGHKCQPCGCDPGGTSEPRDE
CHPHTGACRCLGHVTRRDCSHCEVGFFNLQPAVGCERCKCNPIGSSSIACHPITGQCVCR
AGVEGTLCGSCREGFFGFSSRGCRACNCDPMGSSSMQCHGNGTCLCRRGFVGYKCDKCEV
NFFQSRDTHQCEACPACYGLVQKQAEETRTRLQHLEKLLAHLDCRGRFGRRGHMVLPLRP
EHQREDALPNALEEFLAFQEAREAFINQFSSLEASTGTLSAQLHAITATLNCSVTEEEEE
EGRRKDGGSRAACRTFTETMSVVTASQKQLKRATLDLDRMIFPFEVLSEPNKWNMLVNDS
QALMKSHIEAADHIEATASRAARASEQTLGLLMDLLQDNSTEEYIRKLTEQITQMQQLKE
NLTAQVDETAAEQLVLEEEAAGLQLVLEEEAAGLQLVLEEEAAGLQLVLEEEAAGLQLVL
GTITSDTSPSAPELNQTHTTNRRAERGEDLLKRKEELDKQIQSKDNLISKIGEGVEPLKH
TARKQLQAVGDISQLRAHAQGAKVTALSSVVTGKEVESAAIVLHRELEYMAREWPRRQTQ
TRTALKKERPLQDKVLADVRKRVSQIEKTLKPALENLNLNTTKEAEQTAHAVAKESKAIL
IQAKHTRTASAHLSSHIDSALQQLAEQEMHTDTVTSQISQQPEASLTSVMEDMEAAKLQL
KAYSVTLTQLISKIDGNVPLERFDRILDETARRLSTLRGSVESPTLGSKIQKLKSATKEQ
HSRMSFIEQDLQEIREERDSLRDIALNLPPSCPQATGAGSG
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatcctttgccatgagctctcttctcctgctgctctgtgtccatcctcaccgc
cacctcctcgcctgggccgccatggactcctgcgtggacgaggatggcgccccgagccgc
tgcatgcccaagtttgagaacgttgccttcaaccgcactgtggtgacgtccaacacgtgc
ggctccccgcccgaagactactgcatgcagaccggctccacgcgctcgtgccaccactgc
gacgcgtccgagccggaccggagccacaacgccggcctcctgacggacttccacaggaac
gaggagcccacgtggtggcagagccagtccatgtactacggcatccagcaccccagttcg
gtcaacctcaccctccacctgggaaaggcctttgagataacttacgtacgcttgaagttc
tacaccagccggccggagagcttcgccatctacaagcgcacggaagtagacgggccctgg
tctccttaccagctgtacagcgcctcctgtaggaagacctacgggaaggaccccaaggcc
ttcctccgccccggagacgatgagaggacggcgttgtgcacggatgaattcagtgacatc
tcccccctcactgggggcaacgtggcgttctccaccctggagggccggcccagtgcctac
aacttcgaccagagcgtggtgctgaaggaatgggtgacggccacggacctgctcatctct
ttggaccggctgaacacctttggagacgagttcttcaaggacgccaaagtgttgcgctcg
tacttctacgccatctctgatttctctgtgggaggcaggtgtaagtgcaacggtcacgcc
agcgagtgcgtgtaccaggaccagaggggccaggaccaggaccaacggggccaggaccag
gaccagcggggtctggtgtgctcctgccagcatcacacggtgggagacgactgccagagg
tgtcacccctcctaccgggaccggccctggaccagggccaccggggactcggccaacgag
tgtctgaagtgcaactgcagcgggcggtcagaggagtgtgagttcgacatggagcagtac
cgcagcaccggcagtggggggcgctgtgtgagctgcagagaccacaccgccgggccccat
tgtgagcgctgcagggagaaccaccacagggggtctgcggaggagccctgccggccatgc
aactgcaacgtcaacggttcagtggggctgcagtgcgatgcaggaggaaggtgtgtgtgt
cgtgtcggcgtgacgggggagacgtgtgacacgtgtcgggccggattccactcgctcggc
cacggcggctgcaggccgtgtgactgtgaccccggggggagcgtggacgactgctctcct
gtggatggaggctgtcgctgtaagcccaacgtggaggggcagagctgcgacagatgcaag
ccaggttttttcgacctacaacgagtgaacccggccggatgccaagcgtgtttctgcttc
ggccactcgctggcctgctcctcgtccaatcagcacactgctgtcggcatcacttctgac
ttcatcgaagatcaggacggctggctgggagagttctccggggggcaggagtaccccctg
ctgtggaaggaaggggaagtcttcctgcttcctctcaccgaggaagacatcggcttctac
aaagcccccgagaagttcctgggtcatcaagtctacagctacggccagctcctctccatc
accttcacctctgagaccgccgagctgctccccgaccacgtcaccttgctcctccggggc
tccggagcctccctctccgctgacctttcaccccgacccgggctcgaccgtgacctcgcg
gcgcggcgctccttcgttgtcaggcttcatgaaaatgagatgaggttcaaacctccatcg
tctgcctttgagttccaacaagtccttcagaacctgacggctctcagaatcagcaacgcc
ggaggacccaactacacgtcggcgctgtcggaggtcaccctgacctcggcttccccgtcc
tccgggccggccgaccctccggccccgtgggtggagtcttgtttctgtccgtcggggttc
tccgggcagctttgcgagcgctgtgctccgggattcacccgggaagcctccggcggaggg
ccgctctcggcttgtgtgccatgcgactgccaccggcatggagcctgtcatccagagaca
ggtgcctgcgagtgctcagacttcaccgcggggaggacctgcgagcgatgcctggacggt
tactacggcaacgctttgattggcacgcccggtgactgccggccgtgcccttgcccggac
cgtaccagctgtgccgagatcgcggcgacgggacaggtggtctgtaccaactgccccacg
ggacagacagggatgcgctgtcagatgtgtgaggatggttaccatggggaccccctggga
caatctggtgaagctcaacggtgcgtgagatgcgactgccacggcaacgtggactccaac
gcgctgggaacgtgcgaccgcacgactggccgatgtctgaaatgtctgcggcacaccgag
ggcgaccggtgccagcgctgccagcggggttactacggcaacgctctgagccagacggcc
ggccacaagtgccagccgtgcggctgcgatcctggaggaacctccgagccccgggatgaa
tgccaccctcacactggagcgtgccggtgcctcggtcacgtgacccgacgggactgcagc
cactgtgaggtcggcttcttcaacctgcagccggctgtcgggtgtgagaggtgcaagtgc
aatcccattggctcgtcgtccatcgcctgtcatccaatcacagggcagtgtgtgtgtcgt
gccggggtggagggcacactgtgtggttcctgccgcgagggcttctttggattctcgtca
cgaggttgcagagcctgtaactgtgacccgatgggctcctcctcgatgcagtgtcatggt
aacggtacctgtctctgccgccgaggcttcgtgggttacaagtgtgacaaatgtgaggtg
aacttcttccagagcagagacacccaccagtgtgaggcgtgcccggcctgctacggcctc
gtccagaaacaggcagaagagacgaggacccgcctgcagcatctggagaagctgctggct
cacttggattgccgaggtagatttgggaggcggggtcacatggtcctccctctgcggccc
gagcaccagagggaggacgcgctacccaacgccctggaggagttcctggccttccaagaa
gctcgggaggccttcataaaccagttctcctccctggaggcgtccacgggcacgctctcc
gcccagctgcacgccatcacggccaccttgaactgcagcgtgacggaggaagaggaagag
gaggggaggaggaaggatggaggaagcagggccgcctgtcggaccttcacagaaaccatg
tctgtggtcacagcgtctcagaaacagctgaagcgggccacgctggacctggaccgcatg
atctttccttttgaggtgctgtcagagcccaacaaatggaacatgttggtcaacgactcc
caagccctcatgaaaagtcacatagaagcagcagaccacattgaggccacagccagccgg
gcggcccgagcctcggagcagaccttgggtctcctgatggatcttctgcaggacaactcc
acagaggagtacatcaggaagctgacggagcaaataactcaaatgcagcagctgaaggag
aacctgacggcacaggtggatgaaacggcagccgagcagctggtcctggaggaggaagct
gctggtctacagctggtcctggaggaggaagctgctggtctacagctggtcctggaggag
gaagctgctggtctacagctggtcctggaggaggaagctgctggtctacagctggtcctg
ggtaccatcacatccgacaccagcccgtcagcaccagagctcaaccaaacgcatacgacc
aacaggagagcagagcggggcgaggacctgctaaaacgaaaagaagaactggacaagcaa
attcagagcaaagacaacctcatcagtaagatcggagagggggtggagcctctcaaacac
accgccaggaagcagctgcaagccgtgggagacatcagccagctgcgagctcacgctcaa
ggggcaaaggtcacggctttgtcgtccgtggtgacggggaaagaggtggagtctgccgcc
atcgtcctgcacagagaactcgagtacatggcgcgggagtggccccgtcggcagacccag
accaggacggccctgaagaaggaaagaccactgcaggacaaggttctggctgacgtccgc
aaaagggtctcgcagatcgagaagacgctcaaaccggcgctggaaaacctgaacctcaac
accacaaaggaggcggagcagacggcgcacgctgtggcaaaggagtccaaagccattctg
atccaggccaagcacaccaggactgcatctgctcacctgagctcccacatagactctgct
ttacagcagctggctgagcaggagatgcacactgacacagtcacctcccagatcagccaa
cagccggaggcgtccctgaccagcgtcatggaggacatggaagcagccaagctccagtta
aaggcctattctgttacactaacccagctaatcagcaagattgatgggaacgtgccgctg
gaacgcttcgaccggatcttggatgagacggcgcgccgcctgagcacgcttcgcgggagc
gttgagagcccgacgctgggctccaagatccagaagctgaagtcggccaccaaggagcag
cacagcaggatgtccttcatcgaacaggacttacaggagatccgggaggagagagacagt
ctcagggacatcgctttaaacctgcctccgtcgtgcccccaggccacaggagcaggtagc
ggctag
DBGET
integrated database retrieval system