Cyclopterus lumpus (lumpfish): 117740806
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Entry
117740806 CDS
T09199
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03420
Nucleotide excision repair
clum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117740806 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
117740806 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
clum03051
]
117740806 (rad23b)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117740806 (rad23b)
Proteasome [BR:
clum03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117740806 (rad23b)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117740806 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
CUE
Metal_resist
OTU1_UBXL
UBA_3
Ubiquitin_5
TECR_N
Motif
Other DBs
NCBI-GeneID:
117740806
NCBI-ProteinID:
XP_034403269
Ensembl:
ENSCLMG00005010887
LinkDB
All DBs
Position
12:complement(7495453..7500447)
Genome browser
AA seq
385 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDEEETVKVLKEKIEKETGKENFAVDGLKLIYAGKVLNDDTALK
EYKINEKNFVVVMVTKAKTAPATPQPSPATLATSIAAPAAPAASSSGSGSASDRASTDDK
PEETQSSTAEPASTPVGSSEASTNTNLIDEAVSNLVTGPSYDAMVTEMMLMGYEREQVVA
ALRASFNNPDRAVEYLLTGIPGREPGIAAGPVGLVTPVSVQAAPIGGISLPANTGSSPSA
GGGNPLSFLRNQPQFHVMRQLIQQNAALLPALLQEIGRENPELLQEISSHQEQFIQMLNE
PNPEAVPAGGGGGAGGAGGAGGIAGDAPGGSHMSYIQVTPQEKEAIERLKALGFPEGLVI
QAYFACEKNENLAANFLLQQNFDDD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcagataactttgaaaaccttacaacagcagacgttcaaaatcgacatcgatgaagag
gagacggtgaaggtattgaaagagaagattgaaaaggagacggggaaggaaaacttcgca
gttgatggactgaaactgatatatgctggtaaagtcctcaacgatgacacggctctcaaa
gaatacaaaatcaatgagaagaactttgtggtcgtcatggtgacgaaggctaaaacggcc
ccagccactccgcagccgtcacctgccactttggctaccagcattgcagcccccgcagcc
cctgcggcctcatcgtccggctctggaagcgcatcagatcgagcctccaccgacgacaaa
ccggaggagacgcagtcttcgaccgccgagccagcgtccactcccgtcggaagctccgag
gcgtcaacaaacacaaacctgattgatgaggcggtgtctaatctagtgacgggcccatca
tacgacgccatggtgaccgagatgatgctcatgggctacgagagggagcaggtggtagca
gctctgagagcgagcttcaacaacccagacagagctgtggagtacctgctcacaggtatt
ccaggcagagaaccgggcattgcagcgggaccagtggggttggtgactccagtgagcgtt
caagctgcacccataggtggtattagccttcccgccaacactggctcttctccaagtgct
gggggaggcaacccgctcagtttcctgagaaatcagccgcagttccacgtgatgcgacag
ctgatccagcagaatgccgccctgcttcctgccctgctgcaggagatcggccgggagaac
cctgagctgctgcaggaaatcagcagccaccaggagcagttcatccagatgctgaatgaa
cccaatccagaggcggtgccggcaggtggcggaggtggagcgggaggagccgggggagcc
ggagggatagcgggtgacgcacccggcgggagtcacatgagctacatccaggtcacgcca
caggagaaagaggccattgagaggctaaaagctttaggttttccggagggactcgtcata
caagcctactttgcatgtgagaagaacgagaacttggccgccaacttccttttacaacag
aactttgacgacgattaa
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integrated database retrieval system
