Cyclopterus lumpus (lumpfish): 117741080
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Entry
117741080 CDS
T09199
Symbol
taf15
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 2N
KO
K13098
RNA-binding protein FUS
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117741080 (taf15)
09122 Translation
03015 mRNA surveillance pathway
117741080 (taf15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117741080 (taf15)
Spliceosome [BR:
clum03041
]
Complex A
Other components
Complex A specific factors
117741080 (taf15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
117741080
NCBI-ProteinID:
XP_034403669
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All DBs
Position
13:722851..731987
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AA seq
438 aa
AA seq
DB search
MATDSGYGGSQSYGAYAGQQSGQGYGQGNGSGGSYGGQSYSGYGQPGAATQEGYSQPPPP
SFDNYGQASSGYGDKSAPSQXGQQGSYPIQDQGGDSYGLPSSFSGQGPRGGGGGGGAASY
GRWSEGEEAGQGGRFGRDQGDRSEGGGLRGRGRGGAAIERGSTDRSGGFDRSGGYDRGGX
EPPGMGGGDRGGYKNYGGSRDFDSRDETAGDQDNSDNNTIFVQGLGEEATVQEVGDFFKQ
IGIIKMNKKTGLLMINIYSDKATGQPKGECTVSFDDPPSAKAAIDWFDGKEFKGKPIKVS
FATRRAEFTQRGGASGGGARGGGRGGFRGRGSGGGGGGPNFDIKGGDWPCPNSSCGNMNF
ARRQECNKCGTPKPGDGGGGDRGGRGGYGGDRGGGGFRGRGGFRGGDRGGYGGGGGFGGG
YKMGGRGDRRDDRRERPY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccactgattcaggctacggtggctcacaaagctacggggcatatgccggtcagcag
agtggacagggttatggacaaggaaatggcagcggtggctcttatgggggacagagttac
agtggttacggacagccaggcgcagcaacacaagagggttatagccagcctccgccgccg
agctttgataattacggacaggcatcatctgggtatggcgacaagtcggcgccttctcaa
nngggacagcaaggttcctatcctatccaggaccaaggaggtgacagctatggactgcca
agctcttttagtggccaggggccacgagggggtggtggtggtggtggcgccgccagctat
ggaagatggagtgaaggtgaggaagctggtcagggtgggaggttcggacgtgaccaagga
gatcgttctgaaggaggaggcttaagaggccgaggtcgtggtggtgcggctattgaacgt
ggtagcacagaccgcagtggtggattcgaccgcagtggtggatacgaccgtggcgganng
gaacctcctggtatgggtggtggtgaccgtggtggctacaaaaattacggtggctctcga
gacttcgactcaagggatgaaacggctggtgatcaggacaactctgacaacaacaccatt
tttgttcagggactaggagaagaggccacagttcaggaagtcggcgacttctttaagcaa
attggtatcatcaagatgaacaagaaaactggactgctaatgatcaacatctactctgac
aaggccaccggtcagccaaaaggagaatgtacagtgtcgtttgatgacccgccctctgcc
aaagctgctattgactggtttgatggcaaggagtttaaaggcaaacctatcaaagtatca
tttgccacccgcagagctgagtttacacagagaggaggagcaagtggtggaggtgcaaga
ggggggggacgaggaggtttcagaggacgtggtagtggcggtggaggaggaggaccaaac
tttgacattaagggaggtgactggccctgtcccaacagctcttgtggcaacatgaatttt
gcacggcggcaagagtgtaacaagtgtggcactccaaaaccaggagatggaggtggtgga
gatcgtggaggaagaggtggttatggcggtgacagaggtggcggtggcttcaggggtcgt
ggaggtttccgtggcggagaccgtggaggttacggaggaggaggaggattcggaggaggt
tataaaatgggaggaagaggtgaccgtagagacgacagaagagaacggccatactag
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