KEGG   Cyclopterus lumpus (lumpfish): 117740612
Entry
117740612         CDS       T09199                                 
Symbol
wdr45
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4 isoform X1
  KO
K22991  WD repeat-containing protein 45
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117740612 (wdr45)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117740612 (wdr45)
Membrane trafficking [BR:clum04131]
 Autophagy
  Other autophagy associated proteins
   Others
    117740612 (wdr45)
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_EML_2 BCAS3_WD40 WDR55 Beta-prop_WDR36-Utp21_1st CNH WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_VPS8
Other DBs
NCBI-GeneID: 117740612
NCBI-ProteinID: XP_034403002
Ensembl: ENSCLMG00005001793
UniProt: A0A8C2WE22
LinkDB
Position
12:3440201..3447573
AA seq 358 aa
MTQQRGVNSLQFNQNQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVASCSMLHRSNL
LAVVGGGVNPKFSEISVLVWDDARESRDPKDKLVLEFTFTKPVLAVRMRHDKIIIVLKNR
IYVYSFPDNPVKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLSNTKPGTS
SAPFTVNAHQSEIACVALNQPGSVAASASRKGTLIRLFDTTTRDKLVELRRGTDAATLYC
INFSHDSSFLCASSDKGTVHIFALKDTKLNRRSALARVGKVGPVIGQYVDSQWSLASFTV
PAECACICAFGKNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgactcagcagagaggagtcaacagtctgcagttcaaccagaaccagagctgtttctgc
tgcgccatggagacgggggtccggatctacaacgtggagccgctgatggagaaaggtcac
ctggaccacgagcaggtcggcagtgtggcctcgtgctccatgttgcatcgatccaacctg
ctggctgtcgttggaggcggagtcaaccccaaattctctgaaatatctgttctggtctgg
gacgacgctcgagagtccagagaccccaaagacaaactggtcctggagttcaccttcacc
aaaccagttctggctgttcgcatgagacacgacaagatcatcatcgttttgaagaacagg
atctacgtgtacagttttccagacaacccggtcaaactgtttgagttcgacaccagagac
aaccccaaaggtttgtgtgacttgtgtccgagtctggagaaacagctgctggtgtttccg
ggtcacaaatgcggcagcttgcagctggtggacttgtccaacaccaaacccggcacctcg
tcggcgccgttcaccgtcaacgcccaccagagcgagatcgcctgcgtggcgctgaaccag
ccgggcagcgtggcggcgtcggcctcccgcaagggaacgctcatccgtctgttcgacacc
acgacgcgagacaagctggtggagctgcggcgggggacggacgccgccacgctctactgc
atcaacttcagccacgactcgtcgttcctctgcgcctccagtgacaaaggcaccgtccac
atcttcgccctcaaggacaccaaactcaaccgccgctccgcgctggcacgcgtcgggaag
gtgggccctgtgattggtcagtacgtggacagccagtggtcgttggcgagcttcaccgtg
ccggctgagtgcgcctgcatctgtgcttttgggaagaacacgtccaagaacgtgaactcc
gtcatcgccatctgtgtggacgggaccttccacaagtacgtgttcacccccgatggaaac
tgcaaccgagaagccttcgatgtgtatctggacatttgtgacgatgacgacttctga

DBGET integrated database retrieval system