Cyclopterus lumpus (lumpfish): 117740709
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Entry
117740709 CDS
T09199
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00600
Sphingolipid metabolism
clum01100
Metabolic pathways
Module
clum_M00094
Ceramide biosynthesis
clum_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117740709 (sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117740709 (sptlc1)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
117740709 (sptlc1)
Amino acid related enzymes [BR:
clum01007
]
Aminotransferase (transaminase)
Class II
117740709 (sptlc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
PAD
Motif
Other DBs
NCBI-GeneID:
117740709
NCBI-ProteinID:
XP_034403136
Ensembl:
ENSCLMG00005022065
UniProt:
A0A8C3AWB8
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All DBs
Position
12:complement(19258843..19268570)
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AA seq
472 aa
AA seq
DB search
MASGQQWVLVEMVQAFYEAPAYHLILEGILILWIIRLLFSKTYKLHETYKLTEKEKEDLI
EEWQPDPLVPPVSKDHPSLSYDVVTGPPSHKITINGKECINFASFNFLGLLDNERVKQKA
LASLKKYGVGTCGPRGFYGTFDVHLELESRLAKFMKTEEAIIYSYGFATIASAIPAYSKR
GDIIFVDEAACFSIQKGLQASRSFIKYFKHNDMEDLERMLKEQELEDQKNPRKARVTRKF
IVVEGLYINTADICPLPELVTLKYKYKVRIFLEESMSFGVLGEHGRGVTEHFGVNIDDID
LISANMENAVASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPE
IFTVLRGKCKHVHKALQGIPGLKLVGVQSAPALHLQLERSSGSRDSDMQLLRTIVEYCLE
RRVALTLARYLEKEERFLPSPSIRVVVTVEQTEEDVHNAVSCIQEAASAVLK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggacagcaatgggtgttggtggaaatggttcaagcattttacgaggctccg
gcttatcacctcatcctggaggggatcctcatactgtggatcatcaggcttctgttctct
aagacctataaacttcacgagacctataagctgacggagaaggagaaggaggacctcatt
gaggagtggcagccggatcctctcgttcctcctgtttccaaagaccatccttccctcagt
tatgatgttgtcacaggaccgcccagccacaaaatcaccatcaatggaaaagagtgcatt
aactttgcttcatttaacttcctgggtctgctggacaatgagcgggttaagcaaaaagct
ttggcatcactgaagaaatacggtgtgggaacatgtggtcccaggggcttctatggaacc
tttgatgttcacctggagctggagagtcgtctggccaaattcatgaaaacagaagaagcc
atcatctattcgtacggctttgcgaccatcgccagtgcaatccccgcctactccaagagg
ggggacatcatctttgtggacgaagcggcctgcttctccatccagaagggtcttcaggcg
tcccgcagcttcatcaaatacttcaaacacaatgacatggaggatctggagaggatgctc
aaagagcaggagctggaggaccagaagaatcctcgtaaagcccgagtgacccggaagttt
attgttgtggagggtctgtacatcaacactgcggacatctgtcctctgcctgaactggtt
acgctgaagtacaagtacaaggtgcggatctttctggaggagagcatgtcgtttggtgtg
ctgggagaacacggccgaggagtcacggaacactttggggtcaacatcgatgacattgac
ctgatcagcgccaacatggagaacgccgtggcgtccatcggaggcttctgctgcggacgc
tcctttgtcatcgaccaccagcggctctcaggtcagggctactgcttctctgcctccctg
cctcccatgctggctgccgccgccatcgaggccctcaacatcatggaggaggatccagaa
attttcactgtcctgaggggaaagtgcaaacacgtgcacaaggctttacagggcattcca
ggtctgaagttagttggagtgcagtctgccccggctcttcacttacagctggagagaagt
tccggctccagagactctgacatgcagctgctccgcaccattgtagaatattgtctggag
aggcgtgtggctctgactctcgcccgctacctggagaaagaggagcgcttcctcccctcc
cccagcatcagggtggtggtcaccgtggagcagacggaggaggacgtccacaatgccgtg
tcttgtatccaggaggcggcttcggctgtcctcaaatga
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