Cyclopterus lumpus (lumpfish): 117740561
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Entry
117740561 CDS
T09199
Symbol
lhx3
Name
(RefSeq) LIM/homeobox protein Lhx3 isoform X1
KO
K09374
LIM homeobox protein 3/4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117740561 (lhx3)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
117740561 (lhx3)
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
117740561
NCBI-ProteinID:
XP_034402924
Ensembl:
ENSCLMG00005010909
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All DBs
Position
12:complement(7816359..7825425)
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AA seq
409 aa
AA seq
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MDGRGERNSPKEAPNNTEMLLALLSHSEELRKDIPLCAGCNQHIVDRFILKVLDRHWHSK
CLKCSDCQAQLSEKCFSRGDSVYCKEDFFKRFGTKCAACQQGIPPTQVVRRAQDFVYHLH
CFACIVCKRQLATGDEYYLMEDSRLVCKADYETAKQREADSTAKRPRTTITAKQLETLKN
AYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRS
RGSSKSDKDSIQEEGMDSDAEVSFTDEPPMSELGLTNGIYSSLSESSPAMGGRQGGNNHS
SFPLEHGALPTQDQFHDIRSNSPYGLPQSPGSLQALPRHQPLISSLVYPDSDLSIMTQGS
GPGINLAVRGSMSAANGPSSDLSTGSSGGYPDFPASPASWLDEVDHGQF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgcggtgagcgcaactctccaaaagaggcaccgaataacacggagatgctc
ctcgctctgctgtcgcacagtgaggagctacggaaagacatcccgttatgtgccggctgc
aaccagcacatcgtggaccgcttcatcctcaaagtgctggaccgccactggcacagcaag
tgcctgaaatgcagcgactgtcaggcgcaactgtccgagaagtgcttcagcaggggcgac
agcgtctactgcaaagaggatttcttcaagagattcgggaccaaatgcgccgcctgtcag
cagggcatcccgcccacacaggtggtgaggagggcgcaggacttcgtctaccacctgcac
tgtttcgcctgcatcgtgtgcaaaaggcaactggccaccggggacgagtactatctgatg
gaggacagcaggctggtgtgcaaggccgactacgagacggccaaacagagagaagcagat
tctactgcaaaaaggccacgaacgaccatcactgctaaacagctggaaacacttaagaac
gcgtacaataactctcccaaacccgcccgccatgtccgggagcagctttcatcagagacg
ggcctggatatgcgagttgtgcaggtttggtttcagaacaggcgagctaaagagaaaagg
ctgaagaaagatgccggtcggcagaggtgggggcagtatttccgcaacatgaagaggtca
cgaggaagctccaaatccgacaaggacagcattcaggaggagggcatggacagtgatgcc
gaggtgtcttttacagatgaaccacccatgtcagagcttggcctcactaatggcatctac
agcagcctgagtgagtcctctccagccatggggggccgccaagggggcaacaaccacagc
tccttcccactggagcatggcgctcttcccactcaagaccagttccacgacatccgctcc
aacagcccctacggccttcctcagtcgccagggtcgcttcaggcgctacccaggcaccag
cctctcatctccagcttggtctaccccgactccgacctttcgatcatgacccagggcagc
gggcctgggatcaaccttgctgtgaggggctccatgagtgccgccaacggccccagctcg
gacctctcgaccggcagcagcggtggatacccagactttcctgccagtcctgcatcctgg
ttagacgaagtggaccacgggcagttttga
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