Cyclopterus lumpus (lumpfish): 117740918
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Entry
117740918 CDS
T09199
Symbol
abcb11b
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117740918 (abcb11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117740918 (abcb11b)
04147 Exosome [BR:
clum04147
]
117740918 (abcb11b)
Transporters [BR:
clum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
117740918 (abcb11b)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117740918 (abcb11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
AAA_15
ABC_ATPase
AAA_21
Rad17
AAA_30
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117740918
NCBI-ProteinID:
XP_034403468
Ensembl:
ENSCLMG00005017081
LinkDB
All DBs
Position
2:complement(6347433..6364005)
Genome browser
AA seq
1361 aa
AA seq
DB search
MPTGSVKLQSIKKLGHENHSYDFSNEEPAGSNKATTSSKDDGKNQGDADQPAIRVGFFQL
FRFATCNDVLMMVVGGMCAVLHGSAQPLMLLVFGLLTDTFIEYDIELNELHDVRKECVNN
TIQWKRNYTAAGGLMPPQWDWSLMNNSTLEMFTALKSRTCGLLDIEHEMTNFAFYYVGIA
AAVFLLGYFQISLWVTAAARQIQLIRKMYFSKVMRMEIGWFDCTSVGELNTRMSDDINKI
NDAIADQVSIFLQRFTTFVCGFCIGFVKGWKLTLVIVAASPLIGLAAGLMAMFVARLTGL
ELQAYAKAGAIADEVLSSIRTVAAFGGEKKEVQRYDKNLISAQRLGIKKGLIMGFFTGYM
WLIIFLCYGLGFWYGSSLVVDTEEYTPGTLLQVFFGVLIAAMNLGQASPCLEAFAAGRGA
ATTIFETIEREPEIDCLSEVGYKLDRVKGDIEFHNVTFHYPSRPEVKILDKLSVPVKSGE
TTAFVGPSGAGKSTAIQLIQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVLFA
TTITENIRYGRPGVSKEDIIAATKEANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAI
ARALVRNPRLLLLDMATSALDNESEAIVQEALDKVRKGRTTISIAHRLSTIKNADVIVGF
ERGRAVEWGKHNELLERKGVYFTLVTLQSQGDEALNEKARQMADNEEEPARLNLSRAGSY
RASLRASLRQRSRSQLSNLIPESSVPMVGELGPRAYSVSQADKFTNAIPEDEEEPVEPAP
VTRILKYNLPEWPYMVFGSFGAAINGGVNPVYSLLFSQVLATFSVTDPVLQRKEIDGICL
FFVMVGVVSFFTQMLQAYAFSKSGELLTRRLRRLGFQAMLGQEIGWFDDHKNSAGALTTR
LATDASQVQGATGSQIGMIVNSLTNIGVAIIMSFFFSWKLTLLILCFLPFIALSGGFQAK
MLTGFAKQDKQAMETAGQISGEALNNIRTIAGLGKERLFVDTYEAQLDAPYQAALKKAKV
YGACYGFSQCVIFLTNSASYRFGGYLVQQEGLHFSLVFRVISAIVTSGTALGRASSYTPD
YAKAKISAARFFKLLDRVPLISVYSDKGDKWENFEGNIEFIDCKFTYPTRPDIQVLNGLN
VSVKPGQTLAFVGSSGCGKSTSVQLLEKFYDPDQGRVLIDGHDSTRVNVPFLRSKIGIVS
QEPILFDCSIEENIKYGDNVRDISINEVISAAKKAQLHDFVMSLPEKYETNVGAQGSQLS
RGQKQRIAIARAIIRDPKILLLDEATSALDTESEKTVQGALDKAREGRTCIVIAHRLSTI
QNSDIIAVMSRGFVIEKGSHDQLMALKGAYYKLVTTGAPIS
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccggatcagtgaaattgcaaagcataaaaaaactgggacatgaaaaccacagc
tacgacttttccaatgaagaaccagctggctccaataaggccacaacaagttctaaggat
gatgggaaaaaccagggagatgcagatcaacctgcgataagggttggcttctttcagctg
ttccgtttcgccacgtgcaacgatgtgctgatgatggtggtgggcggcatgtgcgccgtg
ctgcacggctcggcccagcccctcatgctgctggtgttcggcctgctcaccgacaccttc
atcgagtacgacatcgagctcaacgagctgcacgacgtcaggaaggagtgcgtgaacaac
accatccagtggaagaggaactacacggcggcgggcggcctgatgccgccacagtgggac
tggagcctcatgaacaattcaacattggagatgttcacagcgctgaagagcaggacgtgt
gggcttctcgacattgaacatgaaatgaccaattttgccttctattatgttggaattgca
gcggctgtgttcctgctgggatactttcagatctccctgtgggtgacggccgctgccagg
cagattcaactcatcaggaaaatgtacttcagcaaagtgatgaggatggagatcggctgg
ttcgactgcacctcggtgggggagctcaacactcgcatgtcagatgacatcaacaagatc
aatgatgccattgcggaccaggtttccattttcctgcagcgattcaccacctttgtgtgc
ggtttctgcatcggctttgtgaagggatggaagctgacgcttgtcattgtcgcagcaagt
ccactgatcggtcttgcagctggtcttatggctatgttcgtggcgaggctaacggggttg
gagctgcaggcctacgccaaagccggagccatagcagacgaggtcctctcctccatcagg
actgtggctgctttcggtggggagaaaaaagaagtgcaaaggtacgacaagaacttgatc
tcagcgcagcgcttgggcatcaagaagggtctgatcatgggcttcttcaccggatatatg
tggctgatcatctttctgtgctacggtctgggcttctggtatggctccagcctggtggtg
gacactgaggagtacacaccaggaacactactacaggtgttcttcggtgttttgatagca
gccatgaatttggggcaggcctccccatgtctggaggcatttgctgcaggccgtggagct
gctaccaccatctttgaaactattgagagagagccggagattgattgtctatctgaggtt
ggttacaagcttgacagggtcaaaggagatattgagtttcacaatgtgaccttccactac
ccctccagacctgaagtcaagatcctggacaagctcagcgttccagtgaagtcaggggaa
accacagcctttgtcgggccgagcggagctgggaagagtactgccattcagctcatccag
cgcttctatgaccctaaagagggcatggtgaccctggacggtcatgacatcagagggctg
aacatccaatggctgcgctcgctgattggcattgtggagcaggagcctgtgctgtttgcc
accaccattactgagaatatacgctacggtcgacccggcgtctcaaaggaagacatcatt
gctgccacaaaggaggccaacgcctacaacttcatcatggacctgccgcagaaattcgac
actttggtgggagagggtggaggtcagatgagcggcggccagaagcaacgtatcgccatc
gctcgagcgctggtcaggaatcctcgcctcctgctgttggacatggcgacctctgccctt
gacaacgagagcgaggctatagttcaagaggctttggataaagtacgcaagggtcgcacc
accatctccatcgctcaccgcctgtccaccataaagaacgccgacgtgatcgtgggcttc
gagcgcggccgagccgtggagtggggcaaacacaacgagttgctggagaggaagggcgtc
tacttcactctggtcacgctgcagagccagggcgacgaggctctcaacgagaaggcccgg
caaatggcggacaatgaagaagagccggcgaggctaaatctatccagagcaggcagctac
cgtgccagtttgagagcctctcttcgccagcgttcccgatctcagctgtccaatctgatc
ccagagtcttctgttcccatggtcggagagcttggccccagagcctactctgtgtcacaa
gcagacaaattcacgaatgccattccagaggacgaggaagaaccagtggagcctgctcca
gtcactaggatcctgaagtacaacttacccgagtggccctatatggtttttggatccttt
ggtgctgccataaatggaggggtcaaccccgtctactctctactgttcagtcaagtcctg
gcgacattctcagtaacggatcctgtgcttcagaggaaggagattgatggtatctgcctg
ttctttgtcatggtcggcgtggtgtctttcttcacccagatgctgcaggcttacgctttc
tccaagtctggagagctgctgacccgcaggttacggcggctcgggttccaggccatgctg
ggccaagagattggctggtttgatgatcacaagaacagcgccggagctctgacaacccgt
ctggcaaccgatgcctcacaagttcaaggagccacgggctcgcagatcggcatgatcgtc
aactctctgaccaacataggcgtggccatcatcatgtccttcttcttcagctggaagctc
acgctgctcatcctgtgcttcctgccgttcatcgccctttcgggcggcttccaggccaag
atgctcacggggttcgctaagcaggacaagcaggcgatggagaccgccggacagatctcc
ggcgaggcgctgaacaacatccgcaccattgcaggcctggggaaagagaggctctttgtg
gacacgtacgaggcccagctagacgctccgtaccaagcggccctgaagaaggccaaagtg
tacggggcctgctatgggttctcccagtgcgtcatctttttgaccaactccgcctcctac
aggtttggaggttacttagtgcaacaggaggggctccacttcagcttggtgttcagggtc
atctcagccatcgttaccagcggcacggccctcggcagagcctcctcttacacgccagac
tacgccaaggccaagatctccgcagcacgtttcttcaagctgctggaccgcgtgcctctg
atcagcgtctacagcgataagggagataaatgggagaacttcgaagggaacatcgagttc
attgactgcaagttcacctaccccaccaggccggacatccaggtcctgaatgggctgaac
gtgtcggtgaagcccggccagacactggcctttgtgggcagcagcggctgcgggaagagc
accagcgtgcagctgctggagaagttctatgatcccgaccaaggccgagtgctgattgat
ggccacgactcgacccgcgtcaacgtgcccttcctgcgctccaagattggcatcgtgtcc
caggagcccatcttgtttgactgcagcatcgaagagaacatcaagtacggcgacaacgtg
cgggacatcagcattaatgaggtcatctctgctgccaagaaggcccagctccatgacttt
gtcatgtcacttcctgagaaatacgagacaaacgtcggcgcccagggctctcagctgtct
cgcggtcagaagcagcgtatcgccattgccagggcgatcatccgcgaccccaagatcctg
ctcctggacgaggccacttccgccctggataccgagagcgagaagaccgtgcaaggggcc
ctggacaaagccagagagggccggacgtgcatcgtcatcgcccatcgcctgtccaccatt
cagaactcggacatcattgccgtcatgtccaggggcttcgtgattgagaaaggatcgcat
gaccagctcatggcactgaagggagcctactacaagctggttaccacgggagcaccaatt
agctaa
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integrated database retrieval system
