Cyclopterus lumpus (lumpfish): 117740592
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Entry
117740592 CDS
T09199
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117740592 (srek1)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
117740592 (srek1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
TFIIA
Motif
Other DBs
NCBI-GeneID:
117740592
NCBI-ProteinID:
XP_034402972
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All DBs
Position
12:5927959..5935699
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AA seq
468 aa
AA seq
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MNGMPGTAVVQVTNLSSSVSSEQMRTLFGFLGDIEELRLYPPDNGPVSFSSKVCYIKYRD
PSSVGVAQHLTNTVFVDRALIVVPCAEGRIPEEAKALSLLAPAAPVPSLIPGGGLLPIPT
PAPLQNLNLPVVNRVPAALEPASSSSSSSASAQQPLMGNVDPSKVDEIRRTVYVGNLNSQ
TTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFVEQESVGRALTFNGVMFGDRPLK
VNHSNNAIVKPPEMTPQAAAKELETVMKRVREAQCTIAAAIDPADLKKSSPSRSRKSHRS
RSQSRSRSRTQRKRSQSKQRPAPKVGPKTATHNSRSTHKRRSRSRDKRQSRSRSRGHKRR
SKERSRSPRRKARSPSPKRGRKDKRRERSRDRKNRSTSRKRSRKDEDRIKGKAKPKKVER
DYDREEKEDDESEDALSEDMASSARTHHNGSCKTRNAERAPMGAGGSK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggatgccagggaccgctgtcgtccaggtcaccaatctgtcctcgtccgtgagc
agcgagcagatgcgcactctgttcggtttcctcggagacatcgaggagctgcggctctac
ccgcccgacaatggccccgtgtctttctcctccaaagtgtgctatataaagtatcgagac
ccctccagtgttggtgtggcgcaacatctcacaaatactgtttttgttgacagagctctg
atcgtggtgccatgtgcggaagggagaatcccagaagaggccaaggccttatcacttttg
gcacctgcagccccagtacccagtctgattcctggaggcggactgctaccaattcccact
ccggctccgcttcagaacctgaaccttcccgtcgtgaatcgggtgccagctgccctggaa
cccgcatcatcatcatcgtcgtcatcagcgagcgcccagcaacccctcatgggaaatgtg
gatccctcaaaagtggatgagatcaggaggaccgtctatgttggcaacttgaactcacag
accaccactgcagaccagctgctggagttcttcaagcaggtgggagaggtcaagtttgtg
cgaatggccggcgatgagactcagccgacacgcttcgccttcgtggagtttgtggagcag
gagtccgtcggcagagccctgacattcaatggagtcatgttcggggaccgacccctgaag
gttaatcattccaataacgccatagtaaaacctcccgagatgacgccacaggccgccgct
aaggagctagagactgtgatgaagagggtgagggaggcccagtgtaccattgcggccgcc
atcgatccagctgacctaaagaagtcctcccccagtcggtcgcggaagtcgcaccggtcc
cgctcgcagtcgcgctcccgctcaagaacgcagaggaaaaggtcccaatcgaaacaaaga
ccggcgccgaaggtgggtccgaagactgccacccacaattcccgcagcacccacaagcgg
cgctctcgctcccgagacaagaggcaaagtcggagtcgctccaggggccacaagaggagg
agtaaggaacggtccaggagccctcggaggaaagccagatcgccctcaccaaaaagaggc
aggaaagacaagaggagggagcgcagcagggacagaaagaaccgctccacatccaggaag
aggagccgcaaggacgaggacaggataaagggcaaggccaagccaaagaaggtggaaagg
gactatgaccgcgaggaaaaggaagacgatgaaagcgaagacgcactcagcgaggacatg
gcgtcatcggcgcgcacccatcataacggcagctgcaagactcgcaacgctgagcgtgca
cccatgggcgcaggcggctccaagtga
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