Cyclopterus lumpus (lumpfish): 117740526
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Entry
117740526 CDS
T09199
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117740526
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117740526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
117740526
NCBI-ProteinID:
XP_034402877
Ensembl:
ENSCLMG00005012872
LinkDB
All DBs
Position
12:9050064..9120772
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AA seq
2112 aa
AA seq
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MGMRRGQWKDEVQVTICWAIESVKAELTGIKWRCYSFRGSGEYGPVISAPAQDDPVLRSF
MRCVQANLLCVWRRKIKPDAKELWIFWWGEEPNLADVIHRELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKGFVRIGKWFFKPHELQERLLGNSEHLSCSFSFFLHGESNVCTS
VEIAQHQPAHHITEHHICLAQTSITPVQVILSPYGLSATLTGQAYKMSDPAARKLMEEWS
YFYPVVLPQKEGSGEKEKEEEASQAYDRHCHAAVEVIVGGVRMTYPAALVLIAQVDLPLE
QPPPVPAAQGLSREPNHCSVPLTPPTSPQQPCSADSGFVTSISSVPTPDNSMGVASISPK
HSGKKLTCQVVHQAWRECYLNQPQHELNPPTDMSLKKEVPNGVTTWDFSDLGARASCSCS
RLKQQKLNLTTTSTANPQTSANPTQSSGPSLYPPSLPKHKTSDKTEKADKQSKRPAMIPF
HHRLSVNQETPLEQDSPGGPQLGGLGGLEPSMEPLATLPSCKYPKPLSNGRKAPESLLHS
PMSPLPPTLSPHPRMQDQEILDGPMDMPVCQDGALGLGLMPSETAMYTAVLRQRENGAGW
WRGFRTPRTDQTDYRPCELPTDKLEEVRTEIATEGALLKRLYTQTHKRFKISEERVRDHI
HTLGLFQQPGVEALREPGDDPYDFKEGDIEYTFSSSKRLKGQGREPSKKCKGEEITSNGA
LPDGKDAMSIFNSGPKSDESSQDDGAAKANPSLTREKDLVVNISDLDNIFDEDEEELGHS
TKLPVSTEDRPLGKEGRVAVPYPSTVADLQRMFPTPPSLEQHPAFSPITTYRDTPSQEPP
APSGVADHLLPLASSQFTEYRMEIEEGMDSPRQEDIKPQIGSSMFAPLSCLPSRALPQLK
ITEQCYYRPSWTLLPKMEHFPVMHSQNTTFIRDGYTNMPSVTNLSDQEYGQMSGTTASVS
TSVGILQSPATPRFSVPTPRTPRTPRGINAASSGQGSVKQDGTELSSPVSTPCTSLPLSS
VDPLARPGPSLPEAHSLYAILLLSDSVLNVFKDRNFDSCCICACNMNVKGADVGVYIPDS
TCEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIYGRTSEVGRAAERRLALCRRDPTMGD
PRAKRAQDTAPASPLVMILLQEHCSQPISSLASLHFPLSCSCHGRKGALLQSWMSEKQWA
DGSDACVDCYNAFEQGLQYVDNPTGGKVDPAVVRSTALHSWPHTNVVDMNMLSSQDMVRM
LLSLQPFLQDAIQKKRSGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPIPKVL
LGYDRDRDFLALSPLALPFWEKLLLEPYGGQRDVAYVVLCPNSPSLLGAARAFFQDLSAV
YETCRLGKHRPLAKVSRDGLVRVGEEVEPEKLEELDVDQWVSGPWAGQQHADNLSKLKLY
AYACKQQLGPQLSALPLDSSLLLPPKVQPPLNPTSSTQPASSGRPQAWGPDGEQAPGAVS
SGNASTPTAATSNQTGETTQGAPCDAKGPSSATPPASTPAENPELTAEQSRIGIPTVAES
MDSLANPPAIVIYIVDAFLSSSGARNEGGEEEEGDEVEASSIWLLGLLRCYTEMLQTLPE
TMRPALVLQVVPCQYLLQPASGESHFYLQHLRSLSFSCYSQCRRLMPRHTHIKSLTGFGP
VSTVNSVLKSPEHPSPMQLYTPPFILGPTRSKQPEPGEVWAELPPKYNVLFVGYCLSHDQ
RWILVSCTDQQGELLETSIINIDVPNRARRPKVSARKMGLQKLWEWCIGIIQMTSLPWRV
VIGRLGRLGHGELKDWSSLLGEHSLHSIGRQLKEACRMCGISAADSPSILSACLVAMEPQ
GSFVIMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAPSSYPTED
NNDDMFDLPFPDELENDIGHDMMLITGNLHPSPNTSPVASPGSPSGMGMGSHFQHTKNQG
ERLLSRDSPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAESQCPLFLKASLHHHIS
IAQTDELVCDKTKRPPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDRQSCLPVHLAV
LIQMYNAILNML
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atggggatgagaaggggccagtggaaggatgaagtgcaggtcaccatttgctgggccata
gaatcggtcaaggcggagctgacgggcattaaatggcgttgctacagcttccgtggcagc
ggggagtacgggccggtgatctccgccccggcccaggacgacccggttctgcgcagcttc
atgcgctgcgtgcaggccaacctgctgtgcgtatggcgccgcaaaatcaagcccgacgcc
aaggagctgtggatcttctggtggggcgaagagcccaacctcgccgatgtcattcaccgc
gagctggaagtggctgaggagggtctttgggagtgcgggctgtcctacgagtgcaggacc
ctcttattcaaggccatacacaacctgctggaaagatgtttgatggataaaggctttgtg
aggatcgggaagtggttcttcaagccacacgaactgcaagaaaggttgttgggcaacagt
gaacacctttcgtgctccttctccttcttcctccacggggagagcaacgtgtgcacgagt
gtggagatcgcccagcaccagcctgcacaccacatcacagagcaccacatctgcctcgca
cagacctccatcacaccagtgcaagttatcctgagtccgtacggtctgagcgccactctc
acgggtcaggcctacaagatgagtgacccggcggcacggaagctgatggaggagtggagc
tacttctaccccgtggtacttccgcagaaagagggaagtggagaaaaggaaaaagaagaa
gaagcgagccaggcctatgatcgccactgtcacgcggcagtggaggtcatcgtgggtgga
gtaaggatgacctacccagctgctttagtgctgattgcccaggtggacctaccattggag
cagcctccaccggttcctgcagctcaaggcctcagcagggagccaaaccactgcagtgtg
ccgctcacaccgccaacgtcaccgcagcagccctgttcagcggacagcggctttgtgacc
tccatctccagtgtccccacaccagacaacagcatgggggtcgccagcatcagcccaaag
cattctgggaagaagctaacctgtcaggtagtccatcaggcctggagggagtgctatctc
aaccagcctcagcatgaattgaatccgccaactgacatgtcgcttaagaaagaagtgcct
aatggagtaaccacgtgggacttcagcgatctgggagcaagagcgtcctgcagctgctcc
aggttgaagcagcagaagttgaatctgaccaccacatccactgccaacccccagaccagt
gccaaccccactcagtcctctggcccgtcattataccctccctccctgcccaaacacaag
accagtgacaagacagaaaaggctgacaaacagtccaagaggccagccatgatccccttc
caccaccgtctatctgtcaatcaggagacccctctggaacaagactcaccgggagggcct
cagcttgggggtcttgggggtctggagccatccatggagcctctggcaactctgccaagc
tgcaagtatcccaaacccctctccaatggcagaaaagcccctgagtctcttctccattcg
ccaatgtctccacttccgcccacactcagcccacacccccgaatgcaggatcaagagatc
ctggatgggcctatggatatgcctgtctgtcaggacggggctttagggctggggttgatg
cccagcgagactgcaatgtatacagctgtgctgaggcagagggagaatggggccggctgg
tggagaggcttcaggactccaaggactgatcagactgactacagaccctgtgaactcccc
actgataaattagaagaagtgaggacagagattgccactgaaggagctctgctaaaaaga
ctatatacacagactcacaagagatttaagatctcagaggagcgggtgagggaccacatc
cacactttgggcctgttccagcagccaggtgtggaggcactgcgggagcctggggatgat
ccctacgactttaaggaaggagacatcgagtacacgttctcctcttccaagaggttaaag
ggtcaaggacgagaacccagcaagaagtgcaagggagaagaaatcaccagcaatggggca
ctgcctgatgggaaagatgctatgtccatttttaactctggtccaaaatcagatgaatcc
agtcaagatgatggagctgccaaagccaacccttctctgaccagagaaaaagatcttgtg
gtcaacatctctgatctagacaacatatttgatgaagatgaggaagagctggggcactca
accaagctcccagtatcaacagaagatcgtcctctggggaaagaagggagagttgctgta
ccttatccatcaacagtagcagacctccagaggatgtttcccacgcctccttccttagag
caacacccagccttctctcccatcacaacctatcgtgacactccaagccaagagccccct
gcacccagcggagtggctgaccacctgctgcctttagcctcctcccagttcacggagtac
aggatggagattgaggagggcatggacagtcccaggcaggaggatatcaagccacaaatc
ggctcctccatgtttgctccactctcctgcttacccagccgggctctaccacaactcaag
attaccgagcaatgttactatcgtccttcctggaccctcttgcccaaaatggagcatttc
ccggtcatgcattcccagaataccactttcatcagagatggatacacaaacatgccaagt
gtcaccaacctctcagaccaggagtacggccagatgagtggcaccactgcctctgtgagc
acctccgttggcatcctccaatctcctgccactccccgtttctctgtgcccactccacga
acccctcgtacccccaggggtattaacgctgcgagctctgggcagggttccgtgaagcag
gatggtactgagctcagctcaccggtttccacgccctgcaccagcctgcctcttagctct
gtagatcccctagctcggccagggccctcccttcctgaggcccacagcctgtacgctatc
ctgctgctctcagactccgtcctcaacgtcttcaaggatcgcaattttgacagctgctgt
atctgtgcctgcaatatgaatgtcaaaggagcagatgtgggggtgtatatccctgattcc
acttgtgaagatcagtaccgctgtatgtgtggcttcagtgccattgtgaacaggcggctg
gcccatggcacgggcctctttctggaggacgagctggatatttatggccggacttctgag
gtaggccgggcggccgagaggaggctggctctttgccggcgggacccaactatgggtgac
cccagggccaagcgtgcgcaggacacagcccccgcctctccgttagtcatgatccttctg
caggagcactgttcccagcctatttcctccctggcgtccctgcattttcccctcagctgt
tcctgccatggccgcaagggagcactgctccaaagctggatgtcggaaaagcagtgggca
gatggtagtgatgcctgtgtggactgctacaatgcctttgagcaggggttgcagtatgtg
gataaccccacaggagggaaagtagatccagctgttgtcagaagtacagctcttcactcc
tggcctcatacaaatgtggtggacatgaacatgttgtcgtcccaggacatggttcgtatg
ctgctttctctgcagcctttcttgcaggatgcaatccagaagaagagatcaggacgaacc
tgggaaaacatccagcatgttcagggtcctctcacctggcagcagttccataagatggcc
ggcagaggctcctacggttcggaggagtcaccagagcccttgcccatcccaaaagtgtta
ctgggctatgacagggacagggacttcttggcattgtctcctttggcgttacctttctgg
gagaagttgctgctggagccgtatggggggcaacgggatgtggcttatgtggtgctgtgt
cccaatagcccctctctgctgggtgcagcccgcgccttcttccaggacctcagcgctgtt
tatgagacgtgccgtctagggaagcaccgtcctctggccaaggtgtccagggacggcctg
gtgcgcgtgggagaagaagtggaaccagaaaagctggaggagctggatgtggaccagtgg
gtgtctggaccctgggctggacagcagcacgccgacaacctcagcaaacttaaactctac
gcttatgcctgcaagcagcagcttggtccccagctgtcagcccttccgttggacagcagt
cttctgttgcctcccaaagttcagcctcctttaaaccccacatcctcaacacagcctgcc
tcttcggggcggcctcaagcttggggccctgatggtgaacaagctccaggggccgtcagt
tcaggaaatgcttcgaccccgactgcagcaacctcaaaccagacaggggagacgacccaa
ggtgcaccctgcgacgccaaagggccctccagtgccacacccccagccagcacaccagca
gaaaaccctgaactcactgctgagcagtctaggatcggcatccccactgtggccgaatca
atggacagcctcgccaacccaccagctattgttatttacatagtggacgcttttcttagc
tcaagcggagcgagaaatgaagggggcgaggaagaagagggtgacgaagtggaggccagt
agcatttggctactagggctacttcgctgctacacagagatgctacagactctgcctgag
accatgagacctgcactggtactacaggtggtgccgtgccagtacctcctccagccggcc
agtggggagagccatttctacctgcaacatctgcgctccctgtccttctcctgctactcc
caatgcagacgtctgatgccccgacatacacacatcaagtccctgactggctttggtcct
gtgtcaactgttaactctgtccttaagagtccagagcatcccagcccaatgcagctgtac
actccgcctttcatccttggtccgacccgttccaagcagccagaaccaggggaggtatgg
gcagagctccctcccaaatacaatgtgctctttgttggatactgcctatcacatgaccag
cgctggatccttgtgtcctgcactgaccagcagggggagctcctggagaccagtattatc
aacattgatgtacccaacagagcgcgacgtcccaaggtttcagccagaaagatgggactg
cagaagctttgggaatggtgcattggcatcatccagatgacctcactgccatggagggtt
gtgatcggtcgattaggcaggctggggcatggagagctgaaggactggagctcactcctc
ggggagcattccctccattcaatagggcgtcagctgaaggaggcttgtcgaatgtgtggc
atctcagctgctgactcccccagtatcctcagtgcctgcctggtcgccatggagccacag
ggttcctttgtgatcatgcccgatgcagtcaccatgggctcagtgttcggacgcagcact
gctctaaacttgcagacctcgcagctgaacacacctcaggatgcttcctgtacgcacatc
ctcgtcttcccaacttctgccaccacccagctggcccccagctcctaccctactgaggac
aataatgacgacatgttcgatttgccctttcctgacgaactggagaacgacattggccat
gacatgatgctcatcacagggaacctccacccgtcccccaacacctctcctgtggcctca
cctggctctccgtccgggatgggaatgggttcacatttccagcacaccaagaaccaggga
gagcgcttgctgtccagggacagtccaccagaagagctgaagcagcagccacttgctctg
ggctactacgtctccactgcacaagcaaatggacttcctcattggttctgggcctcctgt
ccgcaggctgagagccagtgtccactcttcctcaaggcctccctccaccaccacatctcc
atagctcaaacagatgagttggtgtgcgacaagacgaagaggccccctcaccccttggac
tcaaagaccacctcggatgtgctcaggttcgttttggagcagtacaacgccctctcctgg
ctgacgtgtacccctgccacccaggaccggcagtcctgcctgcctgtccacctggctgta
ctgatccaaatgtacaacgccatcctgaacatgctttaa
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