KEGG   Cyclopterus lumpus (lumpfish): 117740517
Entry
117740517         CDS       T09199                                 
Symbol
ptpn13
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 13 isoform X1
  KO
K02374  tyrosine-protein phosphatase non-receptor type 13
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    117740517 (ptpn13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clum01009]
    117740517 (ptpn13)
Protein phosphatases and associated proteins [BR:clum01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Non-receptor PTPs
    117740517 (ptpn13)
SSDB
Motif
Pfam: PDZ Y_phosphatase PTN13_u3 PDZ_6 FERM_M PDZ_2 FERM_N FERM_C Tc-R-P KIND PTP-SAK DSPc PTPlike_phytase PTP-NADK SNX17-27-31_F1_FERM RA_2
Other DBs
NCBI-GeneID: 117740517
NCBI-ProteinID: XP_034402859
Ensembl: ENSCLMG00005002131
LinkDB
Position
12:complement(6618464..6657829)
AA seq 2568 aa
MHVSLAEALEVRGGPLQEEEVWAVLSQSAESLQELFHKDPTNMGFIISPWSLLLMPSGNI
SFTDEYVTEQDLRAFTAPEVLGGASLTSISDIEKMHMYSLGMTLFWGADFEIPQSQPMKL
GEHLNSLLLNMCDDVTLSRMSLRTVLDICSKHIRNSSCDPPFSNIRKLVRLVLGSLSQLD
GLLTDRESLPERSKEIRERLRGKGLPSGRSAAPRVLERYRARSQEQTSLNRGLSRSMGSL
PIQELLKREEGAVLQYPPSYHRPNSESPTEFYPKPPSIQHQHSYPYLHPLHPQQKGRPVE
LDRRSLPFHSVDLGPGQARKNWASSVDLACIDPEALRFGALEDARRGSSAISTHSIGRHK
SPLWASRERDSPFSEFGGLKSRKPHHHSALSVGSGLTGAYDRIKERQRKLQVLRQAVDDP
VHNQQRYHSDYSSSSESPSVTSSDLDYRQAKKPSEVRRFSSQLALSSEHDALSLTGHNTH
RHRLYEGAADEGLVGAELLLQRQEEEVQRLQAHLASRLSRANLYPTDDPLAPHRTSMLDL
RDPLFTSSVPLRKPKNFHGPEFVKMASEPCVALSVPSSIMKRGKVEEVQRKVGVVLLNGQ
KLELSCDIKAVCKDVLDMVVAHIGLVEHHLFGLAYLRDDEFFFVEPDAKLSKVAPEGWKE
DPKKKKSDVPFNLFLRIKFFIDDVNLIQHAMTKHQCYLQLRKDILEERMRCDTDNAMLLA
SLALQAEFSDYQPELHGKTYFRLEHYVPVSVLDKVDQTTIKEELPKLHSNYYGASDSEAE
LEFLKVSQRLTEYGVHFHRVLPEKRSQTGIMLGVYSKGVHIFEVLNGNRTPVLRFPWRET
KKISFVKKKICLQNTSDGIKHLFQTDSNKTCQYLLQLCSDQHKFHLQMKARQNNQELQDL
ENSPLGSFQYSLDPRSGDMMGGTVNSGSLAPSLSTRSNPDHLKRISYSEVALHKATSGTI
LVQDELHFPGFNPVASAALSNPRIMSRSHHNLGQMPESPEHRPAESYHGQHSRLSQPPPG
QVASYFQQHQRASSDTDSLLPQQDKSFSTVSQSRSAWSLSKSSSSTEETGQAYVVGVSMH
SSSVPSTPASVNDSLKKKLIALPSPEREITTVNLKKDVKYGLGFQVVGGENSGRMDLGTI
ISSITPGSPADVNGCLKPGDRLISVNDVNLDGLSHTTAIDILQNAPDDVTLVVLQPKDSL
YKESSSGYVPHQAKSALKALNSGQRREPDFENSSEEQAGTGSSPLHSAGAPSSTSSLIHQ
HPSLSFQDSRTSSVAKVSPLPANSVQQCLERSTAAAAAATVVQRHRPEPNMALDPAPPAL
PPKTRKAKVAEAPKVSEHSDWGDSDMDEETYSSSQEKLKVKKEHIMESLNGNAPGVNSLC
PGELFDVELSKKDSSLGISVTVLFGKGGINTTVRHGGVYVKAIIPKGAADLDGRIQKGDR
VVAVNGNSLEGATHQQAVEVLRETGQTVHLLLEKGQPPSDSVHAPLTPLCCRPTAASDQD
QTKNKEQPLEVKEKPEYSFITRDNVFDVRLLKNTSGLGFSFSREESIPEESPSSSMVRVK
KLFPGQPAAESGRINVGDVIMRVNQTPLKGLSQHEVISALRGTGQEVTLLLCRPEYGVLP
EMDTSALTPMPSPRKELVTQAESSLSFGRAKSPPGSQGKRSQVLVDDALERLLLRTPGRH
NSYSDSTDGDEEVEEAFSTSPVEHSRQTWERSVYHTPSSNLGLGRYDSTGQLDDTINSAF
YSPNLSMTRSDHSKRCPPSPVTSDLESSTLHMVSSPTAPSPDPLPPPLPLPLNLTLFSNG
QDIEDFVPEVELKVSLVKSEKGSLGFTLTKGNDHGCYIHDIVQDPAKGDGTLRPGDRMIM
VNNTDVSNMGHTEVVNLVRAAPRVVDLVVGRVLEAPKPPIEAHLLPDIDFKGSQEPLGLV
LDGGCDSVYDVLFVKDIVPGSMAFEEGSLRTLDLIHYINGAPTQDLTLSESTRLMDLSLD
DLTLKATRDGKPVSPGQKSVSFLNNNVSPKVSSSMNGFLKGEDPSDTESLAALCPSEEEI
IHLDLEKLQAGGLGFSVIGGERGIFVKSITPGGIAESSRKLQVGDRLLKVNEELMTGVSH
TKAVTTIRKAKGLVHLIVSRPPDQNPNTYLSYLPINSDKCNGNTDLSEDSGAKTQPFPLR
NELKRVGCPAIPPIDYEDDPLGHKRETEHSAELSEDTDCDGSSLPEDSPESSRKVEVEDD
PRSENYLQMSVGQPEEDEITWGSDELPIENMNSESRDDGPIITEDELTSLPLIKVVPDGQ
YTGPQLNTVVRMMRGLLEQKVPLQEFENLQNLQPLDDCLIGQTKENKKKNRYKNIVPFDT
TRVVLGRDGGYINANFINMSVKDENYMYIACQGPLPTTLGDFWQMVWEQKSNVIAMMTQE
VEGGKVKCQRYWPDTPRTAEMVDDRLQITLIKDQYLDNFVIRLIEVKDVQTNEIQRVTHL
NYTGWPDHGTPSQPEQLLTFISYMRHVHRSGPIVSHCSAGIGRSGTLICIDVVLGLISKD
ADFDLSDVVRNMRLQRQGMIQTEEQYVFCYQVILYVLRCLQAEENISG
NT seq 7707 nt   +upstreamnt  +downstreamnt
atgcatgtgtctctggcagaagccttggaggttcgaggaggtccgctccaggaggaggag
gtctgggcggtgctcagccagagtgctgagagcctccaagaactctttcacaaagaccct
acaaacatgggcttcatcatctctccctggtccctcctgctcatgccctctggcaacatc
tccttcacggacgagtatgtcaccgagcaggatttaagagccttcacagcaccagaggtc
ctgggaggggcctccttgacttccatatctgacatagagaagatgcacatgtactctctg
gggatgaccctgttctggggagcagactttgagatcccccaaagtcagccaatgaagttg
ggggaacacctgaacagcctgctactcaacatgtgtgatgatgtcacattgagtcgaatg
tcgctgcgcacggtgctggacatctgcagcaaacacataagaaactccagttgtgaccct
cccttctctaatatcagaaaactggtccggttggtactgggcagtctttcccagctggac
ggtctgctgactgatagagagtctcttccggaacggagtaaggagattcgggagaggctt
aggggaaagggcttgccctcagggaggagtgccgcccccagggttctggagcgctacaga
gccaggagtcaggagcagacgtcacttaatcgaggcctcagtcgatccatgggctctctg
ccaatccaggaactgttgaagagggaagagggggcagtcctacagtatcccccgtcttac
catcggcccaactctgaatcccccacggaattctaccccaaacccccctcgatccaacac
cagcactcttatccctatctgcacccccttcacccccagcaaaagggccgtcccgtggaa
ctggaccggagatctttacccttccacagtgtggacttgggccctggtcaggcaaggaag
aactgggcttcctctgtggacttggcttgcattgacccagaggctcttcgttttggggcc
ttggaagatgcacggaggggcagcagtgccataagtacgcactccataggcaggcacaaa
tctcccttgtgggcatccagggagagggattctcccttctctgagtttggtgggctgaag
agtaggaagcctcatcaccactcggccctgtcggtgggctcgggtctcaccggcgcctat
gacaggataaaggagagacagaggaaacttcaggtgctaaggcaagcagtggatgaccca
gttcacaaccaacagaggtaccacagtgattacagttcatccagtgaaagcccctcagtg
acctcctctgatctagactacagacaagctaagaaacccagcgaggtcagaaggtttagc
tcccagctggcactttcctctgaacatgatgccctgtcgctgacgggtcacaacacacac
aggcacaggctgtatgagggggcagctgatgaaggcctggttggagcagagctgcttctc
cagaggcaggaggaggaggtgcagcggctccaggcccacctggccagcaggctgtccagg
gccaacctctaccccacagacgaccccctggccccacatcgcacctccatgctcgacctt
cgagaccccctcttcacctcttctgtaccacttcgcaaacccaagaacttccatgggcct
gagtttgtgaagatggccagtgagccctgtgttgccttatctgtcccctcttcaataatg
aagcgtggcaaggtggaggaagtgcagaggaaggtcggtgtggtgctgctgaatggccaa
aagctggagctgagctgtgacatcaaggcagtttgtaaagacgttcttgatatggtggtt
gcccacatagggctggtggagcaccatctcttcggcctcgcatacctcagagatgatgag
tttttctttgttgagccggatgccaaactgtccaaagtggccccagagggatggaaggag
gatcctaagaagaagaaatctgatgtgcctttcaatcttttcttgcgcatcaagttcttc
attgatgacgtcaacctcatacagcacgctatgaccaaacatcagtgctacttacagctg
aggaaggatatcttggaggagaggatgcgctgtgacacagacaacgccatgctgttggct
tcactggcactgcaggctgaatttagtgactaccaacctgagctccatgggaagacctac
ttcagactggagcactacgtcccggtgtccgtcctggataaagtggaccagacgaccatc
aaggaggagctgccgaagcttcacagcaactactatggagcgtctgactctgaggcagag
ttggagtttctcaaggtgagtcagaggctgacagagtatggggtccatttccatcgggtg
cttcctgagaagcggtcccagacgggcatcatgctgggtgtgtactccaagggggtgcac
atcttcgaggtgcttaacggaaatcgtaccccagtgctaaggttcccctggagggagacg
aaaaagatttcctttgtaaaaaagaagatttgcctccagaacacgtcagatgggattaag
cacctgtttcagacggacagcaataagacctgtcagtatctgctccagctctgctctgat
cagcacaagttccacctccagatgaaggcccgccagaacaaccaggagcttcaagaccta
gagaacagccccttgggcagtttccagtattcccttgatcctcgtagtggagacatgatg
ggggggacggtaaactcgggcagcctggcccccagcttatcgacacgctccaacccggac
cacctcaagaggatctcctactcagaagtggccctccacaaggcaacgtctggcacaata
ttggtccaagatgagcttcactttccaggtttcaatccagtggcctcagcggccctttcc
aatccgcggataatgagccgctcccaccacaacctgggccaaatgccagagtctccagag
caccggccggcagagtcatatcatggacagcacagcagactgagtcagccaccacccggc
caagtggcctcttacttccagcaacaccagcgagccagctcagacacagactccctcttg
ccccaacaggacaaatcttttagcacggtgtcccaaagcagatcagcctggagtctcagc
aagtcctcttcctccacagaggagactggccaagcatatgtagtaggtgtcagtatgcac
agttcctctgtgccttcaacgccagcctctgttaacgattcactcaagaaaaagctcatt
gccttaccatctccagagagagagatcacgactgtaaacctgaagaaagatgtgaaatat
ggcctggggttccaggttgttggaggagagaactctggtcggatggaccttggcaccatc
attagctccattactcctggaagtcctgctgacgtcaatggctgcctcaaacctggtgac
cggctgatctcagtgaatgatgtgaacctagatgggctctctcataccaccgcgattgac
atcctccaaaatgctcccgacgatgtaactctggtggtgctgcagcccaaagacagcctc
tacaaagaatcttcttcaggctatgttccccatcaagccaagtctgcattaaaggctcta
aactctggccagagacgagaaccagactttgagaactcgtcagaggagcaggcgggaaca
ggaagctctcctctccacagcgctggtgcaccgtcatccacctcctccctcatccaccag
caccccagcctcagttttcaggactccaggacaagcagcgttgctaaagtcagcccactc
cctgcaaatagtgttcagcagtgcctagaaagatccacagccgctgctgcagctgcaacc
gtcgtccaacgtcacagaccagaacctaacatggctttggatcctgcgccaccggctctg
ccacccaaaactagaaaagctaaagtggcagaagctcccaaagtttccgagcactctgac
tggggcgattcagacatggatgaggagacttattccagtagtcaagagaaactcaaagtc
aaaaaggaacacatcatggaaagtttaaatggtaatgccccaggggtcaatagtctctgt
ccaggagaactatttgacgttgagctgtctaaaaaagacagcagcctgggcataagtgtc
acggtactgttcggcaagggaggaatcaacacgactgttcgccatggaggcgtctacgtc
aaagccatcataccgaaaggagctgccgacctcgacggaaggatacagaaaggtgatcgt
gtggtggctgtcaatggaaacagtctggagggagccactcatcagcaagcggtagaagtt
ctccgagaaacagggcagacagtgcacttgttgctggagaagggtcagccgccttcggac
agtgtccacgctcccctcacgcctctgtgctgtcggccaactgcagccagcgaccaagac
cagaccaagaataaagagcagccacttgaggtcaaggaaaagccagagtacagctttatt
acacgagacaatgtgtttgacgtgcgtctgctgaagaacacatcaggtctgggcttcagt
ttcagtcgggaggagagcatccctgaggaatcccccagttccagcatggtgcgggttaaa
aagctgtttcctggccaaccagctgcagagagcggtcgcatcaacgtgggcgacgtcatc
atgcgggtcaatcagacccccctcaaaggactctcgcaacatgaggtgatatctgccttg
cgaggaacaggacaggaggtgactctgctcctctgtagacctgaatatggggttctacct
gaaatggacacttcagctttgacgcccatgccatctccgcgaaaggagctggtgacccag
gcagagtccagcctgagcttcggcagggcaaagtctcctccaggttcacagggcaagagg
agtcaggtcctcgtggacgacgccctggagaggctgctgctcagaacccccggccgacac
aacagctacagcgacagcactgatggggatgaggaggtggaagaagccttcagcacaagc
cctgtggagcacagcaggcaaacttgggagcggagtgtgtaccacacccccagcagcaac
ctggggctgggacgctacgacagcactggtcaactggacgacaccatcaactcagccttc
tactccccaaacctgtcgatgacaagatcggaccacagcaagaggtgtcctccatccccc
gtgacctctgatctggagtcatccaccctgcatatggtgtcctcccccactgccccaagc
ccggatcccctgcctcctccactgcctctgccgttaaacctcaccctgttcagcaatgga
caggacatagaggactttgtcccggaggtagagctaaaggtctccttggtgaagtcggaa
aagggcagcctgggcttcaccctcacaaaaggtaacgatcatggatgttacatccatgac
atcgtccaggatccagccaaaggagacggaactctcaggcccggggaccggatgattatg
gtgaacaacaccgatgtgagcaatatgggccacaccgaggtggtcaatcttgtgcgtgcg
gcccctcgtgtggttgacttggtggtagggagagtcctggaggctcccaagccccccata
gaagcccatctgctgcctgacatcgacttcaagggcagccaagaaccactgggtttggta
ctggatggtggctgtgacagtgtatatgatgtcttgtttgtgaaagacattgttcccggt
tcaatggcctttgaggagggcagcctgagaacactcgatctaatccactacatcaacggt
gctcccacgcaggacttgactctcagtgagagcaccagactgatggacctgtccctcgac
gacctcacactcaaagccacaagggatggaaagcctgtttctcccgggcagaaaagtgtc
tcttttcttaacaacaatgttagccccaaggtttcatccagcatgaatgggtttcttaaa
ggagaagatccaagcgatacagagagtctagcagcactttgtccttcagaggaggagatc
atacatctggatctggagaagctgcaggcaggaggtctggggttctctgtgattggaggg
gaaagggggatctttgtcaagtccatcaccccgggaggaatagcagagtcctcgaggaaa
ctgcaagtgggagacaggctgctgaaagtgaatgaggaactaatgaccggcgtgtcccac
accaaagccgtcaccaccatccgtaaagctaaaggcctggtacatcttatagtgtccaga
ccgccagaccagaacccaaacacatacctgtcctatctgcccatcaactcggacaagtgc
aatggaaacacagatctgagtgaggacagtggagcaaagactcagccgtttcctctccgt
aatgagctgaagcgcgtcggctgccctgccataccaccaatagactatgaagatgatcca
ctcggacacaaaagagagacggagcacagcgcagagctttcagaggacaccgactgtgat
ggctcttctttacctgaagactcccctgagagttccaggaaagtggaagtggaagacgat
ccgaggagtgaaaactatctgcaaatgagtgttggacagccagaggaagatgaaatcaca
tgggggagtgacgaactgccaattgaaaacatgaactccgaatccagagatgacgggcca
atcatcacagaggatgagctgacctctttgcccctcatcaaagtggtccctgatggccag
tacacaggaccacagctcaacactgtggtccgcatgatgagggggcttctggagcagaaa
gtcccgctgcaggagtttgagaatcttcagaacctccagccgctggacgactgtttgatt
ggtcagacgaaggagaacaagaagaagaaccgctacaagaacattgttccttttgacaca
actcgagttgtgctgggcagagacgggggctacatcaatgccaacttcataaatatgtcc
gtgaaggacgagaactatatgtacatcgcgtgtcagggtcccttacccacaactctgggg
gacttttggcaaatggtctgggagcagaagtctaatgtgatcgccatgatgacccaggaa
gtagagggtgggaaagtgaaatgtcagcgttactggccggacacgccgaggacagcggag
atggtggacgaccggttacagatcacgctgatcaaagaccaatatctcgacaacttcgtc
atccgactcatcgaggtcaaagatgtccagaccaatgaaatacaacgcgtaactcatctg
aactacacgggatggccggaccacgggacgccctcgcaacccgagcagctgctcaccttt
atttcctacatgaggcacgtccatcgatcggggccaatagtctcacactgcagcgcgggc
atcggtcgatcaggaaccctcatctgtatcgacgtggttctgggtctcatcagtaaagat
gcggattttgatctttcggatgtggtgaggaacatgagacttcagagacagggaatgatc
cagacagaggagcaatatgtcttctgctatcaagtgatcctgtatgtcctcagatgcctt
caagcagaggaaaacatctctggatag

DBGET integrated database retrieval system