Cyclopterus lumpus (lumpfish): 117741226
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Entry
117741226 CDS
T09199
Symbol
wdfy1
Name
(RefSeq) WD repeat and FYVE domain-containing protein 1
KO
K23299
WD repeat and FYVE domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117741226 (wdfy1)
Membrane trafficking [BR:
clum04131
]
Autophagy
Other autophagy associated proteins
Others
117741226 (wdfy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
FYVE
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
UNC-79
Motif
Other DBs
NCBI-GeneID:
117741226
NCBI-ProteinID:
XP_034403994
Ensembl:
ENSCLMG00005010662
UniProt:
A0A8C2XNI7
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Position
13:complement(18468693..18481064)
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AA seq
410 aa
AA seq
DB search
MAAEIHSRPQAARPILLNKIEGHSDAVNAAVLIPKEDGVITVSEDRTIRVWLKRDSGQYW
PSIYHTVSSPCSCMSYHHDSRRIFIGQDNGAIVEFLISEDFNKMSHVKTYPAHQSRVSDM
VFSLESEWVVSTGHDKSVSWMCTESGSMLGRHYFTAWASCLQYDHETQHAFIGDYSGQIT
LLKLEKQTYSIITTLKGHEGSIATLWWDPVQRLLFSGAADHSVIMWDIGGRKGRTLLLQG
HHERVQAVRYLQLTRQLVSCSADGGMAVWNMDAQREEAPQWLDCDSCQKCEQPFFWNIKQ
MWDTKTMGLRQHHCRKCGKAVCGKCSSKSTTFPIMGFEFPVRVCDACFDTVKEEDRTPLA
MFHEGKHNIAHMDMDPSRGLMVTCGSDRVVKIWDVTQVVGCSLATGFSSR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagatccactcgaggccgcaggccgccagaccgatcctgctcaacaagatc
gaggggcactcggacgccgtgaacgcggccgttttaatcccgaaagaagatggcgtgatc
acggtcagcgaggacagaaccatccgagtttggctgaaaagagacagcggccagtactgg
ccgagcatctaccacacagtctcctcgccgtgctcctgcatgtcgtatcaccatgacagc
aggcgcatcttcatcggccaggacaacggagccattgtggagtttctcatctctgaagat
ttcaacaagatgagccacgtcaagacatatccagcccaccagagccgcgtgtcagacatg
gtgttctccctggagagtgagtgggtggtgagcaccggccacgacaagagtgtgagctgg
atgtgcaccgagagcggcagcatgctggggaggcactacttcacggcctgggcctcctgc
ctgcaatacgaccacgagacgcagcacgccttcatcggcgactactcgggccagatcacg
ctgctgaagctggagaagcagacgtactccatcatcaccacgctgaagggtcacgaaggc
agcatcgccaccctgtggtgggaccccgtccagaggctgctgttctcgggggccgccgac
cacagcgtcatcatgtgggacatcgggggccgcaaaggacggacgttactgctgcaggga
caccacgagcgcgttcaggccgtgcggtacctccagctgaccaggcagttggtgtcgtgc
tcggccgacggcggcatggcggtgtggaacatggacgcgcagagagaagaggctcctcag
tggttagactgcgactcctgtcagaagtgcgagcagccgttcttctggaacatcaagcag
atgtgggacactaagaccatggggctccgacagcaccactgcaggaagtgtggcaaggca
gtgtgtgggaagtgtagctctaaaagcaccacgttccccatcatgggcttcgagttcccg
gtgcgcgtgtgcgacgcctgcttcgacacggtcaaagaagaagatcggacacctttggcc
atgttccacgaggggaaacacaacatcgcccacatggacatggacccgtccagaggcctg
atggtcacctgtggaagcgaccgcgttgtcaagatctgggatgtgacgcaggtggttggc
tgtagcttagcaacaggcttctcttcgcgctga
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