KEGG   Cyclopterus lumpus (lumpfish): 117741262
Entry
117741262         CDS       T09199                                 
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03440  Homologous recombination
clum04068  FoxO signaling pathway
clum04110  Cell cycle
clum04115  p53 signaling pathway
clum04210  Apoptosis
clum04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    117741262 (atm)
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    117741262 (atm)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117741262 (atm)
   04210 Apoptosis
    117741262 (atm)
   04115 p53 signaling pathway
    117741262 (atm)
   04218 Cellular senescence
    117741262 (atm)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:clum01001]
    117741262 (atm)
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clum03032]
    117741262 (atm)
   03036 Chromosome and associated proteins [BR:clum03036]
    117741262 (atm)
   03400 DNA repair and recombination proteins [BR:clum03400]
    117741262 (atm)
Enzymes [BR:clum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     117741262 (atm)
Protein kinases [BR:clum01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   117741262 (atm)
DNA replication proteins [BR:clum03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    117741262 (atm)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    117741262 (atm)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    117741262 (atm)
SSDB
Motif
Pfam: PI3_PI4_kinase FAT TAN FATC HEAT_ATR DUF3349
Other DBs
NCBI-GeneID: 117741262
NCBI-ProteinID: XP_034404069
Ensembl: ENSCLMG00005004417
LinkDB
Position
13:14712481..14734744
AA seq 3086 aa
MSLALHDLLLCCKGLDNDKVTERKKETERLRRLLRNPEVVQELDRCSGPQAKSSKQLTWD
TVFRYLQRYVQKETESMQSSKSNVSATTLATRHKKMAEICSLIKYFIRYANKRGPRLKCS
EMLKHVMDILQNSYSCSAFGENYSSLLVKDILSVRKYWCDIPPQQWHNLLNLYCDMFNAS
SKSINRVLLSRVIHTVVQGCCMQTDGFYNALFSFFSKALLNVRQEKHLTVLEHLISALNI
FLRSAAMNCRMRVCQLGEELLPSVLYVWAEMRPSVTLKEEIVEFFNLQICVHHPKGAKTQ
DTGAHAEDWTRWRSLLYNLYEALIREISNIGSRGKYVTGTRHIAVKDNLTELTADICHQL
FPDDNDTHIVEVTQASLRATHMGSPTSKRRRIELGWEVLRDHLQPQQNDFDVIPWLQIAA
VLTSKYPSMVPGQELVPLLSVLYQLLAEQRRGERGPYVLRCLREVARCQACYPERAQVHR
TELARLWGRVWALAMRGVSSPQTESLSLDLLSSIVHSGLINMDREFWKLFCGSACKPSQG
AALCLAQALLSCPTPKSIISRDYVGVTEGSATPNLKETLIAWLLMTDQSEEMEDSSRPHP
IICRDFPYNLIANILVSLTLKDTRTGLKRLLGTEGVESAFSQEQTTSNSKDNLEEIERLY
LQFSFNTLPSPRRDSGESATAASTHGQFAAVPCLRNKLEQSLLCVADNLLNCYSPDSQST
PPECLVRCFSLLTGVLAGYVSTGFLTSEEACRSQLYTKAKALAQDFSGFVSSVRVKMTEE
GTMSTLRSVMKLCTRSASRKNKDNVCPTSSSLFMMILPAGLLSELSEICKLLLSSVSKRV
SVVDEDDHMGDDLDVSRTQLGDDIDLFDEGEESHSSTNETRRQKGDNREASCGPGAKSLL
AEDHLAQQDVALLAALELLCECGSMQHVHGLLFKPQEVRRRLLLLVKQMDFSKALHLNLY
LVLLKKLPAEDSLSPEEFDSLLRPLADLCSLYRQDQEICAAVLLGLLPSITSLRKTHHMP
EEMRHVQGSLLQVVSGFCFLSQTGKCMAAVRAALVRCLVALLEADPCCNWAVLSIRGPDR
EEDRPVSVILPSHLADTHHQVRMLVAMSVERLFLETSPEHPDNRNMLPLKHQQAAFENVY
LKAQEGMKLPRSSSAEDQTDELFNRKATLLKTLSGVLCCSPVCEKQALFALFQSYKENSI
EEQLIKKMLCSVSRALGYKSVKTFVSSHLYYLVAEWLAQRQSDDRYTLGSFPYTLLDHDT
IKDFYSSSYQVLIPHLVFLDDFEQVKSIGRYLEKDWKELLADCFPKIMVNILPYFALSGQ
DSQVTQQREKAHKVYDLLKDANCLGKQQIDNLIHSNLADIVVELLMTLYEGSGAEGDRGD
LKLFIGELDPVPNPPYFNSYVIKATLDYLSKCQSANHKTVVAILSKTPISIQRILLAVCE
RAAETTNSYERHRILLMYHLFVNLLLREVKDGLGGAWAFVLRDIMYTLIHHLNSRPVKCD
EVSNRSLSLCCDLLTSVCRAALEFCDDALDCHLQVIVGTLTTQVKSRPAISQQVNILLQF
LVIENQEKLKGAISRLEPFPDLPEFRELRSVQHKLKYNTGSFTLRQEIAHFLSVTSCDSL
PLTRLEGLKELTRQLHDNKEQIRELLKECRTEPTDSVLVKLVLSLLQLCKLAANHPGGAD
ILEAAGSCLGEMGPVDFSTIALLHGRDPLYEKAVSLFTSTESQCLYIVLNCMNDALTQQR
IEVRQAAAQCVKSILATQSGVDFWEQHKDNRDPMLTYLNPFRKAKEKVEVVSDEVSLKAR
EKLVSQELWIPQAGGHKAWLNALCTSLLDSGGVRREALLLSRPLCLVRVDCCQRLLPLII
HSILLEDSNGLWRELLSSHIQDFFSFCSRSTQAASRSATPLNSDSESDAASQGLYDKTSL
RTMLAVVDYLRHQQRPLEADSNSCGTVCDSNFWLELNYLEVAKAAQSCSAHFTALLYTEI
YVDKIKANMEESRRTNSRATRMLNFEENSQNVTVSSLTKKSMEDTNISLQELLIEVYRSI
GEPDSLYGCGGETMTSPLTRIRTYEHEAMWGKALTSYDLHTPLPEVTRQVGIVEGLQNFG
LSSILATYMRGLESEGVECGAELRELRFQAAWRNTQWDCELSERSENSKSSFHESLFCSL
QALRDEEFSVFYETMKQARGADVEELCRGSLEAVSSLYPSLRNLQSIRELESVKQLFSRP
FSDLTLREVCSQWRQHSQLLADSDFALVEPILAVRTVALHTLISRVGDPDSTQYLSSVLT
DHLMELCRLARKAGNTQLAERAVFQMKQRGGGGFLDSPPVLSWQLEEAQVFWAKGEQGLA
LGLLRQMIHNLEDKVDLNPAVVPVYTECLRLCGNWLAETCLESPGVILEKYLERAVELIE
EESGVHDSRLQSQRTEAFLSLARFSDAQYQSIDKYMNSSEFENKQALLEKAKEEVDLIKE
RKVTSNRYTVKVEKELQLDEKALSNLRADRQRFLCKAVENYIQCLEEGEEHDTWVFRLAS
LWLENDGVKAVNDMMKKGGKRIPSYKFLPLMYQLAARMGTKMATGISEDTGFHDVLRELI
CRASLEHPHHTLFIILALVNANKDENFCKTRLSKSAPRQPSPFDLERSDVAQKIISVIRK
KRGKMVRGLERLCDAYIILAYMDASKHKTEKKALPIPADQPIMQIKDLDEVTIPTMEIKV
DPSGCYDNLVTVRSFMPHYRLVGGVNLPKIIDCVGSDGKSRRQLVKGQDDLRQDAVMQQV
FSMCSMLLQRNTDTRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDPNKGAHKRF
RPRDPTNLACRKKMMEAQRLASDEKLQAYTEVCKSFRPVFRYFCMERFLDPAVWMEKRLA
YTRSVATSSIVGYIVGLGDRHNQNILVDEQTAELVHIDLGVAFEQGKILPTPETVPFRLS
RDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKAFYLQ
LDEQQELNATLGSTMGGDDIDNHRKSSDSQHFNKVAKRVLLRLQDKLKGVEEGAVLSVGG
QVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq 9261 nt   +upstreamnt  +downstreamnt
atgagtctggctcttcatgatctcctgctctgctgcaaggggctggataatgacaaggtc
acagagaggaagaaagaaactgaacgcttaagaagactccttcgaaatccagaggttgta
caggagttggatcgttgctccggacctcaagctaaaagctccaagcaactcacatgggat
actgttttcagatatttgcagcgttatgtccagaaggagacagagagcatgcaatcaagt
aaatccaacgtctctgcgacgactctggccacgcggcacaagaagatggctgaaatatgc
agcttgatcaaatacttcattcgttacgcaaacaaacgcgggcctcgtcttaagtgcagt
gagatgctgaaacatgtgatggacatcctgcagaattcatacagctgctcagccttcgga
gaaaattatagcagcctcttagtgaaggacatcctctctgtccgcaagtactggtgtgac
atccctccgcagcagtggcacaatcttttgaacttgtactgcgacatgtttaatgcttcg
tccaagtccatcaaccgcgtgttgctaagcagagtgatccacacggtggtgcagggctgc
tgcatgcagactgacggattctacaacgctctgttcagcttcttctccaaagcacttcta
aatgtcaggcaggagaagcacttgactgttttggagcacctcatctcggcgctcaacatc
ttcttgagatccgcggccatgaactgtcgcatgagggtgtgtcagctgggagaggagctt
ctgccctctgtgctgtatgtctgggcggagatgaggcccagtgtgactctcaaagaggag
attgtggagttctttaacctgcagatttgtgtccaccaccccaaaggagccaagacacaa
gacacgggtgctcatgctgaggactggaccaggtggcgcagtctgctgtacaacctgtat
gaagccttaatcagagaaattagcaatataggcagcagagggaagtacgtcaccgggaca
cgacacatagctgtcaaagacaatctcactgagctcacagctgacatctgtcatcagctg
ttccctgatgacaatgacacccatatcgtggaggtgacccaggcttccctcagagccaca
cacatgggcagtcccaccagcaagcgacggcgcattgaactgggctgggaggtcctccgg
gaccatctgcagcctcagcaaaatgactttgatgtcataccatggctgcagatcgctgca
gtgctcacctctaagtacccgtccatggtgcccggccaggagctggtcccgctgctgtca
gtgttgtaccagctcctggcagaacagcggagaggagagcgggggccatacgtgctgcgt
tgtctgagggaggtggctcggtgccaggcctgctacccagaaagggcccaagtccacagg
acggagctggcccggctgtggggtcgggtgtgggccctggcaatgcgaggggtcagctca
cctcagacggagtccctcagcctggacctgctgagctccattgtccacagtggactcatc
aatatggacagagaattctggaagctcttctgtggatcagcatgtaaaccgtctcaggga
gctgctctctgcctcgcccaagccctgctgagctgtccgacccctaaaagtatcatctca
agggactatgtgggggtcacagagggttctgcaacacccaacctgaaggagaccctcata
gcctggctgctgatgaccgatcagagcgaggagatggaggacagctccagacctcacccc
atcatctgcagagactttccttacaacctaatagcgaacatcttggtctccctgaccttg
aaagacacgagaactggcctgaagcgtctgctgggtactgaaggagtagaaagtgctttt
tctcaagaacaaacaacatccaactccaaagacaacctggaagagatcgagaggctttac
ctgcagttcagcttcaacacgctgccctcaccgaggcgagactctggcgagtccgcgacc
gcggcttcaactcacggacaattcgctgctgtcccgtgcctcagaaacaagttggagcaa
tctctgctttgtgtggctgacaacctgctcaactgctactctcccgattctcagtccacg
cctccagagtgtctggtgcgctgcttcagtctactgacgggagttctagcaggttacgtg
tccactgggtttctgacttcggaggaggcctgccgctcacaactctacacgaaagccaag
gccctggcccaggacttcagcgggtttgtttctagtgtgagagtgaagatgactgaggaa
ggaaccatgagcactctgagatctgtcatgaagctctgcacacggtcagccagcagaaaa
aacaaggataatgtttgtcctacctcctccagtctgttcatgatgattctgccggccggt
ctcctcagtgaactgtctgagatctgcaaactgttgttaagcagtgtttctaagagagtc
agtgtcgtggatgaagacgatcatatgggtgatgacttggacgtgagcagaactcaacta
ggggacgacattgacctgtttgatgagggcgaagagtcccacagcagcaccaatgagact
cgcagacagaagggggacaacagggaggcttcctgtgggccaggtgcaaaaagcctgtta
gcagaggatcatctggcccaacaggacgtggctctcctcgcagccttggagctcctgtgt
gagtgcggctccatgcagcacgtccacggtctgctgttcaaaccacaggaggtgcggcgc
agactgctgctgctggtgaagcagatggacttcagcaaagccctgcacctcaacctgtat
cttgtcctgttgaagaagcttccagctgaggactcgctctctccggaggaatttgattcg
ctgctccgtcctctcgcggacctgtgttctttgtaccgtcaggaccaagagatctgtgct
gctgtactgctgggtttgttaccctccatcacgagcctcaggaaaacccaccacatgccg
gaggagatgagacatgttcagggatctctgctacaagtggtgtctggattctgtttcctg
agccaaacggggaaatgcatggcagctgtacgagctgcgttagtgagatgtctggttgcc
ttgctggaggctgacccttgttgtaattgggcggtcttaagtatcagagggcccgacaga
gaggaagatcgcccagtgtctgtcatccttccttctcacctcgcagacacccaccaccaa
gtccgcatgctggtcgccatgtcagtggagaggttgtttctggagacgagtccagagcat
ccagataacaggaacatgctgccgctgaaacaccagcaggcggcttttgagaacgtttac
ctgaaggctcaggaaggaatgaagctcccgagaagcagctctgccgaagatcagacggac
gagttgtttaaccgcaaggccaccctgctgaagactttgtctggcgtgctctgttgtagt
cctgtctgtgagaaacaggccctgtttgccctcttccagtcctacaaggagaacagtata
gaggaacagctcatcaaaaagatgctgtgcagtgtatccagagcgctgggctacaagagt
gtgaaaacatttgtcagttctcacctgtactacctggtagctgagtggctggcgcagaga
cagtccgacgatcgctacactcttggatctttcccctacaccctcctagaccacgacaca
atcaaagatttctatagctcttcctaccaggtgttaatcccccacctggtcttcctggat
gactttgagcaggtgaagtctatcggcaggtatcttgagaaggactggaaagagttattg
gccgactgtttccccaagatcatggtcaacatcctgccatactttgccttgtctggccag
gactcacaggtcacacagcagagggagaaggctcacaaagtgtacgacctgctcaaagat
gccaactgtctgggcaaacagcaaattgacaacctgatccacagtaacctggcggacata
gtggtcgaactgctgatgactctgtatgaaggaagtggagctgaaggggaccgaggagac
ctgaagctctttataggggaactggacccggtaccaaacccgccatacttcaactcttat
gtcattaaagctacactggactacctcagcaagtgccaaagtgcaaaccacaagactgtg
gtagccattctttcaaaaactccaatttccatccagaggattctactggcggtgtgtgaa
cgagcggcagagacgaccaacagctatgaacgtcatcgcatcctcctcatgtatcacctg
tttgtcaacctgctgctcagggaggtgaaggacggcctcgggggagcctgggccttcgtc
ctcagggacatcatgtacacactcattcaccatctcaacagcagaccagttaaatgtgat
gaggtttctaaccggagcctctctctgtgctgcgacctgttgacctctgtgtgtcgggca
gctctggagttctgtgacgatgctctggactgccacctacaggtcatcgttgggactctc
acaactcaggtgaaaagccggcccgccatctcacagcaggtgaacattctgctgcagttt
ctcgtgatagaaaatcaggagaagttaaaaggggccatcagcaggttggagccttttcct
gacctccctgaattccgagagctgcgctctgtgcagcacaagctcaaatataacactggg
agcttcacactgagacaggagatagcccacttcctgtcagtgacgtcatgtgactcctta
cctctgaccagactggaggggctgaaggagctgaccagacagctgcatgacaacaaggaa
cagatcagagagctgctcaaagagtgccgcactgaacccactgacagtgtgctggtgaag
ctggttctcagtctgctgcagctctgtaagctagcagccaaccacccgggaggagcagac
attcttgaggcagcaggcagctgtctgggagaaatgggtcccgtggatttctccaccatc
gccctgcttcatggcagagaccctctgtatgaaaaggctgtctctctcttcacttccacc
gagtcgcagtgtctttacatcgtcctcaactgcatgaatgacgcactcactcaacagcgt
atcgaggtgaggcaggcagccgctcagtgtgtgaagagcatcctcgccactcagtctgga
gtcgatttctgggagcagcacaaagacaacagagaccccatgctgacctacctcaacccc
ttcagaaaggccaaggagaaggtggaagttgtgagtgatgaggtgagtttgaaggccagg
gagaagctggtgagtcaggagctttggattccccaggcgggcggccacaaggcctggctg
aatgctctgtgcacctccctgctcgacagcggaggagtcaggagagaagctcttctgctg
tcacgaccgctatgtctggtgagggtggactgctgtcagaggctgctgccgctcatcatt
cactccatccttctggaagacagtaatggtttgtggagggagttgctctcctcccacatt
caggacttcttcagcttctgttccaggagcactcaggctgccagtcgctctgccacgcct
ctcaactctgactccgagtcagatgctgccagtcagggcttgtacgacaagacctctctg
cgtacaatgcttgccgttgttgactatctgcgacaccaacagagaccactggaagctgat
agcaactcctgtggcacggtgtgtgactcaaacttctggctggagctgaactacctggag
gtggccaaagccgctcagtcctgttcggcacatttcacggctctgctatacactgagatc
tatgtggataagatcaaagctaacatggaggaaagtcgacgaaccaactccagagcaaca
cgtatgctcaattttgaagagaacagccagaacgtcactgtctccagcctcactaagaag
agtatggaagacaccaatatcagcctgcaggagctgctgattgaggtttatcgcagcatc
ggagagcctgatagtctgtacggctgcggcggggagacgatgaccagtccactgacgagg
attcgaacctatgagcatgaggcgatgtggggcaaggccctgacttcatacgaccttcac
actcctctgcctgaggtcactcgtcaagtgggaatcgtggagggcctgcagaactttggt
ctgagcagcatccttgccacctacatgaggggtctggagagtgaaggggtggagtgtgga
gctgagctgagagagctccgctttcaggccgcctggaggaacacacagtgggactgtgag
ctgtcggagaggagtgaaaattccaaatccagctttcacgaatccctgttttgttccctc
caagcgctgagggacgaagagttctccgtattttatgaaacaatgaaacaggccaggggt
gcagatgtggaggagctgtgcagaggcagtctggaggctgtgtcttctctgtacccgtct
ctcaggaacctgcagagcatcagggagctggagagtgtgaaacagctcttttctaggccc
ttctcggatctgactctgagggaagtttgtagccagtggcgacagcactcccagctgctc
gctgacagtgactttgctttggtggagcccattctggccgtccgcaccgtggccctccac
accctgatatctagggtgggagaccccgacagcacccagtacctcagctctgtgctcact
gaccacctcatggagctctgccggctggctcgaaaggctgggaatacgcagctcgcagag
cgggcagtcttccagatgaagcagcgtggtggtggagggttcttggattcacctcctgtg
ttgtcatggcaactggaagaggcccaggtgttctgggcaaaaggggagcagggacttgcc
ctgggcctgctgagacagatgatacacaaccttgaggacaaggtggacttgaatcctgct
gtggtcccggtctacactgagtgcctcaggctgtgtggtaactggctggctgagacttgc
ctggaaagccccggagtaatactggagaaatacctggagcgggcggtggagctgatcgag
gaggaatcaggagttcacgactccaggctgcagagtcagcggactgaggccttcctgtct
ctggcccgcttctctgatgctcagtaccagagcatcgacaaatacatgaactcctctgag
tttgagaacaagcaggcgctgctggagaaggccaaagaagaagtggacttgataaaggag
cgtaaagtgacttccaacaggtacacagtgaaggtggagaaagagctgcagctagatgag
aaggccctgtccaacctgcgggccgacagacagcgtttcctgtgtaaagctgtagagaat
tacatccagtgtctggaggaaggtgaggagcatgacacctgggtgtttcgcctggcttcg
ctgtggctggagaatgacggcgttaaggctgtaaacgacatgatgaagaaaggggggaag
cggatcccttcctacaagtttctgcctctcatgtatcagctggctgctcgcatgggaacc
aagatggctactggcattagtgaggatacaggcttccatgatgtcctcagagagctgatc
tgccgagcgtctctggagcaccctcatcacacactcttcatcatcctcgccctggtgaac
gccaacaaagatgagaacttttgcaagacccgactgtctaagagcgctcctcggcagcct
tcaccgttcgacctggagcggtcagacgtggcccagaagatcatcagtgtgatcaggaaa
aagagaggcaagatggtacgagggctcgagcgtctgtgtgacgcctacatcattctggct
tatatggacgccagcaagcacaagacggagaagaaggctcttcccatccctgctgatcag
cccatcatgcaaataaaagacctggatgaggttaccatccccacaatggagatcaaggtg
gatccatctggttgctatgacaacctggtgactgtcaggtccttcatgccccattatcgc
ctggtcggaggagtcaacctgcccaagatcatcgactgtgtcggctccgacggcaagagc
aggagacagctggtcaagggtcaggacgacctgcggcaggacgcggtgatgcagcaggtc
ttcagcatgtgctccatgctgctgcagcgcaacacggacacccgcaagaggaagctcaac
atcagacgatataaggtggtgccgttctcccagcgtagcggcgtgttggagtggtgttcg
ggcactgtgcctattggggagtttctggtggatcccaataaaggagcccacaaacgcttc
cgacctcgggacccgaccaacctggcctgccgcaagaagatgatggaggctcagaggctg
gcgtccgatgagaagctccaggcttacactgaggtgtgcaaaagcttcaggccggtcttc
aggtatttctgcatggaacgattcctggaccccgcggtgtggatggagaaacggctggct
tatactcgcagtgtggccacctcttctatagttggctacatcgtcggcctgggtgacaga
cacaaccagaatattctggttgacgagcagaccgctgaactggtgcacatcgatctaggt
gttgccttcgagcaggggaagatcctccccacccccgagactgtccccttcaggctgtcc
agagacatcgtggacgggatgggcatcactggagtggagggggttttcaggagatgttgt
gagaagacgatggaggtgatgaggagctctcaagaagctctgctgactattgtagaggtg
ctgctgtatgaccctttgtttgactggaccatgaacccactgaaggccttctacctgcag
cttgacgagcagcaggagctcaacgcaacgctgggctccaccatggggggggatgacata
gacaaccaccgtaaatccagtgacagtcaacacttcaacaaagtggcgaagcgggtgctg
ctgaggctgcaggataagctgaagggggtggaggagggcgcggtgctcagcgtggggggg
caggtcaacctgctcatccaacaagccatggaccccaaaaacctcagtagactcttcccc
ggctggcaggcctgggtgtag

DBGET integrated database retrieval system