Cyclopterus lumpus (lumpfish): 117740543
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Entry
117740543 CDS
T09199
Name
(RefSeq) nodal homolog 2-A-like
KO
K04666
nodal
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
clum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117740543
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117740543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117740543
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Transforming growth factors (RSTK binding)
117740543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
117740543
NCBI-ProteinID:
XP_034402903
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Position
12:complement(13019564..13021145)
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AA seq
407 aa
AA seq
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MKGLAVDYSFVLLLLVDLLLGVAAQPFPRMRPDALLRGMSAGPRRTVRRQQASQLPLYMM
QLYRTMLTEDRDSTPAASVNHIRTEDNPVLHDSDSVVSLVAKSCQQIGKRWSVTFDMSSM
SASDNIQLAELRIRLPPFTESPGASVDIYQSHRGRCSGTHCPENRQFLGRVVAHPSSMVS
PSSWKVFNMTEMLSRWLQRDHPAQRTEEDEAEVKEQEGVGHPTAHRVMMVVFSRQFSNSR
RMPTLIRTAEHSKYVSLDHERAAAGSGPRPRSRRSQRSPRTQQQQQRVAGAAAASRPAEE
EQKGPLCRKVDMWVDFATLGWSDWIVYPKHYNAYRCEGSCPTPVDETFTPTNHAYMQSLL
KLHHPDKVPCLSCVPTHLAPLSMLYFENGKMVMRHHENMVVEECGCH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaagggactcgcagtggattactctttcgtgcttcttcttctggtggatttgcttctg
ggtgtcgccgcgcagccctttcccaggatgcgccctgacgcactgctccgtgggatgagc
gccggccccagacgcacagtgcgcaggcagcaggccagccagctgcccctctacatgatg
cagctctaccggaccatgctgaccgaggaccgggacagcactccggctgctagcgtcaac
cacatcaggaccgaggacaaccccgttctgcacgactccgactctgtggtcagccttgtc
gctaagagctgccagcagattggcaagaggtggtccgtcacctttgacatgtcctccatg
tccgcaagtgacaacatccaactggcggaactccgcatccgcctgccccccttcaccgag
tctcccggagcctcggtggacatctaccaatctcacaggggccgctgctcgggcacgcac
tgccccgagaaccgtcagttcctgggccgcgtggtggcccatcccagctcgatggtctcc
ccctcctcctggaaggtgttcaacatgacggaaatgctctctcgctggctgcagcgggat
caccccgcgcagaggacggaggaggatgaggctgaggtgaaggagcaggagggagtcgga
caccctacagctcaccgagtcatgatggtggtcttctcaaggcaattctccaacagccgg
cgaatgccgacactcatccgcacagcagagcactccaagtacgtcagcctggaccacgag
agagcggcggccggctctggtccccggccgaggagccgcaggtcccagaggtcgccccgc
acccagcagcagcagcagagagtggctggagccgctgctgccagcaggcccgcagaggag
gagcagaagggtcccctctgcaggaaggtggacatgtgggtcgacttcgcaacgctcggc
tggagcgattggattgtctatcccaaacactacaacgcctatcgctgtgaagggagctgt
ccgacaccagtagatgagaccttcaccccaaccaaccatgcatacatgcagagccttctg
aaacttcaccacccagacaaggtgccatgcctttcctgtgtgccaacgcacctggcgccg
ctttccatgttgtacttcgagaacgggaagatggtcatgaggcatcacgagaacatggtg
gtggaggagtgcggctgccactga
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