Cyclopterus lumpus (lumpfish): 117741285
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Entry
117741285 CDS
T09199
Symbol
hnrnpul1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117741285 (hnrnpul1)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117741285 (hnrnpul1)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
117741285 (hnrnpul1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117741285 (hnrnpul1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
Motif
Other DBs
NCBI-GeneID:
117741285
NCBI-ProteinID:
XP_034404120
LinkDB
All DBs
Position
13:12292187..12303196
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AA seq
902 aa
AA seq
DB search
MSVDVKKLKVNELKEELKRRGLDTKGLKGELVDRLKAAQEADSRGDTSDQGEQEDQDFKE
NEEDGEEDEPEQQDAEVAEDNGAGDDDDNDEGEGDNDHGEGDNDHSEGDGENVAPQEEDE
GRDSGGYYEDEEAEGEPYESRPTSDSGHSMPDLPPDVDAQKSNVSDEQSKPVPEPEPMEK
DVNEPEMKVEVKMESDPGADEDTKQDSHRTEQQDGQDGEPQAEEIKVEADKSGHHGRKRP
YEESRSYSYYEHREEKRSRTPQPPAEDEEENIDDTLVTVDTYNCDLHFKVSRDRYSGYPL
TIEGFAYLWAGARATHGVTQGRVFYEMKINEEIPVKHLPSSEPDPHVVRIGWSLNHCSTQ
LGEEPLSFGYGGTGKKSADCKFADFGEKFGENDVIGCYIDFDTGEEVEMGYSKNGVSLGV
AFRTTKEELAGRALFPHVLVKNCAVEFNFGQRPQPYFPPPEGYTYIHNLGMEDKIRGTKG
PAIKSECEILMMVGLPACGKTTWAIKYAETNPEKKYNILGTNAIMDKMKVMGLRRQKNYS
GRWDVLIQQATQCLNRLIEIAARKRRNYILDQTNVYGSARRRKMRPFEGFQRKAIVICPT
DEDLKERTLKQTNEQGKDVPDHAVLEMKANFTIPEACDFLEAVTFAELQCDEAESLLKQY
NEEGRKAGPPPEKRFDNRQGGFRGRGGGGNGGGGSFQRYDNRDGSRGGYQNRGGDGGSGY
RGAGYNRGSYNQNRWGSSYRDGGGDARGSYNRSQQSGGSYNRPASYSKGAYSQGYSQSYS
QGYNPSSYNQSYYGSYSQYPGYSQSYSQTPTTAQTYNHHQQQPQQQQQQQQQQQQQPQQQ
QQQQQQQQPQQQPQPQQSYNQQYQQYAQQWQQYYQNQNQWNQYYSQYGGYPGQGSQGSSG
SQ
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgacgtgaagaaactgaaagtcaatgaactaaaagaggagctcaagcgccgc
ggcctggacaccaaaggcctgaagggagaactggtggataggctgaaagccgctcaggag
gctgactctcggggtgatacctcagaccagggagagcaggaagatcaggacttcaaagaa
aacgaagaagatggagaggaggatgaaccagagcaacaggatgcagaagtagctgaggac
aatggtgcaggtgatgatgatgataatgatgaaggtgaaggcgataatgatcatggtgaa
ggcgataatgatcacagtgaaggcgatggtgaaaatgttgcccctcaagaggaagatgag
ggtcgagattcaggtggttactatgaggacgaggaggcagaaggcgagccttatgagagt
cgtccaacttcagactcgggtcacagcatgcctgacttaccaccagatgttgacgcacag
aaatccaacgtgtcagatgaacaatccaagcctgtgccagagccagaacctatggaaaaa
gatgtgaatgaaccagaaatgaaagtggaggtcaaaatggaaagtgaccctggagctgat
gaagacacaaagcaggacagccacaggacagaacagcaggacggccaagatggtgaacct
caggctgaagaaatcaaagtggaagctgataaaagcggccaccacggccgcaagagacca
tacgaggagagcaggagctacagctactacgagcaccgcgaggagaagagatcccgcact
ccacagccccctgctgaagatgaggaggagaacatagatgacactcttgttacagttgat
acgtacaactgtgatctgcatttcaaagtgtcccgagatcgttacagtggttatccactg
accatcgaaggctttgcctacctgtgggctggagcacgggccacgcatggtgtcacgcag
ggccgtgtattttatgagatgaagatcaatgaggagattcctgtaaagcacctgcccagt
agtgagccagatccccatgttgtcagaattggatggtctctcaaccactgcagcactcag
cttggtgaggagcccctttcctttggatatggaggaacaggaaagaaatccgcagactgt
aagtttgcagactttggtgaaaagtttggcgagaacgacgtcatcggctgttacattgac
tttgacactggtgaagaggtagagatgggctattccaaaaatggagtctcactgggtgtg
gctttccggacaaccaaggaggagctggcaggccgtgccctgttccctcacgtcctggtg
aagaattgtgccgttgagttcaactttggtcagaggccgcagccgtacttccccccacca
gagggatacacctacatccacaatctaggaatggaggataagatcagaggcacaaaggga
cctgccattaaatctgaatgcgagatcttgatgatggtcggcctgcctgcctgtggaaag
accacctgggccatcaagtatgcagagactaaccctgagaagaagtacaacatcctgggc
acaaatgccatcatggacaagatgaaggtcatgggtctgcgtcgccagaaaaactactcc
ggccgctgggacgttctgatccagcaggccacccagtgtctgaaccggctgattgagatc
gctgcccgcaagagacgcaactacatcctagaccagacaaatgtatatggatcagccagg
agacgaaaaatgcgtccttttgaaggttttcaacgcaaggctattgtaatttgtcccacg
gacgaggatttaaaagaacgaacattaaagcaaaccaatgagcaggggaaggatgtgccc
gatcatgctgttttagaaatgaaagccaactttactatccctgaggcttgcgacttcctg
gaggcggtgacattcgctgagctgcagtgcgacgaggctgaaagtctgctaaagcagtac
aatgaggagggccgcaaggctggcccaccccctgagaaacgctttgacaacaggcagggc
gggttccgcggccgcggcggcggtggtaacggtggcggcggtagcttccagcgatatgac
aaccgcgatggatcccgcggtggctaccagaaccgcggtggagacggaggcagcgggtac
agaggagcaggctacaatcgtggcagctataaccaaaaccgttggggcagcagctaccgc
gacggtggcggcgatgcccgtgggagttataaccgcagccagcagtcaggagggagctac
aatcgcccggcctcttacagcaagggagcatacagccagggctacagccagagctacagt
caagggtacaaccctagcagctacaaccagagttactatggcagctacagtcagtaccca
ggatacagccagagctacagccagacacctaccactgcacagacttacaaccaccaccag
caacaaccgcagcagcagcagcagcaacaacagcaacaacagcagcagccacaacaacag
cagcagcagcagcagcagcagcagccacaacagcaaccgcagccgcaacagagctacaac
cagcaatatcagcagtacgctcagcagtggcagcagtactaccagaaccagaaccagtgg
aaccagtattacagccagtatggcggctaccctggacagggcagccagggctcatctgga
tcccagtag
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