Cyclopterus lumpus (lumpfish): 117741160
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Entry
117741160 CDS
T09199
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117741160
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117741160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
117741160
NCBI-ProteinID:
XP_034403861
Ensembl:
ENSCLMG00005003188
UniProt:
A0A8C2YY99
LinkDB
All DBs
Position
13:6643955..6664536
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AA seq
2121 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKTINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLNEEHISLAQQNSSPLQVILSPYGLNGSLTGQAFKMSDHPTQKLIEEWRQFY
PISPNPKQVQEDKMEDSDWEDDSMAAVEVLVAGVRMVYPSCLVLLPLSDLPAVVPQGSVN
TSGSLCGAPQGQASHRDPAMSSVTLTPPTSPEEAQTDYQPSQRWLKLSSASDGYSSNNTL
HGGKIPRRLASQMVESVWQEYNINRTGNKRKFTTLTNGTCEEESDNTGLWDFVECTHRPH
CNCSRHKNQKQRSSSTSGHPPSSGQPTQLALKHKLGEKLEKGEKQQKRPQMPFHHRNYVS
EEQSMEPQTQRLCLRSQEEGSYPSLHHVDTVSSKAPTLHTHGPPADLVGSPPPPPLSPHP
CDHVEGDMTPSEMKNSSTPIHQQFYPPSVEPCLLPQKGTSEEPQLENMPMPLPFPPAYSE
TLEPTVFVGSAINPNEDCTHNPWKYFNLPRKKASNFLTPQLPVDKIRDDSGRSGGTESVV
SVTELMSGSTHTLKVSQELIKTYAQRRNSHLASATGDREYSDEPDPYAFEEGDDEFSFTD
KKDKPGAEREGNKKHMVDEDTGTADDGQGQPGSKPSASTSLIHENDLAVSYSDLDKIFNS
DEDELVPGSKRAGVGTEDKFGCKDNKAASTDPLSCINSADLQQMFPTPPSLEQQGYSPMN
SGSKDSLETGTGLTLLDGSQYNNHFKMEVEEGFCSPRPSEIKDFSFVYKPETCQLLIGCS
MYAPLKMLPSQCLLPVKLPEDCVYTPSWTLGKMELIPPVTNVNLLTKDSNVPSVEPDYSQ
TYTPQTHTPFISSSAPPSNSGTGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYD
NSDLYSPASTASTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCV
CNMNIRGADVGVYLKDNGEAQYPCTCGFSAVANRRFGQSAGLFLEDELDVVVRGSDASRD
TERCFEELRSSTTHKAGSLTEKPPDELILLLQDQCTNPFAPMAGVEYPKQGSVPSSFLRV
EERDCYNDCYMALEHGRQFMDNMSGGKVDETLVKSTCLHQWPKCKSADMSKLFSQDVLRV
LLSLQPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYE
YDFVVLSPFGLPYWEKLLLDPFGSQRDVGYVVICPENEALLRGAKTFFKDLSAMYEACQL
GQHRPICKSHPEGVLKVGTTEGRSMTEQPLSDWFLKMAAKDGNNEAFNKLKLFAQVCRYD
LAPYLSEQSLDSSLLSQRSPVVASSSSQTSSSSSTSSGPQSTNTTSSSTSSAPPAQINST
PPSSTSGSQTVGGMASAKPSSYSPFGTAGLQGSTSQNGPQSNTPGAGGLAENGPSANQPQ
VPTEAPESTMERDKVGKPTDGESHAVSYPPAIVVYIVDPFSYEDADREVHSSAYTLGLLR
CYMEMLQFLPSRIRNAVSVQIVPCQYLLQPVHSGERHLYGQHLKSLAFSVFTQCRRPLPN
STNFKALTGFGPGLAIDMALRNPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYN
VLFVGYCLSHDQRWLLASCTDQHGELLETCIISIDVPNRARRKKGSARRVGLQKLWEWCL
GLVQVTSLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRLCGISAADTPS
ILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAM
VQVNTNTSEPIDINFNPINPDGSDGMGIFDLFDNDMVDPDLINILPNSPTTSPVHSPGSH
FHQGGDGGKGQSADRMESHEEALNILQQPMALGYFVSTAKAGPLPDWFWSACPQAQNQCP
LFLKASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRR
SCLPVHFVVLTQMYNFIKNML
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggactgccactccaatctcttc
tgcctggccgatttgactggaataaaatggcggcgttttgtgtggcaaggacccacctct
tcgccaatccttttccctgtgaccgaggaggaccctatcttgtgtagcttcagccgatgc
ctagcagcagatgtgctgagtgtgtggagaagacaccacactccgggtcgcagagagctc
tggcttttctggtggggggatgaccccagttttgcagagctaatccataatgagctctct
agtgaggaggatggggagtgggagagtggcctgtcctacgagtgtcgaacgctcctgttc
aaagccatccacaacttgttggagcggtgtctcatgaaccgcggctttgttcgcatcggc
aagtggtttgttaagccataccagaaggaggagaagaccattaataaaagcgagcacctg
tcttgtgcattcaccttcttcgtacacggtgacagcaatgtgtgcacaagtgtggagatc
gctcaacatcagcctcttcagcgactgaatgaggaacatatcagcctcgcccagcagaac
tccagccctttgcaagtcatcctgagtccgtacggcttgaatgggagcctcaccggtcag
gcttttaagatgtcagaccaccctactcagaagctcatagaagagtggaggcagttctac
cccatcagtcccaatcccaagcaggtccaggaagacaaaatggaggattcggactgggag
gatgactccatggcagctgtggaggtccttgttgcgggagtacggatggtttacccttcc
tgtctggtacttctccccctgtcggatctccctgctgtggtcccgcagggctcagtcaac
acctcaggaagcctgtgtggtgctccgcaaggccaggcttctcacagagatcctgccatg
tcctccgtcactctgactcctccaacgtcaccagaggaggctcagactgattatcagcct
tcccagaggtggctcaagctgtcttctgcatcggatggctacagctctaacaacactctt
catgggggtaaaatccctcgcaggctggccagccagatggttgagtctgtgtggcaggag
tataacattaaccgtacaggcaacaagaggaagtttactaccttgaccaatgggacctgt
gaggaggagtcagacaacactggactttgggattttgtggagtgtacccacaggccacat
tgcaactgctcaagacataagaatcagaaacagcggtccagcagcacctcaggacatccg
ccttcatcaggccagcctacccagctggccctgaaacacaagctgggcgagaagcttgaa
aagggggagaagcagcagaagaggccgcagatgccttttcaccaccgcaactatgtgagc
gaggagcagtctatggagccacagacccagaggctttgtttaagatcacaggaggagggc
tcatatcccagcctgcaccacgtggacacagtttcctccaaagcccctacgctgcacacg
cacggcccccctgcagaccttgtcggatcgccgcctccccctccactcagtccacatccc
tgcgatcacgtagaaggggacatgactccaagtgagatgaagaattcatccacgcccatt
caccaacagttctacccgccttcagtggagccctgtctgctgccacagaagggcacatct
gaggaacctcagctggagaacatgcctatgcctctgcccttccccccagcctacagtgaa
accttagaacccaccgtctttgtgggttccgccatcaaccccaatgaagattgcacccac
aacccttggaagtatttcaacctgcccaggaagaaggcatccaacttcctgactccccag
ctacctgtggataaaatacgagatgattcaggcagaagcggaggaacagaaagtgttgtg
tctgtcactgagttgatgtcgggctccacgcataccctaaaggtgtcccaggagctgatc
aagacctacgcccagcgaagaaacagccatcttgcctctgccacaggagacagagaatac
agtgatgagccagacccttacgcatttgaagagggagatgatgagttcagcttcacggac
aaaaaggacaagcctggagctgagcgagagggcaacaagaaacacatggtggatgaagat
actggaacagcagatgatggtcagggccaaccgggcagtaaaccttcagcctccaccagc
ctcatccacgagaacgacttggctgtgtcctacagtgacctggataaaatcttcaattcg
gatgaagatgagctagtgcctggatccaaaagagctggtgttggaaccgaggacaagttt
ggctgtaaagacaataaagcggcctcgacggaccccctgtcttgcataaactcggcagac
ctgcaacagatgtttcctaccccgccctccctggagcaacagggttattctcccatgaac
tccgggagtaaggatagcctggaaacagggacgggcctcacccttctggatggcagccag
tataacaaccacttcaagatggaggtggaggagggattctgcagcccgaggccatccgaa
ataaaggacttctcttttgtttacaagccggagacatgtcagttgttaattggctgttca
atgtacgcacccctgaagatgctacccagccagtgtctgttgccggtcaaactgccagaa
gactgtgtgtacacgcccagctggaccctgggcaaaatggaactaatacccccagtgacg
aatgtcaatctcctcaccaaagacagtaacgtccccagtgtggagccggactacagccag
acctacacccctcagacccacacacccttcatttccagcagtgcccctccaagcaacagc
ggcacaggcatcctgccctccccggccacgccaaggttctccgtgcccacaccgcgcaca
ccacgcactccacggactccccgcggcccgtcaagcgtccagggttcactcaagtatgac
aactctgatctttactcccctgcctccactgcctccacttgccgacctctcagctccgtt
gagccagccacagtaccttctatccccgaggctcacagtctctacgtcacccttattctc
tccgagtccgtgatgaacctcttcaaggactgcaactttgacagttgctgcgtatgcgtc
tgcaacatgaacatcagaggagcagatgtaggcgtgtacctcaaggacaatggtgaggct
cagtacccctgcacttgtggcttcagcgccgtcgccaatcggcgttttggccaatcggcc
gggctgtttctggaggacgagctggacgttgtggtgcgaggctcagacgctagtcgggac
actgagcggtgtttcgaagagctgcgatcttccacaacgcacaaggctggcagcctgaca
gagaaacctccggatgagctaattttgctgctgcaggaccagtgcaccaatccgtttgct
ccaatggccggcgtggagtaccctaagcaaggctcagtccccagttcatttctgagggtg
gaagagagagactgttataatgactgctacatggctctggagcacggcaggcaattcatg
gacaatatgtcaggaggcaaagtagatgaaacactagtgaaaagcacctgtcttcatcag
tggccaaaatgcaaatcggcagacatgagcaagctattctctcaggacgtcctgcgggtg
ttgttgtccctccagcctgtgctgcaggacaccattcagaagaaaaggagtgtgcgctct
tggggcgttcagggaccgctcacttggcaacagttccacaagatggctgggaggggatca
tatggtacagacgagtctcctgagcctcttcccatccccacttttttggttggttatgag
tatgattttgtggtgctctctccttttgggttgccctattgggagaaactccttctggat
ccttttggttcccaaagagacgtcggatatgttgtcatctgcccagaaaatgaagctctg
ctccgcggagcaaagacattcttcaaagatcttagtgctatgtatgaggcatgccagctt
gggcaacacaggcccatctgcaagagtcacccagagggcgtattgaaggtcggcaccaca
gaaggcaggagcatgacagagcagccccttagtgactggttccttaagatggctgccaaa
gacggaaacaatgaagcctttaataagctcaaactctttgctcaagtgtgccgctatgat
ctagctccgtacctgtcagagcagtctttggatagctccctattgtcccagcgcagcccc
gttgtggcctcttcctcctcccagacctccagctcttccagcacctcctcaggaccccag
agcaccaacactaccagctccagcaccagctctgccccgcctgcccagatcaacagcacc
cctccctcttccacctcaggctcccagactgtcgggggaatggcttcagccaaaccaagc
tcttactcgccgtttgggacagcaggcttgcagggcagcacgtctcagaatggaccccag
tcaaacacaccaggtgccgggggactggcagaaaatggaccctctgccaaccagcctcaa
gtgcccactgaggcgccagagagcacaatggagagagacaaagtggggaagccaacagac
ggagaatcccacgctgtgtcttacccgcctgccatcgtggtgtacatcgtcgaccccttc
agctacgaagacgccgacagagaggtccactccagcgcctacacgctgggcctactgcgc
tgctacatggagatgctccagttcctgccatctcgcatcagaaacgctgtctccgtacag
attgttccctgccagtatctgctgcagcccgtgcacagcggggagcgccatctctacggc
cagcacctcaagtcgctggccttctcagtgttcactcagtgtcgtcggcctctgcccaac
tccaccaacttcaaggcgctgacaggttttggtcccggtcttgccatcgatatggcactc
aggaacccagagagacccgagtgtctgcgtctgtatacgccacctttcattttggctcct
gttaaagacaagcagactgagttaggggagacgtttggcgaggcatcccagaagtacaac
gtcctgtttgttggctactgtctgtcccatgaccagcgctggttgctggcctcctgcact
gaccaacatggagaactgctggaaacctgcattattagtattgatgtacccaacagggct
cgcaggaaaaagggctcagccaggcgagtgggtttgcagaagctgtgggagtggtgcctt
ggcctggtacaggtgacatcgctgccatggagggtggtcattggccggctcggtagaatg
ggccacggcgagctgagagactggagtattcttctgagcagaaggaacttgcagtctctc
agtaaacgtctgaaggagacatgtaggttgtgtggcatctctgcagctgacactcccagc
atccttagcgcctgtctggttgccatggagccccagggttcctttgtcatcatgccagat
tcagtctcgacaggttcagtgttcggtcgcagcaccactctcaacatgcagacgtcgcag
ctgagcactcctcaggacacatcctgcacacacattctggtgttccccacctcagccatg
gtgcaggttaacaccaacacttcagaacccatagacatcaacttcaatcctataaatcca
gatggatctgatggaatgggcatctttgacctgtttgacaacgatatggtggatccagac
ctcataaacatcttgcccaactcccccacaacctcgcctgttcactcgccgggctcccac
ttccaccaggggggggatggaggcaagggacagagtgccgatcgtatggagtcccatgag
gaggctctgaacatcctgcagcagccgatggctctgggctactttgtctcaacagccaag
gctggaccactgcctgactggttctggtcagcctgtcctcaagcccagaaccagtgccca
ctcttcctcaaggcctctctacacctgcacgtgtcttctgtccaatcagacgagctcttg
cacagtaaacactcccaccccctggactccaatcacacttctgatgtgctcagatttgtt
ctcgagcaatacaacgccctctcctggctgacgtgcgaccctgcaacccaggaccgacgc
tcctgtctgcctgttcactttgtggtgctcacccagatgtacaacttcatcaagaacatg
ctctga
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integrated database retrieval system
