Cyclopterus lumpus (lumpfish): 117741221
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Entry
117741221 CDS
T09199
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117741221 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117741221 (bicra)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
117741221 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
117741221
NCBI-ProteinID:
XP_034403983
LinkDB
All DBs
Position
13:complement(12200308..12212806)
Genome browser
AA seq
1850 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHGHVPEVQPAVQLSANEPAGLPRVSVDLDFLE
DDDILGGSPGGEGGSNGIGTNHEPCDILQQSLAEANITEQSLQEAEAELDLGSFGIPGLT
QVVQTLPDASLSGAGGTAVGVGVGVGGAAAIFPGSAPSTTATPHNATADMLGSVLAQQGL
QLQPQVMNKTISVQPFMQPMGLGNVTLQPISSLQTLPNGSQSGHLGIGQIQVVGQPTVMT
INQSGQPILAKAMGGYQLHQSGPEVSGAGSQAGIGGSGGGLLIQGNKATLGSPALNGPAV
CVSSTNSSSGGTMTAPAGLLGFGSTTLSSGMGPQVQTQGQIMQNVIIQRTPTPIQPKPPQ
GGAIQPKLFKQQQQHPQPAPQPLQNDAHKALGLQQIPVSAAQNVAFLTGKPGSNVVLSTQ
ATTQGQQFQQTIFKQQAAQPSGKPLSVHLLNQQGSIVIPSQTVLQGQNHQFLLPQLQAGG
QILTQHPGGHIITSQGPGGQLIANQILTANQNINLGQMLTSQGHPGAAHILSGSIQLQPG
QMGTPTLFQMPVSLAQSQSQTQTHTVSGHAQTVIQGMPIQNSLTMLSQVEGLSPAVSLQP
ALQPQLGGVPSSSSSSTGAATMAQGQPGECVTVLGSSTDQAAHPTQQHAAQSSILAMQPG
SSVSTITTVPSSSPSMSVSTSSSVTAVGLVPHQAQHSPGRLLFTNQGSSMILSQESLQMF
LQQEQHHQSENESTPSVGVPASVIVSSNSVTAPVPAVHDSQLTDSWVGQCHSPPPGPSHM
TAVVKQVPSGHQQSLKIQGMSPALSAHATLPLVADSPQPFQSPLTLTQQIQSPHHQQHPR
PPSQPQPQSQTPSRSCTPSNHPQLFIVHNQMAESPQTAQQGQPQQTHIQVQLQPQPRPAS
QPATYQQDMPPMSQSPKPPPTPPAQHQFTVIPISTSATAAVKAQVPIQGLTAEQQHHLQL
IGAQLQTLSTITQPSLQQKQLLEKLHQVQHNILLQAKQSTQPQVTSQFSSQQDVPVDKVV
IAPSANTGPPAQLLSVLQPTPMLVKTPVTASSDLQVFSGAQGPAGAMLNQTVIPASLTQP
VQVQPKPGVISSVGGITLGKGMQIQVLGASLTQMPAPQPPVPVQTQTTTMKMPFSAEPSK
EARMLEQLRKQQGSVLHPNYSAPFHSVEDTLHRLLPYHLYQGTANSSQDYQRVDDEFETV
SSHLLKRTQAMLDKYRYLLFAESKVFKPEQRLGPSAEMVMIDRMFIQEEKIALSQDRILA
KERPEEFVANARMLGSGVSSQHTSSSEATSFSGGVPAAVPAPPPAAPAPAPLPNIAPNPP
SAPAPALVPAPAPAPPSTNPFPPTKLVIKQGGGGASVSWSSSCPPAAASRLAEPTSQSSS
FSRAPTASSSSSSSFNSTAADDDDALPQRTSKPPMKTYEARRRIGLKLKIKQDQTGFSKV
VHNTALDPVHTPQPQQSSQSIPQPKTQPQFETAVPHPKSQPLSTPPSTVIRTQSPVCTAS
SASSVTTTTTQCNPPLRGNVAPNAAPSSSTSSSRTWSLSTSSSTQMNGTLDHSNVGRVKH
NSASTATPSQTTCRLPLRKTYRENISPRVRPGVPGGGDESLSYPRPTPSPPRQEASPSPP
SERTVIASVKVEKRGREASHTHAESSHETCRLGSAMQGLDEMDEVFNRGIKTAQHHHHVP
QLLDREGAKERGEEHTDLETDVSKYKRVSGKNRHRAGGTFRMDPGPPSPESSFTRDSLLP
AKRCKSDSPDMDNASFSSGSPPDDSLNEHLQCAIDSILNLQQEPSARGHHIKGGNSRSHQ
SQRPGGSAASSHRPSVPSSSSASSSSSLAQHPQVGGRGHNGSLVPQTQSR
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggcaggtgccttctagatgtaatttgtgacccagaagctctcaat
gactttcttcatggatctgagacccatggccatgttccagaggtccagcctgcagtccag
ttgtcggccaatgagccagcaggcctacccagagtcagtgttgacctggacttcctggag
gatgatgacatcttgggaggttccccgggtggtgaaggtgggagcaatgggattgggaca
aatcacgagccatgtgacatcctgcagcagagtttggctgaagccaacatcacagagcaa
agcttacaggaggcagaggctgagctggacctgggctcctttggcattcctggccttaca
caggtggtacagacactgcctgatgccagcctctctggggctggaggcactgccgttggt
gtaggcgttggtgttgggggagcagcagcaattttccctgggtcagccccgagcaccacg
gctactcctcacaatgccacagctgacatgctgggctctgtgcttgctcagcagggcctt
caactccaaccccaggtcatgaacaagaccattagtgttcagccatttatgcagcccatg
ggcctgggaaatgtgactcttcaacccatttcaagtctccaaacccttcctaatgggagt
cagtctggacatttgggtatcggacagattcaggttgtgggtcaacctacagtcatgact
atcaatcagtctgggcagccaatcctggctaaagccatgggtggttaccagctgcaccag
tctgggccagaggtatcaggtgctggttctcaggcgggaattggaggctcagggggtgga
cttctgatccaaggtaacaaagccactttgggatctccagctttaaatggaccggctgtt
tgtgtcagcagcacaaacagcagcagtggcggtacaatgactgctcctgctgggcttctt
ggctttggcagcaccactctaagttcaggaatgggaccccaggtgcaaactcaagggcaa
ataatgcagaacgtgatcatccagcgcacaccaacacccattcagcctaaaccccctcag
gggggagccatccagccaaaactcttcaaacagcagcagcagcacccacagccagcaccc
caaccgttgcaaaacgatgcccacaaggctttaggactgcaacaaattccagtttctgct
gctcagaatgtagccttcctgacaggaaagccaggctcaaatgttgtcctaagtactcaa
gcaacaacacaaggccaacagtttcagcaaaccatattcaagcaacaagcagcacaacca
tctggcaagcccctcagtgtacacttgttaaaccaacaaggcagcatcgttattccctct
cagacagttctgcaaggtcagaatcaccagtttctcctgccacagctacaggcaggtggg
cagatcctgacccagcaccctggtgggcacatcataactagtcagggacctggtggacag
ctcatcgcaaaccagattttaactgcaaaccagaacatcaacttgggtcaaatgttgact
tcacagggccatcctggagctgcccacatcctatctggatccattcagctccaacctggc
cagatgggcacacccaccctctttcagatgccggtctcattggcccagagtcaaagccag
acacagacccacactgtctcaggtcatgcccagacagtcatacagggcatgccgatccag
aactcccttaccatgcttagccaggtggaggggctgagtcctgcggtcagccttcagcca
gccctgcaacctcagctcggtggtgttcccagcagcagcagcagcagcacaggagctgca
accatggctcaaggccagcctggagagtgtgttactgtgctgggtagctccacagaccag
gctgctcatcccactcagcagcatgcagcgcaatcctctatcctcgccatgcaaccaggt
tcctctgtgtccactattaccacagtaccctcttcttctccgtccatgtctgtgtccacc
tcttcctctgtcacagcagtggggctggtcccccatcaggctcagcacagtccagggagg
ttactgttcaccaaccagggctccagtatgatcctgagccaggagtctctgcagatgttc
ttgcaacaggagcagcaccaccaatcagagaatgagtcaaccccctctgtgggcgtacct
gcgtctgtaatcgtcagcagcaacagcgtcactgctccggttcctgctgtccatgacagc
caattaactgactcttgggtgggtcagtgccacagccctccccctggcccctcccacatg
acagctgtggtaaagcaggtacccagtggacatcagcagtcactgaagatccaaggcatg
tcaccggcattgtccgctcatgccacgttacccttggtggcagacagcccccagcctttc
cagtctcctctcactttgacccagcagatccagtcaccgcaccatcaacagcatcctcgt
ccaccctctcagcctcagccgcagtctcaaactccctcccgctcatgcacaccctcaaat
catcctcagctctttattgtacataaccagatggcagagtccccccaaaccgctcagcaa
ggccagccgcagcagacacacattcaagttcagcttcagcctcagccacgaccggcctca
cagcctgccacttatcaacaagatatgcctcccatgtcacagtcgcccaagcctcctcct
acaccacctgcacagcaccagtttaccgttattcctatcagcacttctgccactgctgca
gttaaagcccaggttcccatccagggcctgacagcagagcagcagcaccacctgcaatta
ataggagcgcaacttcagaccctgtcaaccatcacccagccctcacttcagcagaaacag
ctgctggagaagctacaccaggttcagcataacatcctgctgcaggccaagcagtcgact
cagcctcaagtcaccagtcagttcagctcccagcaagacgtgcctgttgataaagtggtg
attgcaccatcggccaacactggtccacctgctcagcttctctcggtgctgcagccaaca
ccgatgctcgtcaaaacacctgttacagcatcaagtgacttacaggtattctcaggagcc
caagggccagctggagcaatgctgaatcagactgtcattcctgccagccttacccagcct
gtacaggttcagccaaagccaggggtgatcagctcagttggagggataactctggggaaa
ggaatgcaaatacaggtgttaggagctagtcttactcaaatgcctgctccacagcctcca
gttccagtccaaactcagacaacaacaatgaagatgcctttcagtgcagagcccagcaaa
gaggccaggatgctagaacagctgaggaaacagcagggttcagtgcttcacccaaactac
agtgcacctttccactctgttgaggacacactgcacagactgctgccttaccatctctac
cagggaactgccaactcttctcaagactatcaaagagtggatgatgaatttgagactgtc
tccagccatctgttgaaaaggacccaggccatgctggataagtatcgctacctgctcttt
gccgagtcaaaagtgtttaaacctgagcagagacttggcccctcggcagagatggtgatg
atagaccggatgttcattcaggaggagaagattgcgttgagtcaggacaggattttggcc
aaggagagaccagaggagtttgtggcaaacgcacgcatgttggggagtggagtttcatct
caacatacatcttcttctgaggccacgtctttcagtggaggtgtaccggctgctgtccct
gctccaccacctgccgctcctgccccagcccctctcccaaacattgccccaaatcctcct
tctgcacccgcccctgctctagttcctgccccagctccagcacctccttccaccaaccct
ttcccccctaccaaattagtaataaagcagggtgggggcggagcctctgtgtcctggtcc
agcagctgtcctccagctgcagcgagcaggctggctgaacccaccagccagagttcctcc
ttcagtcgcgctccaacagcatcctcctcctcctcttcgtccttcaactctacggcagcc
gatgatgacgacgctctcccacaaagaaccagcaaaccgcctatgaagacctacgaggct
cgcaggagaattggcttgaagctgaaaatcaaacaagatcaaacagggttcagtaaggtg
gtccacaacactgccttagacccagtgcacacaccacaacctcagcagagcagccagtcc
ataccccagcctaagactcagccccagtttgaaactgctgtaccgcacccaaagtcccaa
cctttatcaacccctccttctacagtcatcagaactcagtctcctgtatgcactgcttct
tctgcctcatcggtcaccacaacaaccactcagtgtaacccaccactgagaggtaatgtt
gcccccaatgcagccccatcttcctctacctcttcctcccgcacatggtcattgtccacc
tcctcctctactcaaatgaatgggacattggatcacagcaacgtgggtagggtcaaacac
aactctgcctccactgccactccctcacagacaacgtgccgtctcccccttcgaaaaacc
taccgggaaaacataagtccccgggtgagacctggtgtcccagggggaggagacgaaagt
ttgtcctacccgagacccacgccgtcaccccccaggcaggaggcctccccctctcccccc
tcagagcggacagttatagccagtgtgaaggtggagaaaagaggaagggaggcctcacac
actcacgcagagtcaagccacgaaacgtgccgattggggagtgcaatgcaggggctggac
gaaatggacgaggtgtttaaccgtggtatcaaaactgcacaacaccatcatcatgtccca
cagctcctagacagggaaggggcaaaggagagaggggaggagcacacagacttagaaaca
gacgtaagtaaatacaagagggtgagtgggaaaaatagacatagggcaggtgggacattc
agaatggaccctgggcctccctctccggagtcctccttcacacgagactctttgcttccc
gcgaaacgctgcaagtcagactctcccgacatggataacgccagcttctccagcggcagc
cctccggatgactctctaaacgagcacctgcagtgtgccattgatagcatcctaaacctg
cagcaggagccctctgcccgcgggcaccacattaaagggggcaacagcaggtcacaccaa
agccagcgcccagggggctcggcagcatcatcccacagaccctcagtaccatcctcctcc
tctgcttcctcatcctcctccttggcccagcaccctcaggtcggtggccgtggccacaat
ggcagcctggttcctcagactcaaagcagataa
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integrated database retrieval system
