Cyclopterus lumpus (lumpfish): 117740516
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Entry
117740516 CDS
T09199
Symbol
cntfr
Name
(RefSeq) ciliary neurotrophic factor receptor subunit alpha isoform X1
KO
K05059
ciliary neurotrophic factor receptor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117740516 (cntfr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
clum04050
]
117740516 (cntfr)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117740516 (cntfr)
Cytokine receptors [BR:
clum04050
]
Interleukin receptor families
IL6/12 receptor family
117740516 (cntfr)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Receptors
117740516 (cntfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FN3_IL27B_N
fn3
Ig_DSCAM-DSCAML_C
Ig_3
Ig_5
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
117740516
NCBI-ProteinID:
XP_034402856
Ensembl:
ENSCLMG00005007793
LinkDB
All DBs
Position
12:complement(13767909..13958069)
Genome browser
AA seq
367 aa
AA seq
DB search
MTLLCVCLQMANLVTSLCCVVLAAVVVAYAQRRSQLVARNQYERMGIDVTMQCGSLDNDA
SVSWKVNGTDVKAQHRLEGPRLMLTEVDLGHNGLYSCFQNPHGERRDTIYLHIGIPPREP
TVTCRSNTYPKGFYCSWHQLHPTYIPTTFEVDVQHNQRSLEVQKDPDHKNRCRVRFPEVF
SSFPYKVNVTAVNALGKASTTISFEESSIVKPDPPERVTATPIRFNARRLEVSWQSPATW
PDIDNFPLKYFLRYRPLIKEQWQHVELSDSTSHTITDAYAGKEYIIQVAAKDTEIGTWSD
WSVAVHATPWIEEQITSTTEVDFSTETKTSPIPSSNAPQKAEPPVGRAARLLTFFSPLLL
GMLLLFM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgactctactgtgtgtgtgtctacagatggcaaaccttgtgacatcgctgtgctgtgta
gttctggccgcggtggtggtagcgtacgctcaaagacgcagtcagcttgttgctaggaac
cagtatgagcgaatgggcatcgatgtcaccatgcagtgcggctccctggacaatgacgcg
tcggtgtcatggaaggtgaacgggacagatgtgaaagcccagcaccgtctcgagggtccc
agactgatgctgaccgaagtggacctgggccacaacggactctacagctgctttcagaac
ccgcacggagagaggcgtgacaccatctacctccacatcggcattcctcctcgggagccc
acagtcacctgtcgatccaacacctacccgaaaggcttctactgcagctggcaccaactg
cacccgacgtacatccccaccaccttcgaagtcgacgtacaacacaaccagcgttcactg
gaggtgcagaaagatccagaccacaagaatcgctgtcgtgtacgttttcccgaggtcttc
tccagcttcccctacaaagtgaatgtgacggcagtcaatgctttggggaaagcctcgacc
acaatttcttttgaagagtccagtatagttaaaccggaccccccggagcgcgtgacagcg
accccgattcgtttcaacgcccgcaggctggaggtgtcctggcagagccccgccacctgg
cccgacatcgacaacttccctctgaaatacttcctccgataccggccactcatcaaagag
cagtggcagcatgtggagctttctgacagcacttcccacaccatcaccgatgcctatgct
gggaaggaatacatcatccaggtggctgccaaggacacagagattggaacatggagtgac
tggagcgttgctgtccacgccacaccctggattgaagagcaaattacttctactaccgaa
gtggacttttctaccgagactaagacctcccccataccgtcctccaacgcaccacaaaag
gctgaacctccagtgggcagagctgccagactcctcacatttttctcccctttgctgtta
ggaatgctgctgcttttcatgtga
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integrated database retrieval system
