Cyclopterus lumpus (lumpfish): 117740643
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Entry
117740643 CDS
T09199
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03272
Virion - Hepatitis viruses
clum04145
Phagosome
clum04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117740643 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117740643 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
117740643 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117740643 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117740643 (scarb1)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Phagocytosis
Scavenger receptors
117740643 (scarb1)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117740643 (scarb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
117740643
NCBI-ProteinID:
XP_034403055
Ensembl:
ENSCLMG00005019489
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All DBs
Position
12:2972667..2999126
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AA seq
489 aa
AA seq
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MAINKASVAVVFMVSGVLMVFFGTVLTFVGPIIIDDQVVKNTVIDPKNEVSYRMWKDVPV
PFYMSVYFFNVLNPQEILKGEKPMVEQRGPFVYRKQIQKENITFHSNGTVSYLEFRRFFF
EPDMSSGNESEVVTIPNMLVLGAAIMMENLPFAVRLMISATFKTFKEGPFLTKTVGELMW
GYDSGLVDFLNKYLPGMLPSTGKFGLFADFNNSNTGLFTIHTGQDDIRKVHMVDSWNGLT
KLSNWNSPQCNMINGTAGQMWPPFMSRESTLPFYSPDACRSLELVYQRDGVMEGIPLYRY
VAPKTMFANGSDYAPNEGFCPCRQSGLLNVSSCRHNSPVFISHPHFFNADPVLLDFVHGL
KPTEDEHGLFIDIHPLTGVPLNVSIRLQLNLYMKRVSAITETGKISEVVMPMIWFEESGY
IDGPILSTFYTNLVVLPAVMEYMQYGFIVLGVVIILIAALVHHRVKVSDEERVNKGEIKG
EIKGEIYRK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaataaagcgtcggtcgcggtggtgttcatggtgtccggggtcctcatggtg
ttcttcgggacggttcttacgttcgtgggaccgataatcatcgacgaccaggtggtgaag
aacacggtgatcgacccgaagaacgaggtgtcctacaggatgtggaaggacgtcccggtg
ccgttctacatgtccgtctacttcttcaacgtcctcaacccgcaggagatcctgaagggg
gagaagcccatggtggagcagaggggccccttcgtgtacagaaaacaaatccagaaggaa
aacatcacatttcactccaacgggacggtttcctacctcgaattcagacggttcttcttt
gagccggacatgtcttcagggaacgagtccgaagtcgtcaccattcccaacatgttggtg
ctgggcgcagcgatcatgatggagaacctgcccttcgcggtgcggctgatgatcagcgcc
accttcaagaccttcaaggagggtccgttcctcaccaagacggtcggggagctgatgtgg
ggctacgacagcgggctggtggacttcctcaacaagtacctgcccggcatgctgccctcc
acggggaagttcggcctctttgctgacttcaacaactccaacaccggcctcttcaccatc
cacaccgggcaggacgacatccggaaggtgcacatggtggactcgtggaacggcctgacg
aagctgagcaactggaactccccccagtgcaacatgatcaacggcaccgccggccagatg
tggccccccttcatgagcagagagagcacgttgcctttctacagcccggacgcctgcagg
tccctggagctggtctaccagcgagacggggtgatggaggggatccctctgtaccggtac
gtggctcccaagaccatgttcgccaacgggtcggattacgcccccaacgagggcttctgc
ccctgcaggcagtcggggctgctgaacgtcagcagctgcaggcacaactctccggtcttc
atctctcatcctcacttcttcaacgccgacccggtgctgctggacttcgtgcacggcctg
aaacccacagaggacgagcacggcctcttcatagacatccatccactcaccggcgtcccg
ctgaacgtgtccatccgcctgcagctcaacctctacatgaagagagtgtcggccattacg
gaaactggaaagatttctgaggtggtgatgccgatgatctggtttgaggaaagcggctac
atcgacgggccgatcctctccaccttctacaccaacctggtggtgctgccggccgtgatg
gagtacatgcagtacggcttcatcgtcctcggcgtggtcatcatcctgatcgccgccctg
gtgcatcaccgagtgaaggtctccgatgaagagcgagtaaacaaaggagaaatcaaagga
gaaatcaaaggagaaatctatcggaaataa
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