Cyclopterus lumpus (lumpfish): 117741152
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Entry
117741152 CDS
T09199
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117741152 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117741152 (trip12)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117741152 (trip12)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117741152 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
117741152
NCBI-ProteinID:
XP_034403848
Ensembl:
ENSCLMG00005008254
LinkDB
All DBs
Position
13:complement(458526..469524)
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AA seq
1280 aa
AA seq
DB search
MPCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPGTGSHQEVRREDARAQLMKED
PELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHI
ASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESESFLVTSPPKA
CPSGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNSNSEPSRT
AGVSGLARAPPKDSMSNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTAT
EQLNLQVDGGLECLVEISTIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRDLLSRDVRLK
RFLHVFASCPVHGMESVGRLDPTENGPYLAMVHKMNSCLSQMEQFPVKVHDFPSGNGNGS
RGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIRE
EDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEE
ERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGTKDAVGGKRGRAQTAPTKTSPRNAK
KQDELWHDGVCPSVVNPLETYLTSEPPETITFDDPSLEVNLLLRVLHSISRYWFYLFDNA
VCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFY
VTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSS
RAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLPNPKGSQEGTKYMFS
SKGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEVS
ISSHDLVNIDPAVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLSL
DFTLPGYPNIELKKGGKDFPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLH
HLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFEAEQQR
LFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIE
IMREKLLIAAREGQQSFHLS
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgccctgcctgcctagagagggcatctttgcagttgatgtaatgctgaagaagggcagt
gcccagacgacagagggagcgatctggcagtggagggatgatcgtggactttggcatcct
tacaaccgcattgacagccgcattattgagacagcacaccagaacggggaggatgagatc
agcttgtcaaccctgggccgtgtgtacacaattgactttaactctatgcagcagattaat
gaagacacaggaacagcacgtggtatccagaggaaacccaatcctcttgccaaccctggt
acagggagtcaccaggaggttcgtcgagaggatgcacgagcacagttgatgaaggaggac
ccagagctggcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagt
tcatcggctggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctac
tttgctgatgcagagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacatt
gcctccatgctgtccagccaggacctgaagattgtagtgggttctcttcagatggctgag
atcctcatgcagaagctgcctgatgtcttcagtgtctatttcagaagagaaggtgtgatg
caccaggtgaagaacttgtcagaatctgagagctttttagtcactagtcccccaaaggct
tgccctagtggtactgctagtttgtgcacgaccaccatcagcactgcatccaccacatcg
gctaataatgcaactcctgatctgggctcacccagcttccagcacagcatggacgactca
ctggacctcagcccacaggggcggttaagtgatgtcctaaagagaaaacggcttcctaaa
agagggccaaggaggcccaaatactctcccccaagagatgatgataaagtagacaatcag
gccaagagccctaccagtactcagtcaccaaaatcatccttcttggccagtcttaatccc
aagacgtggggcaagctgggtgcccagaccaacaattccaactctgagccctcacgcaca
gcgggagtgagtggcctggcaagggcacctcccaaggactcgatgtcaaataacagagac
aaaataaaagcctggatcaaagaacaggcaagtaagtttgtggagcgctacttcaactct
gaaaatgtggatggcagcaaccctgcactgaatgtactccagagactttgcacagccacc
gagcagctcaacctgcaggttgacggtggtttggagtgcctggtggagatctccactatt
gtatcagaatctgatgtgtcgtcttttgagatccagcacagtgggctggtgaagcagctc
ctggtctacctgacctccaacaccgacagggacttgcttagccgtgacgtgcggctcaag
aggttcctccatgtgtttgctagctgtccggttcatgggatggagtctgttggtcgtctg
gacccaacagagaatggcccatacctggcaatggtgcacaaaatgaacagctgcctgagc
caaatggagcagttccctgtcaaagtgcatgatttccccagtggcaacggcaatggcagc
aggggctctcaggcactgaagttcttcaacacacatcagctcaagtgtcagctgcagaga
cacccagattgcactaacgtcaaacagtggaaaggcggccctgtgaagatagaccccctg
gccctggtgcaagccattgagcgatatcttgttgtcagaggttacggccgaatcagagaa
gaggatgaagacagcgatgacgatggttcagatgatgaaatcgatgaatcgctggcggca
cagttcctgaactctgggagtgtgcgtcacagactacaattctacatcggtgaccacctg
ttaccctacaacatgactgtataccaggctgtgcggcagtacagtcttcaagcagaggaa
gaaagggagtcgacggatgatgaggcgaacccacttgggcgagctggcatctggaccaaa
acgcacacaatatggtataagcctgtgagagaggatgaggatggcactaaagacgctgtg
ggtggaaagaggggtcgagcccagactgctcccaccaaaacctcccctcgcaacgccaag
aagcaggacgagctgtggcatgatggtgtgtgtcccagtgtcgtcaatcccttagagaca
tacctcacttcagagcctccagagaccatcacctttgatgacccctctttggaggtcaac
ctgctgctgagggtcctgcactccatcagtagatactggttctacttgtttgacaatgct
gtgtgtaaggaaatcatccctaccagtgagttcattaacagtaagctgacagccaaagca
aaccgtcagctccaagacccactggtcatcatgacggggaacatccccacttggcttatt
gagcttggaaagacctgtccgttcttcttcccctttgacacccggcagatgttattctat
gtaactgcctttgatcgcgacagagccatgcagcgcttgctggacacaaaccctgagatc
aaccaatcagattcccaggacagcagagttgcaccacgtcttgacaggaagaagaggacg
ataaaccgcgacgagctgctaaaacaggccgagtctgtgatgcaggacctcggcagctcc
agggcaatgttggagattcagtacgagaacgaggtcggcacaggacttggccccactctg
gagttctacgctctggtgtctcaggagctccagcgggctgatctcggcctgtggaggggc
gaagaggtcacactgcccaatcctaaaggaagccaagagggaactaagtacatgttcagc
tccaaagggctgtttgctgttcccttcggaaggacaaccaagccagcacacatagccaaa
atcaaaatgaagttccgtttcttaggaaagctcatggccaaagccattatggacttcaga
ttgttggacctgcccctggggctgccattttataagtggatgctacggcacgaggtgtcc
ataagctcccacgacctggtgaacattgaccccgctgtggcgaagtccatccagcacttg
gaggatattattcgccagaagaagaggttggaacaggaccgatcacagacaagggagacc
ctacagcaggccctggagagcctgaacatgaacggctgctcagtggaggacctgagtttg
gacttcacccttccaggataccccaacattgagctgaaaaagggcggcaaagactttcca
gtcacaatctacaacctggaggagtacctgaggctggtggtgtactggactctaaatgaa
ggagtgtccagacaatttgagtcatttagagaagggtttgaatcagtcttcccattgcat
cacctgcaatatttctatccagaggagctcgaccagttgctgtgtggcagtaaatcagag
acgtgggacgtcaagacgttgatggagtgctgtcgaccggaccacggctacacacatgac
agccgtgccgtgcggttcctgtttgaggtgctgagcagctttgaggccgagcagcagaga
ctcttcctgcagtttgtcacaggaagccccagactgcccgttggtggtttccggagcctg
aatccccctctgacaattgtgaggaagacgttcgagtcaacagagaacccggatgacttc
ctcccctcagtcatgacctgtgtcaactacctgaagctgcctgactactccagcatcgag
ataatgcgagagaaactgttgattgcagcccgcgagggtcagcagtctttccacctttcc
tga
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integrated database retrieval system
