Cyclopterus lumpus (lumpfish): 117740814
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Entry
117740814 CDS
T09199
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
clum04144
Endocytosis
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117740814 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117740814 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
117740814 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117740814 (nedd4l)
04121 Ubiquitin system [BR:
clum04121
]
117740814 (nedd4l)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117740814 (nedd4l)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117740814 (nedd4l)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117740814 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
MUG113
Motif
Other DBs
NCBI-GeneID:
117740814
NCBI-ProteinID:
XP_034403283
Ensembl:
ENSCLMG00005008380
LinkDB
All DBs
Position
12:complement(7021433..7061973)
Genome browser
AA seq
1186 aa
AA seq
DB search
MHISLQRSNGSSTGDFRGYADDVPPPCYTPPGPAPAYSERLQPDVPRHPPPPYYDPDTLN
SQTFMTEPNLPKRRVFSIGSNGHTMYSRGQPNISVGGICIQRNSPDGSDVQHFRIHPYGG
NGWSVQQQSLDQCSVVNGGTQRLVFQLQQSQNQDPSQGRPQSAASQDECTDVGVASSRGS
RVVRYPRIRLERRSSQPRLLLENQHKETGAESQATEEIQTDTERTEARNRPNGCTFKIRG
DSSQRQPHFKIYFTPGGGGDQDVSCGNDLTNNNLKATSKNGIFHLTQTRDDFLGQVDVPL
SHLPTEDPAMERPYTFKDFLLRPRSHKSRVKGYLRLKMAYLPKQGGPEEEAGEMREEAEG
WDESVDSGSQRPQQLLPPLPPGWEEKVDNLGRTYYVNHNKRNTQWKRPSNTDVISETESD
NQQRQINQEAHRVFRSRRHISEDLENEHLEPRDIDNSWELITEEDPNDSLAQSQPGTSSV
LTPQLPPTPASHEFSEDLNLRLSLTPDTNGEVPGPSAALSQLSSRLRSSSMTDGVSDPTQ
APPLMGSQTRRTRAQTVSGGEESMSPSATAYALTTPGLPPGWEERKDGKGRTYYVNHNSR
TTTWTRPIVQLTEDGASTSAAAASGGASALAPPSTPSSSSNASNNHLHEPLIRRPRSLSS
PTVTLSTPLEGANNVQVRRAVKDTLSNPQSPQPSPYSSPKTTPKAQQSFLPPGWEMRIAP
NGRPFFIDHNSKVTTWEDPRLKYPVHLRNKNSIEPGELGPLPPGWEERVHSDGRTFYIDH
NTKNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFE
ESYRRIMSLKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATD
NYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVFHGKLLDGFFIRPFYKMMLGKQISLKDM
ESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPSGSDMVVTNENKKEYID
LVIQWRFVNRVQKQMNAFLEGFTELILIDLIKIFDENELELLMCGLGDVDVNDWRQHTVY
KNGYCPNHPVIQWFWKVVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQ
WGTPEKLPRAHTCFNRLDLPTYDSFEDLREKLLMAVENAQGFEGVD
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgcacatctccctccagcgctccaatggatccagtactggagatttccgtggttatgcc
gatgatgtcccgccaccctgttatacgcctccgggacctgcgcccgcctattctgagcgg
ctccaaccagacgttccacggcacccgccgcctccgtactacgacccagatactttaaac
tctcaaacttttatgacggagccgaacttgcccaaacgcagggtctttagcattggctcc
aatggccatactatgtatagcagaggccaacctaatatcagtgttggtggtatttgtatc
cagaggaactctcctgatggttctgatgtccagcatttcagaatccacccctatggtggt
aatggctggtctgtccagcagcagagcttggaccagtgctctgtggttaatggtggaaca
cagaggctcgtgtttcagctccagcaaagtcagaaccaggatccgagccagggcaggcca
cagtctgctgcatcccaggacgaatgcacagatgttggcgttgccagctcaagaggtagc
cgcgttgtgcgttacccaagaattcgactggagagacgctcgtctcaaccgaggctgttg
ctggaaaatcaacacaaggaaactggcgcagagagccaagctacagaggagatccaaacc
gacacagagagaacggaagcaagaaaccgacctaatgggtgtactttcaaaatccgtggg
gattcttcccagaggcagcctcatttcaagatctattttaccccaggcggagggggagac
caggatgttagctgtggcaatgatttgacgaataacaatctcaaggctacttccaagaat
ggcattttccatctcacacagacgagagatgatttcctgggacaggttgatgttcctctc
agtcatttgccgacagaggaccctgctatggagcggccgtacacatttaaagacttcctg
ttacggcccagaagtcacaagtccagggtgaagggttacctgcgtctgaagatggcctat
ctgcccaaacaaggaggaccagaggaggaggctggagagatgagggaggaagctgaggga
tgggatgagtctgtggactcgggctcccagcgaccccagcagctgcttcctccgttgccc
cctggctgggaagagaaggtggacaacctcggacgcacctactatgtcaaccacaacaaa
cgcaatacacagtggaaaaggccttccaacacggatgtgatttcagagaccgagagtgac
aatcaacagcggcagatcaatcaggaagcgcaccgtgttttccgttcgagacgccacatc
agtgaagacctagagaacgagcacctggagccgagggacattgacaattcctgggagctc
atcacagaagaggatcctaacgacagcctggcccagtctcagcccggcacttcctccgtc
ttgacgccacaactaccgccaacacccgccagccacgagttttccgaggatttaaatctg
aggctgtcgctcactcccgataccaacggcgaagtgccggggcccagcgccgctctgagc
cagctatcaagcagactgcgatcctcaagtatgacggatggcgtcagcgatccgacccaa
gctcctcctcttatgggttcccagaccagaagaacaagagctcaaacagtctcaggtggt
gaggagtctatgtctccctcggcgactgcttacgccttgaccacccctggcctgccccct
ggatgggaggagaggaaggacggcaagggacgaacttattacgtcaaccataacagccgc
accactacgtggactaggccaattgtgcagctgactgaagacggagccagcacctcagca
gcagcagcatcaggcggagcctcggccctggcacccccatccaccccctcctcctcttcc
aatgcctccaacaaccacctccatgagcccctaatccgacgacctcgtagcctcagctcc
cctactgtcaccctttccacccccttggagggagccaacaacgtccaggtgcggagggct
gtgaaggacacgttatccaacccgcagtccccccagccgtcgccctacagctcccccaag
acgacacctaaggcacagcagagcttcctgcccccgggctgggagatgaggatagccccc
aatggacggcctttcttcatcgaccacaacagcaaagtcaccacctgggaggatcccagg
ttgaaatacccggtccatttgaggaataagaactcaattgagcccggggaacttggtcct
cttcctcctggatgggaagaaagagttcactcagacggacgcaccttctacattgaccac
aatacaaagaacacgcagtgggaggatcctcgtctgcagagtcccgctatcacaggacct
gccgttccctactccagagagttcaagcagaaatacgactactttaggaagaagttgaag
aagccggcggacatccccaaccgctttgagatgaagttacacaggaacaacatctttgag
gagtcgtaccgtcggatcatgtccctgaagaggccggatgttctgaaggcacggctgtgg
atcgagtttgagtcagagaaaggactggactacggcggcgtggccagagagtggttcttc
ctcttatccaaggagatgttcaacccttactacggcctgttcgaatactcggcgacagac
aactacactctccaaatcaatcctaactccggcctgtgcaacgaggaccacctctcctat
ttcaagttcatcgggcgtgtggcaggaatggctgtgtttcatggcaaacttctggatggt
tttttcatccgacccttctacaagatgatgctgggaaaacagatctcccttaaagacatg
gagtctgtggacagtgaatactacaactctctgaagtggatcctggagaatgatcccact
gagctggacctcaggttctgtatcgacgaggacaactttggacagacgtaccaggttgac
ctgaagcccagcggctcagacatggtggtcaccaacgagaacaaaaaggagtacattgac
ctggtcatccagtggaggtttgtcaatcgagtccagaagcagatgaacgccttcttggag
ggcttcactgagctcattctcatagacctgattaagatctttgatgaaaatgaactggag
ctgctcatgtgtggtctcggcgacgtcgacgtcaacgactggaggcaacacacggtttac
aagaacggctactgtcccaaccatcctgtgatccagtggttctggaaggttgtcctgttg
atggatgctgaaaagaggatccgactcctccagtttgttacgggaacgtcacgagtgccc
atgaacggctttgccgagctctatggttctaatggacctcagctgttcacaatagagcag
tggggaacaccagaaaagctgccaagagctcacacatgtttcaaccgcttggatctgccc
acttatgattcatttgaggacctgagagagaaactcctcatggctgtggagaacgcgcag
ggcttcgagggggtcgactaa
DBGET
integrated database retrieval system
