KEGG   Cyclopterus lumpus (lumpfish): 117740775
Entry
117740775         CDS       T09199                                 
Name
(RefSeq) WD repeat-containing protein 70
  KO
K24752  WD repeat-containing protein 70
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117740775
   03036 Chromosome and associated proteins [BR:clum03036]
    117740775
   03400 DNA repair and recombination proteins [BR:clum03400]
    117740775
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117740775
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Histone modification proteins
   Other histone modification proteins
    117740775
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     117740775
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_Aladin DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N CFAP251_N WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR75_2nd PEP5_VPS11_N Ge1_WD40 Beta-prop_HPS5 WD40_RFWD3 MIOS_WD40 AF-4
Other DBs
NCBI-GeneID: 117740775
NCBI-ProteinID: XP_034403218
Ensembl: ENSCLMG00005014985
UniProt: A0A8C2ZWM2
LinkDB
Position
12
AA seq 645 aa
MDPNKVDEDKMNDDGEIASVMGFSGFGKKARTFDLEAIFEQTRRTAIERSQQVLEERQMD
DQMEQEGESSRSVKSSLLALKDKAAAETSRKQSESSSDSGSDSDSDSELIGPPLPPQLTD
QDDDELGPLTRASGSTAHSDEDDDDDGEAQDDDDDNPVKKIPDTHEITLQHGTKTVSALA
LDPSGARLVTGGYDYDVRFWDFAGMDQAVQAFRSLQPCECHQITSLQYSNTGDVILVVSG
NAQAKVLDRDGFNVMECVKGDQYIVDMAKTKGHTAMLNNGCWHPKIKEEFMTCSNDGTVR
TWDLSSGKKHKSVFKPRSFQGKKVVPTCCTYSRDGKLIAAGCQDGTIQIWDRNLSVHTKF
HCRQAHIPGSDTSCIAFSYDGVTLASRGGDDTLKLWDIRNFKKPVNVATGLNNYFTMTDC
CFSPDDRLLVTGTSVKKDGGNGKLAFFDRASFQKVYEIEVTNASVVRCLWHPKLNQIMVG
TSNGLAKVYYDPVKSHRGAKLCVVKSQRKERQAETLTQDYIITPHALPMFREARQRSTRK
QLEKDRLDPKKSNKPEPPVSGPGRGGRVAAHGGTLSSFIVKNIALDKTDDSNPRQAILRH
AKEASDNPYWVAPAYKQTQPVPLFAEESEDDEEAEKEPEWKKRKI
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggatcccaacaaagtggatgaagacaagatgaacgatgatggagaaattgcatccgtc
atgggattctcaggttttggtaagaaggcccgcacatttgacttggaagccatttttgaa
cagacccgtcgaacagccatcgagaggagtcagcaagtattggaggagcggcagatggat
gatcagatggagcaggaaggggaaagctcccgatcagtcaagtcatcgctccttgctctg
aaagacaaagctgcagctgagacttccagaaaacagagtgagagcagtagtgacagtggt
tcggactcggactcagattctgagcttattgggcctccactgcctccgcaacttacagac
caggatgatgatgagcttgggccactgactcgcgcatcaggcagcacggctcatagtgat
gaagatgatgatgatgatggggaggcacaagacgatgacgatgataatccagtgaagaag
attccagacactcatgagatcactctgcagcacggcaccaagacagtatcggctcttgcc
ttagacccctctggagcccgtctggtgactggtgggtatgattatgatgtgcgtttctgg
gattttgccgggatggaccaggctgtgcaggccttcagatccctccagccctgtgaatgc
catcagatcacgtccctgcagtacagcaacactggtgatgtcatcctggtggtttctggc
aatgcacaggccaaggtgttggaccgtgatggcttcaatgtcatggagtgtgtgaaggga
gaccagtacattgtggatatggctaaaaccaagggtcacacggctatgcttaataatggc
tgctggcaccccaagattaaagaagagttcatgacgtgctccaatgacggcactgtgcgc
acatgggacctgagctctgggaagaagcacaagtctgtgttcaaaccgcgttccttccag
gggaagaaggtcgtccccacatgctgcacctacagccgcgatgggaagctcattgcagct
ggctgccaggatggcaccatccagatctgggacagaaacctcagcgtccatacaaaattc
cactgtcggcaagcacacatcccaggatcagacacgtcctgcatcgccttttcctacgat
ggcgtgactctcgcttcacgtggaggggatgacactctcaagttgtgggatatacgtaac
ttcaagaagcctgtgaatgtagcgactggactgaacaactactttacaatgaccgactgc
tgttttagccctgacgacaggctcctcgtaacggggacctctgtgaaaaaggacggggga
aatgggaagttggctttctttgaccgagcttcctttcagaaggtctatgaaatagaagtc
accaatgcaagcgtcgtccgctgtctgtggcacccaaagcttaaccagataatggtggga
acttcaaatggactggccaaggtctactatgaccctgttaaaagccacagaggggcgaag
ctgtgtgtcgtaaagagccagcggaaagagagacaagcagagacgctaacgcaagattac
atcatcacacctcatgccttacccatgttcagagaggcccggcagcggagtacacgaaaa
cagctggagaaggaccgactagacccaaagaagtccaacaaacccgagcctcctgtgtcc
ggaccaggtcgaggaggaagagtagcagctcatggtggcactctgtcttcattcatcgtg
aagaacattgctttagataaaacggatgacagtaacccacgacaggcaatcttacgtcac
gccaaggaagcttcggataacccttactgggttgccccggcatacaaacagacccagcca
gtgcctttgtttgctgaggaatcggaggatgatgaggaagctgaaaaggaaccagagtgg
aagaaacgcaagatctga

DBGET integrated database retrieval system