Cyclopterus lumpus (lumpfish): 117740664
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Entry
117740664 CDS
T09199
Symbol
trim25l
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117740664 (trim25l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117740664 (trim25l)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117740664 (trim25l)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117740664 (trim25l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-RING_5
Mer2
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
117740664
NCBI-ProteinID:
XP_034403084
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All DBs
Position
2:6891636..6896458
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AA seq
814 aa
AA seq
DB search
MSSKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMGCIKDYWSKDNPKGGYSCPQCRKTFS
PKPSLSRNTMLAEAVEQLRKGALKADVRESMRNARSSSGAKGKPSSSSPSYSSPTAVPCD
MCKGEQRAAVKSCLSCMSSYCAAHLKPHSTKKALRAHELIAPTANLAEKICTQHKYLQEF
FCRQCKMFVCWLCTSNQHKGHECVSTKVERLEKQKVLSEMQTENQQRVKVREQELKDMKK
MMEGMKRSADRVHGDTEQALAELQRSMERLQELLEETLDQAGLEKMGQAQEVIDSLEAEV
KELRSRETEMRDLSLCEDNIRYLEACESVCSPLESGDLPAVTVNPDASFEPAREAILDLR
DRVEDLCNQELGKITKQVNDVTLFTLKDSNRSAGPKEGILKLFGLGPRNTSSRPPAAPPS
ISVGARGADRRGIGLKSQDVRSRDAPRADRGNTSSPRLQDRQKREEREPVRETNPRPSPS
PRPSPTPSRKASQSQSLWSRSSQSQAVPANIPTPIPATPTPAPAPASSGGSGFSRMASIS
SLFRSHRRGTTPASPAGNTLSAGGNPWGMAALSETPTEINPGLFLDLPTPVSAMHAPAFP
ALREISLDSIQAPEPRSREEFLQYSVTLTLDTNTAHRRLVLAEGNSKATLQPAAQPYPDN
PQRFDGWTQVMCASPLYAQRCYWEVEWRGRGSSMGVTYGAMARKGTAARSGLGYNAQSWT
LELSDTCCSAMHDNEKRDIPVTYSPRLGLYLDLSTGTLAFYSVAESMTHLHTFRANFTQP
LYAAFGVGSGVGVGLDFALGQFSSSSDSIKICPM
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaaactgtggaccgaggagcagttcaactgccccgtgtgtctggatctcccg
aacgacccggtcaccatcccctgcggccacagctactgcatgggctgcatcaaggactac
tggagcaaggacaaccccaaggggggctacagctgcccccaatgccgaaagaccttctcc
cccaagccctccctgtccaggaacaccatgctggccgaggcggtggagcagctccgcaaa
ggggccctcaaggccgacgtgcgggaatccatgcggaacgctcgctcctcgtccggagcc
aaagggaagccctcctcctcctccccctcctactcttcgcccacggcggtgccgtgcgac
atgtgcaaaggggagcagcgggcggcggtcaagagctgcctgtcgtgcatgagctcgtac
tgtgcggcccacctgaagccccactccaccaagaaggccctgagggcgcacgagctgatc
gcacccaccgccaacctggcggagaagatctgcacccagcacaagtacctgcaggagttc
ttctgccgccagtgcaagatgttcgtctgctggctttgcaccagcaaccagcacaagggc
cacgagtgcgtgtccaccaaggtcgagcgcctggagaaacagaaagtgctgtcagagatg
cagactgagaatcagcagagggtgaaagtccgcgagcaggagctgaaggacatgaagaag
atgatggagggtatgaagcgttccgccgacagggtgcacggcgacacggagcaggcgctg
gcggagctgcagcgttcgatggagcgtctgcaggagctgctggaggagacgctggaccag
gcgggcctggagaagatgggacaggcccaggaggtcatcgacagcctggaggccgaggtc
aaggagctgaggagcagggagacggagatgagggacctgtcgctctgcgaggacaacatc
cgctacctggaggcatgcgagtcagtgtgcagcccgctggagtcgggcgacctgcccgcc
gtgacggtgaaccccgacgcgtcctttgagcccgcgcgggaagccatcctggacctcagg
gaccgggtggaggacctgtgcaaccaggagctgggcaagatcaccaaacaagtcaacgac
gtcactctgttcacgctgaaagactccaaccggagcgcagggccaaaagaagggatttta
aaattgttcggtctgggccctcgcaacacgagcagccgtcctccagctgctccgcccagc
atctcggtgggagcgcggggcgcggacagacgaggtatcggcctcaagagtcaagatgtg
aggagcagagacgccccgcgagcagacagaggaaacacaagctcacccagactccaagac
cggcagaagagggaggaacgagagccagtgagggagaccaaccctagaccgagtcccagt
cccagacccagccccactcctagccgcaaggcgtctcagtctcagtctctttggagcagg
tccagccagagccaggctgtcccagcaaatatccctactccaattccggccaccccgacc
ccagctccagctccagcatcatccggagggtccggtttcagtcggatggcgtccatcagc
agcctgttccgctcccaccggcgtggcaccaccccggccagcccggccgggaacacgctc
tcagcgggaggaaacccatgggggatggccgctctgtccgaaacaccgacagaaattaac
ccaggcctcttcttggacctgcccaccccggtctcggcgatgcacgcgcccgctttcccc
gcactgagggagatcagcctcgacagcatccaggccccggagccgagaagcagggaggag
ttcctgcagtactcggtgaccttgacccttgacaccaacacggcccaccggcggctggtt
ctcgccgagggcaactccaaggccaccctgcagccggcggcgcagccctaccctgacaac
ccccagcgcttcgacggctggacccaggtgatgtgcgcgagcccgctgtacgcccagcgc
tgctactgggaggtggagtggcgggggcggggctcctcgatgggcgtgacctacggcgcg
atggcgaggaagggcacggctgcccgctcggggctcggctacaacgcccagtcctggacc
ctggagctgtcggacacctgctgctcggccatgcacgacaacgagaagagggacataccg
gtcacctactccccccgcctgggcctctacctggacctgtccacggggacgctggccttc
tacagcgtggcggagagcatgacgcacctgcacaccttccgcgccaacttcacacagccg
ctttacgccgccttcggggtgggcagcggggtcggggtggggctggacttcgccctcgga
cagttcagttccagctccgacagcatcaagatctgtcccatgtga
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