Cyclopterus lumpus (lumpfish): 117740560
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Entry
117740560 CDS
T09199
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117740560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117740560
Transporters [BR:
clum02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
117740560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
LD_SV2
MFS_2
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
117740560
NCBI-ProteinID:
XP_034402922
Ensembl:
ENSCLMG00005019494
LinkDB
All DBs
Position
12:4398009..4419782
Genome browser
AA seq
741 aa
AA seq
DB search
MEETHNNRTALAKGAKDIAKEAKKHAAKNVSKAVDRASDEYSTHRSYNRFQDEDEEENAG
NAYGQQDGHRGGNAAADVDVDDDDGASSDATEGHDDEDEIYEGEYQGVPARGDGKPRDGQ
VALGQPVSDSLKSRKELENERQSDEEELAQQYELIMQECGHGRFQWQLFFVLGLALMSDG
VEVFVVGFVLPSAETDMCVPNSGAGWLGSIVYLGMMFGAFFWGGLSDRMGRKQCLLISMS
VNGFFAFLSSFVQGYSMFLVCRMVSGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFW
MIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVALTFMPESPRF
FLETGKHDEAWMVLKHIHDTNMRARGEPERVFTVNRIKVPKQLDELVEMQNESANPVLKA
LLKIKTELRGIWLTFMRCFNYPVKDNTIKLAVVWFTLSFGYYGLSVWFPDVIKHLQADDY
ASRVKIHNSERIEDFTFNFTLENQIHRNGVFLNDRFIGMKIKSVTFIDSSFLNCFFEDVS
SVGSFFKNCTFIDSFFYNTDIDDTKLTNSRVINSSFHHNKTGCQMTFDDDYSAYWVYFVN
FLGTLAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGL
SISAWNSLDVVTTELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKAIPILMASS
VLVGGGLVGLRLPDTRANVLM
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacgcataacaaccggactgccttggctaaaggcgccaaggacatcgctaaa
gaagccaagaagcacgccgccaaaaatgtaagcaaagccgtcgaccgcgcctcggacgag
tactcgacccaccgcagctacaaccggttccaggacgaggacgaggaagagaacgccggc
aacgcgtacggtcagcaagacggtcaccgcggcggcaacgcggccgccgacgtcgacgtc
gacgacgacgacggggcctcgagcgacgccacggagggccacgacgacgaagacgagatc
tacgagggggagtaccaaggcgtgccggcacgcggcgacgggaagccgcgggacggccag
gtggcgctgggccagccggtgtccgacagcctgaagagccgcaaggagctggagaacgag
aggcagtcggacgaggaggagctcgcccagcagtacgagctcatcatgcaggagtgcggc
cacgggaggttccagtggcagctgttcttcgtcctggggctggcgctcatgtcggacggc
gtggaggtgttcgtggtgggcttcgtcctgcccagcgccgagacggacatgtgcgtcccc
aactcgggcgccgggtggctcggtagcatcgtgtacctgggcatgatgtttggcgccttc
ttttggggcggcctgtcggaccggatgggccgtaaacagtgcctgctcatatccatgtcc
gtcaacggcttcttcgccttcctgtcctccttcgtccagggctacagcatgttcctcgtg
tgccgtatggtgtccggcttcgggatcggcggagccgtgccgatcgtgttctcctacttc
gcggaggtgttggctcgggagaagagaggcgagcatctgagctggctctgcatgttctgg
atgatcggagggatttacgcctccgccatggcctgggccatcatcccacactacggctgg
agtttcagcatgggttcggcctaccagttccacagctggagggtgtttgtggtggtgtgt
gcgctgccgtgtgtctctgcagtggtggctctcacttttatgcccgagagccctcgcttc
ttcctggagacgggtaaacacgacgaggcctggatggtgctcaaacacatccacgacacc
aacatgcgagcccgcggagagccggagagagtcttcaccgtgaaccggatcaaagtcccc
aagcagctggacgagctggtggagatgcagaacgagtcggccaacccggtgctcaaggcc
ctcctcaagatcaagaccgagctcagaggcatctggttgacttttatgaggtgcttcaac
tacccggtgaaagacaacaccattaagctggctgtggtctggttcactctgtcctttggg
tactacgggctctctgtgtggttccccgatgtcatcaagcacctccaggccgacgactac
gcctccagggtgaagatccacaacagcgaacgcattgaagacttcaccttcaacttcacc
ctggagaaccagatccacagaaacggggtcttcctgaatgacaggttcatcggtatgaag
atcaaatccgtcacgttcatcgactcctctttcctcaactgctttttcgaagacgtctcc
tccgtgggatccttcttcaaaaactgcaccttcatagactccttcttctacaacacggat
atcgacgacaccaaactaacgaactccagagtgatcaacagctcattccaccacaacaag
acgggctgccagatgacgttcgacgacgactacagcgcctactgggtctacttcgtcaac
ttcctgggaacgctggccgtgttgcccgggaacatcgtctcggccctcctcatggacaaa
ataggccgcctgagcatgttaggagggtccatggtgctgtcgggcatcagctgcttcttc
ctttggttcggcaccagcgagtccatgatgatcttcatgctgtgtctctacaacggcctc
agcatctccgcctggaactccctggatgtggtcaccacggagctgtacccgaccgacagg
aggggcacaggctttggcttctgcaacgccatgtgcaagctggcagcggtgctgggcaac
ctgatctttggctcgctggtcggcatcaccaaggccatccccatcctgatggcgtcgtct
gtgttggttggcggcgggctggtggggctccggctgccagacactcgcgccaacgtcctc
atgtaa
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