Cyclopterus lumpus (lumpfish): 117740959
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Entry
117740959 CDS
T09199
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117740959 (sec16a)
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117740959 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
117740959
NCBI-ProteinID:
XP_034403531
Ensembl:
ENSCLMG00005019139
UniProt:
A0A8C3AHM4
LinkDB
All DBs
Position
12:6004845..6020378
Genome browser
AA seq
2410 aa
AA seq
DB search
MQPPPWTGPPGPSGPPPSGPNMFRRTRPHKHTAPATAAMPPAAQPMTDPFSFVRAPPPMA
AGAPLAAGGLPTIPNSNPPPMQAPSNTMYSQAGSGLPPQSQTPGDVQAPLSGPPPSSLPG
VTLFNPHSAASPGVYPAPSPVGYASSHSEQGYFNSTEHMPPMAAEPPPVAQAPGQTPFNQ
EVQGQPAPQHMLFQPVPPTTSYSQWAPDHSSRPPSVQNYFQPTSDPPPQPFNVPPQTQMY
PSHTPSTHHNNPTPPTQTGHPQIQAPLPPQNPVNAPSSQWPDPNAPQQHNSHFQTQNYFS
QTSDPRDSWFNIPPQDSGYHQMGTGLAHPQPRPYSVESQHASNTGAGPSSSFTPAQVPYS
QESGAISMFFKDNDVENEETLAGERNKAVNGIPESFQYQSNPQALSGQADVPLDYQGPPQ
QDHSYLPYMNDGDHAPQATTHKTHDSQHDHEENLECVLNQEVLPNDIHGSPAATAAHEVD
QFETGPNLETPDTIQRPIRSASVSSNYSNMSYGSGSGTRRQQGVVGTFIQQESPRLSDDA
NLSAATGGYFEQIDTSPAVDIGAQQSSLEQMWPPTPSPPKPTGIFQASANSSFEPVRSHG
VGVRPAEVDRAKMIVEGGADTTPGNLEQPPDNMENIYGSGHPPPAGAGAGGGVPHLPHPV
VHSLSRPSSRAFGGSRPCESPATTLWAQHDPASLGANILLAPAAPTVLAPLRQPSAYVIQ
PPEDVPLDLQPSQRIQPTSQQHSENLENPPKVSEAEPTDPQGNLGYASLLVSDSLDQPVL
IAPPVSNYSVIPPSTLAQAPSQSSLRESTPPVRMFTQGQGASTSQPPPMTSNHNPVFAPG
PISLNSSASNQGPLNLTRDNKEASTSDFTAPPQSQPVRPPLSRAQSLAVDGHTALHVNPQ
ASLVTAPVSNHNQPSNYELLDFSMHQSQAQNPTSGHPSALHESPQSSNGFYLQVTKDAQQ
GVRTQGNVPVQLPASSSTPQVPPAPSQAAANIQPPPAEPPQTSDPQAARHGQNYAPPVQG
SGAQPPLDQYPLPAQGPAPGSAPPSAAAYPPWPRGPVPPGASQPAPAEPPRPPSSAGSQQ
GYGPPPPGPAQVYGGYYGNYGEYPDGRPPYPPGQYPPPPGQYPPPPGQYPPPPGDPRAQQ
YYQEGPYRGRADPWYGRYEGQIPPTRDPNYQYREPQPERPNSRTSQYSDRPSSRQGYPED
YQRANQSAYNEYYAEYAKQCEYGGYNYGQYDPRYRAYYDPASWPNYDESYRGRDNYYNQQ
AYPARKEGYDDQWQYYPGYDASFDDDYRRRGEAYADDFDRRSVHSEQSAHSVHSSQSHHS
RRSSFSSRSQQSQVYQSQPDLVSAVYDTTASTLAVDYSYGQYPNQADATQNYSQYLYPSE
YTADSTWIAPEQPPPRPATPEKFSIPHRCARFGPGGHLVQVLPNLPSAGQPALVDIHNME
TILQDTPDQAELRAFPGPLVKEETHKVDVIKFSQNKVLECSRDNNLLDRDSARLLWEFIV
LLCRQNGTVVGTDIADLLLKEHRSVWLPGKSPNEANLIDFNNEPLARAEEEPGAGPLSLL
SDTFMTVPENLGKETERFRELLLFGRKKDALEAAMKGGLWGHALLLASKMDNRTHARVMT
RFANSLPINDPLQTVYQLMSGRMPASATCCGEEKWGDWRPHLAMVLSNLTHTLDLDTRTI
TTMGDTLVSKGLVDAAHFCYLMAQVGLGVFTKKSTKMVLIGSNHSLPFYQCATNEAIQRT
EAYEYAQSLGSQPCSLPNFQVFKLIYACRLAEAGLSAQAFHYCEVISRNVLMQPSYYSPV
FLSQIIQMSEKLRFFDPQLKEKPEQELFNEPEWLIHLRQLDGQIRTGVITYNEDRATPTQ
FDCSSPSSDLDQLSPPEPYGLPVEVDGPTPDNPLMTSLMPGPPPQGVQLMPPAPTSILQD
GMALPQPLPSSEVPHFYPVPPSGPPGQMSVSGYPPQNPGFAPPSFQPLPEQTEMYPGAHQ
QPCPPPLQVGQMSPHMHPPQVPHSPIQMNHPPPQMPHQMPHQMSHQMSQHMPQHMPPSPG
HMAPAEQMSHGPPEMHPAQPISSSPPRSSFTPQMDFYDHMAHMGPGRRSRTTSQSSMHMA
PGRRSRTTSESSTHSGGRERSNSAVMQASPLPPSIPEQPRIEEAKKVKKNSPKKGGGGGG
GGGGGWLNWLYRKGKNEAHLPDDKNKSIVWDEQKQKWVDSNEPEEENNKPLLPPPPGFPK
MPQMPGPGGPAAHPGGGPPVNMFSRRAGTRSRYVDVLNPSRISKPGGLAPAPADIFAPLA
PMSMPANLFVPSSAPDDQQPLEGSEGGNQEQNTIDATQMFSPTLLPPAPEGPPVPDGSQS
GELSRSSSMSSLSREVSQHLNQSHVQAQEMAPAGGVTFYNPAQFAQTSAPSGGGHRSGRL
GGQRQYPVVK
NT seq
7233 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctccttggactggacctccaggaccctcgggcccacctccttccgggccc
aatatgttccgcaggaccaggcctcacaagcatacggcaccagctactgccgcaatgcca
cctgctgcacaacccatgacggaccctttttcttttgtgagagctcctccccccatggct
gcaggtgcacctttggctgcaggtggtctcccaacaatacccaacagcaaccccccacca
atgcaagccccatctaacaccatgtactctcaggctggctcagggctgcctccacaatca
cagacaccgggggatgtccaagctcctctttctggtcccccaccctcctctctaccagga
gtgacactgttcaaccctcacagtgcagcatcccctggcgtttacccagcacctagtcct
gtaggatatgcatcctcacatagtgaacagggctattttaattctacagaacatatgcca
cccatggccgcagagccaccacctgtggcccaggcaccgggtcagacaccttttaaccag
gaagttcaaggacagcctgctcctcagcacatgttgttccagcctgtacctcccaccacc
tcctattctcagtgggcccctgatcacagtagtcgccctccatcagttcagaactatttt
cagcctactagtgaccctccgccacagcctttcaatgtacctccacagacccagatgtac
ccctcccacaccccatcgacccatcacaacaaccccacccctccaacacaaactggacat
ccccagattcaagctcctcttcctccccagaaccctgtaaatgctcccagttcccagtgg
cctgacccaaatgcaccccagcagcataattcccactttcaaactcagaactacttcagt
cagacctctgacccccgggactcatggttcaatatacctccacaggactcaggctaccac
caaatggggaccggcttagcccatcctcagccccggccttactcggttgaatctcaacat
gcatccaacactggggctgggcctagttcaagttttacccctgcccaggtcccatactct
caggagtctggtgcaatctcaatgttcttcaaagacaatgatgtggaaaatgaagaaaca
ctggctggagagagaaataaggcagtgaatggtatccctgaatcctttcagtatcagagc
aacccacaagccctcagtggccaagcagatgttcctttggattatcaaggacctcctcag
caagatcattcatacctaccatatatgaatgatggcgaccatgccccacaggcaactacc
cataagactcatgattcacagcacgaccacgaggagaatttggagtgtgtcctgaaccag
gaagtattacccaatgatatccatggcagccctgctgctactgcagcacatgaagttgac
cagtttgaaaccgggcctaacctggagactcccgatactattcaaagaccaattagatct
gctagtgtgtcatccaactatagcaatatgagctatggaagtggaagtggcactcgacgc
caacagggagtagtaggtacctttattcagcaggaaagcccacgtctcagtgatgatgct
aacctgtctgctgccactggaggctactttgagcagattgacacttctccagctgtagat
attggtgcgcaacagagttccctggagcagatgtggcctcccacacctagccccccaaaa
ccgactggtatctttcaggccagtgctaacagctcttttgaacctgtgcgctctcatgga
gttggggtgcgtcctgctgaagtggatagggctaaaatgatcgtggaagggggtgctgat
actacacctggcaacctggagcagccgccagataatatggaaaatatttatggctctgga
caccccccgcctgctggggctggggctggaggtggtgttcctcatctaccacacccagtg
gttcactctctctctcggccttcatcccgtgcttttgggggcagtcggccctgtgagagc
cctgccactactctgtgggctcagcatgatcctgccagcttgggcgctaacatcctccta
gcccctgctgccccaacagttcttgcacctttacggcagcccagtgcgtatgtcatccaa
cctccagaggatgtcccactggacctgcaaccctcccagagaatccagccaacttcgcag
caacactctgagaacctagagaacccaccaaaggtgagtgaggcagagccaactgaccct
caaggcaacctgggctatgcttctctccttgtgtccgactcgctcgaccagcctgttttg
attgccccgccagtgtcaaattacagtgtgattccccccagtacccttgctcaagcaccc
agtcaaagtagccttcgggaatcaaccccacctgtaagaatgttcacacagggacagggt
gcaagtacctcccaaccacctccaatgacctccaatcacaatccagtgtttgctcctgga
cctataagtttaaattcttctgcctcaaaccagggcccactcaatctgacccgagacaac
aaagaagcatcaacatcagacttcacagctccaccgcagtctcagccagtccgccctcct
ctctcaagggcccaatcattggctgtagacggccacactgctctccacgttaatccacag
gcttctcttgtgactgctcctgtctctaatcataatcagccatcaaattatgaactgctt
gatttttctatgcaccaatcacaagcccagaacccaacatctggccatccttccgctcta
cacgagtctccacaatcgagtaatggattttacctacaggtcaccaaagatgctcagcag
ggggtaagaacgcaagggaatgtccctgtccagttgccggcctcttcatctactccacag
gtaccaccagcaccctcccaagcagctgcaaacatccagccgccaccagctgaaccccct
cagacatcagacccgcaagctgcacggcacggacaaaattatgctcctcctgttcaaggg
agtggagcacaacctccccttgaccagtatccacttccagcacaggggcctgccccgggc
agtgctcccccatccgctgctgcataccccccatggcctcgaggaccagtacctccagga
gcttctcagccagctcctgcagaaccacctcgaccaccctcctctgcaggcagccagcaa
ggctatgggccccctcctccagggccagcgcaggtgtatggtggctattatggtaattat
ggagaatacccagatggcagaccaccatatccccctggccaataccctcctccacctggc
caatacccacctccacctggccaatacccacctccacctggggatcctagagcacagcaa
tattatcaagagggtccatacaggggcagagcagatccttggtatggcagatatgaaggg
cagatcccaccgactcgcgatccaaactaccagtacagagagcctcagccagaacgaccc
aactccagaactagtcagtactctgacaggccctcctccaggcaaggctatcctgaggat
taccagagagccaaccaaagtgcctacaatgaatattatgcagaatacgccaaacaatgc
gaatatggaggatacaactatggacagtatgacccccggtacagagcatactatgatccc
gcctcctggcctaattatgatgaaagctacagaggcagagacaattactataatcaacag
gcatatcctgccaggaaagagggctatgatgatcagtggcagtactatcccggttatgat
gccagtttcgatgatgattaccgccgacgcggagaagcgtacgccgatgactttgaccga
cgcagtgtccacagcgagcagtcggcacatagtgtgcacagctctcaaagccaccacagc
agacggagcagcttcagctcccgatcacaacagagccaggtgtatcaaagccagcctgac
ttagtgtcagcagtctatgacaccacagcatccaccctggctgtggattactcctatgga
cagtacccaaaccaggctgatgccacccagaactacagccagtacctctatccctcggag
tacacggcagacagcacctggatcgcccctgagcaacctcctccacgtcctgccacccca
gagaagttcagcataccccaccgctgtgcccgctttggacctggtggtcatctggtccaa
gttctgcccaacctcccctcagctggacagcctgctctcgttgatatccacaatatggag
acgatactgcaagacaccccggatcaggcagaactacgtgcattcccaggacctcttgtt
aaggaggagacccataaggtggacgtgataaagttctcccagaacaaagtgctggagtgc
tctcgtgacaacaacctcttggacagggactctgcccgcctgctctgggaattcattgtg
ctgctctgtagacagaacgggactgtggtcggcacagacatcgcagacctcttgctgaag
gagcatcgctctgtctggctaccgggcaaaagtccaaatgaagccaacttgattgatttt
aacaatgagccgttggcacgagccgaggaagagccgggagctggaccgctatccctcctg
tccgacaccttcatgactgtcccagagaacctcggaaaggaaaccgaacgcttcagggag
ctcctactgtttggccgcaagaaggatgcgctagaagcagctatgaagggaggtctctgg
ggccacgccctgctgttggccagtaagatggacaacagaacacatgcacgtgtcatgaca
aggtttgccaacagtttgcctatcaatgaccctcttcagacggtgtaccagctgatgtca
gggaggatgcctgcatcagccacttgctgcggagaggagaagtggggtgactggcgccct
cacttggccatggtgctgtctaacctcacacacaccctggacctggacactcgcacaatc
accactatgggggacactctcgtatccaaggggcttgttgatgctgcacacttctgctac
ttgatggcccaagttggtctgggagttttcacgaagaagagcaccaagatggttctgatt
ggctccaaccacagtttgcccttttaccaatgtgcgaccaacgaagctatccagaggact
gaggcctatgagtacgctcagtctcttggctcccagccatgctcactacccaatttccag
gtcttcaagttgatctatgcatgccgcttggctgaagcaggcctgagtgctcaggccttc
cactactgtgaagttatttctaggaatgtcctcatgcagccttcctattactctccggtt
ttcctaagccaaattatacagatgtcggaaaagctgcgattctttgatccacaactgaag
gagaagcccgagcaggagttgttcaatgagcctgaatggctgatccacctcagacagctg
gatggacagatacggacgggagtgattacatacaatgaagacagagcaactcctacacag
tttgactgcagcagccccagctctgacttggaccagctgagtccacctgaaccgtacggt
ttgcctgtggaggtggatggccccacccctgacaacccactaatgacctcgttaatgccc
gggcctcccccgcagggagttcagctgatgcctccagctcccacctctatcctccaagac
gggatggcacttcctcagcctttaccctccagtgaagtgccccatttctacccagtaccc
cccagtggaccaccaggccagatgtccgtctcaggctaccctccacagaatcctggcttt
gcccctccttccttccaaccactaccggagcagacggagatgtacccgggagcccatcag
cagccgtgtcccccacctcttcaagtgggccaaatgtcaccacacatgcatccccctcag
gtgccgcattcaccaatacagatgaaccacccgccaccccagatgccccatcagatgccc
catcagatgtcccatcagatgtcccagcacatgccccagcacatgcccccttctcccggg
cacatggcccctgcagagcagatgtcccacggcccaccagagatgcatcctgctcagcca
atatcatcctccccacccagaagctccttcacaccacaaatggacttctatgaccacatg
gctcacatgggtcctgggaggagatcacggactacttcacaatcttcaatgcatatggct
ccaggacgccgctctcgcaccacctctgaatcatccactcactctggtggaagagagcgg
agcaactctgctgtcatgcaggcctctccactgccaccttcgatccctgaacagccccgc
atagaagaggccaagaaagtcaagaaaaactccccgaaaaagggtggtggtggaggtgga
ggtggaggtggtggttggctaaactggctctataggaaggggaagaatgaggctcacttg
ccagatgacaaaaacaaatctattgtgtgggatgaacagaagcagaaatgggtcgactcg
aacgagcctgaggaagagaataataagccccttctaccgcctcctcctggctttcccaag
atgcctcagatgcctggcccaggagggcctgccgcacatccgggtggtggtcctcctgtc
aacatgttctccaggagagcaggcacgaggagcagatatgtggacgttctgaaccccagt
aggatttctaaaccgggcgggttagccccggcgcctgcagacatcttcgctcctttggcg
ccaatgtccatgcccgctaacctatttgtgcctagttcagctcctgatgatcaacaacct
ctagagggaagcgaaggaggaaatcaggagcagaacaccatcgatgctacacagatgttc
agcccaacgttgttaccacccgccccagaaggtcctcctgtgcctgacggctcacagtcc
ggggagctctcacgttctagctcaatgagttctttatcacgcgaagtgagtcagcattta
aaccagagtcatgtccaagcccaggaaatggcacccgctgggggcgtcaccttttataac
cctgcacagtttgcacagacaagtgcaccttcgggaggcggacaccgctctggccgtttg
ggcggtcagcgccagtacccagtggtgaaataa
DBGET
integrated database retrieval system
