Cyclopterus lumpus (lumpfish): 117740896
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Entry
117740896 CDS
T09199
Symbol
gtf3c5
Name
(RefSeq) general transcription factor 3C polypeptide 5
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117740896 (gtf3c5)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
117740896 (gtf3c5)
TFIIIC, fungi type
117740896 (gtf3c5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Pox_Ag35
TFIIF_beta
PBP1_TM
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
117740896
NCBI-ProteinID:
XP_034403440
Ensembl:
ENSCLMG00005017674
LinkDB
All DBs
Position
12:complement(15913634..15919851)
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AA seq
533 aa
AA seq
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MNTADMADSIGPKLDFTLKELTLSCPTEDVDVPGSSSRVELWDNKLVCVEYPAVVQSVDK
MLDTLGGEKGVSKTYAHPNRRLELRFRPQDPFCHSLCGNRFPSSNLVLKVRRRVRKKDPT
DAKIHMEILGIIGTTYKFQGMADFQCLAVHSEGGEDISLYNKIILRKSENQEFFHQPMPL
FLPPASFSRLDSPVDYYYRPDIYQRSPQVPISRNNFIGLNRARRPHNAIFVSFADPTVPT
ECLEAAKANWARVCVKEKDKQVEEQLRKMFESRHIWSRNAVKANINIHPDKLKLLLPVFA
YYMVTGPWRSLWVRLGYDPRKSPESKNYQILDFRIRCSTKHGYLLSDIPVKAKRSALNYS
LPITFNKSGPQAASVMELPTQEGPSSSRDPVPITFQQKESSYIFREGMLPPHRQMFYQLC
DLHVECIKQEVQQMADEQVCDERDGWCVLGTTDKLRDIISAMIKKIIRAQRPSLPEFPKK
RRRIGLNKERDKDEEDELPEDENKDDEDEYDEDEFQPSEGSENEMETEILDYM
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagccgacatggcggactccatagggccgaagctggacttcaccctgaaagag
ctcactctctcctgtccgacggaagacgtcgacgtgcccggcagctcgtcccgggtggag
ctgtgggacaacaagctggtgtgcgtggagtatccggcggtggtccagagtgtggacaag
atgctggacactctcgggggtgaaaaaggagtgtccaaaacctacgctcaccccaacagg
cgtcttgagctgcgcttccgacctcaggaccctttctgtcactctctgtgcggaaaccgc
ttcccatcgagcaacctcgtcctcaaagtgcgccggcgcgtgcggaaaaaggaccccacg
gacgctaagatccacatggagatactcggaatcataggaacgacgtacaaattccaaggg
atggcggactttcagtgcctcgctgtgcactcagaaggcggagaagacatctctttgtac
aacaagatcatcctccgtaaatccgagaatcaagagttctttcaccagcccatgcccctc
ttcctcccaccagccagcttctcccgcctcgactctcctgtggactattactaccggccc
gacatctatcagcgttcaccccaggtgcccatcagcaggaacaactttattgggttgaat
cgagctcgccggccccacaacgccatttttgtcagcttcgcggatcccaccgtgcccacc
gagtgcctcgaggcagccaaggccaactgggcacgagtgtgtgtgaaggagaaagacaag
caggtcgaggaacaattgagaaagatgtttgagagccgacacatctggtcacgaaatgca
gtcaaggccaacatcaacatccaccctgataaactgaaactgctgctgcccgtcttcgcc
tactacatggtgacgggaccctggaggagtctgtgggtgaggctgggctacgacccccga
aagagcccagaatccaagaactaccagatactggactttaggatccgctgtagcaccaaa
cacgggtatttattatctgacataccagtgaaagccaagaggagtgccctgaactacagt
ctgccgatcacattcaacaaatcaggtccgcaggcagctagtgtgatggagcttccaact
caggaggggcccagctccagtcgagatccagtcccgatcactttccagcagaaggagtcg
tcctacattttcagagagggcatgctgcctcctcacagacagatgttttaccagctctgt
gatttgcatgtggaatgcatcaaacaggaggttcagcagatggccgatgagcaggtatgc
gacgagcgggacggctggtgtgttctcggcaccacggacaagctgagggacataatctca
gccatgatcaagaagatcatccgagcccagagaccatcgttgccggaattccccaagaaa
cgcagacgaataggcctgaataaggagagagataaggatgaagaggacgagttgccggaa
gacgagaacaaggacgacgaagacgaatatgatgaggatgagtttcagccgtcggagggc
agcgaaaacgagatggagacagaaattctggattacatgtaa
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