Cyclopterus lumpus (lumpfish): 117741307
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Entry
117741307 CDS
T09199
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04517
IgSF CAM signaling
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117741307
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117741307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117741307
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117741307
Intermediate filaments
Intermediate filament-binding proteins
117741307
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
PH_4
Motif
Other DBs
NCBI-GeneID:
117741307
NCBI-ProteinID:
XP_034404153
LinkDB
All DBs
Position
13
Genome browser
AA seq
2699 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPSSSGFWETECTSSKLFECSRIRALADERDAVQKKTFT
KWVNSHLSRVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPGVNIQNFTTCWRDGLAFNALIHRHRSDLIEFHKLTRSNATHNLQQAFNIA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCVEAE
KIVNRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKLYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMEVEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEETQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVETLNTAALKFTTVEGYQ
PCDPQVICNRVNHVSTCLEELKQLAVKRRDELEESRQLWAFFQDLEESEAWIREKSAILG
AQGNGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQERIMEV
KGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAVDKHRMHVVALRKHMVVLPLQYREQEEVQVRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
QCAEIKSQIQDKRKAIDATQYVGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEHM
ATAHPGRAMEVLVPFDGISLEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDLLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNDLLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERIDTLANRGNQNRE
LAQQWLEKLNDQWELQRFLQDCHELGDWVCEKMLMAKDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSAVVRRKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLHTMENQMEVWYKEVGQLQVQ
VASIPQQTQIKETVAGRQAVVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWIQ
ERLPMAMSQEHGSSLQAVQQLMKKNQTLQRELQGHRSRIDDVLERAGIIASIRSPEANCV
RAGYDQLAQLWALLWAETERRQLILDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETVGLLSQQCRQLLEMGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVTVLQEKFTEF
ATETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREALAQIEDKHRRLPEVRARQGSTANTSTLQRLLQSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQLWKELLTSCEECRVQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLQSEVEARTRSTLECIEMGKTLLAAR
NPAAEEIKERLHKVVAKQYELSEKWDKHWDFLQQLLEVHQFAQEAVVAEAWLTAQEPLIS
SNELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDALPNASTLPRLPISPVMRQTIYEQNEANSPPSPSLATPTPSPLSVARRLGSTV
ANYTPVMNGSSYRPTLEARHSVVVGVAAGLGQPASSSIASVATAALLVSANQAREIAGTT
RDQATKAMSHLHPAQAARTLEAKSSPYLRQAKIKHMDDAVTPLIVASRLEKARERERDMM
VEEIGTERVEVAVMAEVVLQEPSRERLHSEPTRGPQGSRTVLLGRAEPQVQTHGHHGDHR
IERQLSSEQLIQARRDELPQELWREQAERREKRTLERQTSSEHEGHGGHEGRRRERDRHR
LEKQESSEHDTGKEHSDRRSGGGEKRSTMAEIVEQLQEREAAQARGEVPRLPNGVPEKPS
RLDRPRARDRPKPRRRPRPKEAGETTRRSRSAPAQSSPAVPQPPTHTAHHEGFLFRKLDI
ETLKKSTNSRSWVNLYCVLNKGEMGFYKDAKNTATPYNSEPLLNLSHCHCDVTNGYKKKK
NVFTLKTKDGSEFLFHAKDEDDLKVWVTNITASITEHEEIFKWGQPQPTTSSTDEGTRRD
GSKADNRSERGGERSDCGERIERAEMETEKEKERGERSERSDRGGKLDAKRSEKSGKKK
NT seq
8100 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgcggaagcccagcgccagctcaacaacaac
aaccgaccaagcagctcaggattctgggagacggagtgcaccagctccaagctgtttgag
tgctcccgcatcagggccctggcagatgagcgagatgcagtgcagaagaagacttttacc
aagtgggtcaactcccatctgtccagagtgtcttgtcgcatagcggacctctacaacgac
ctgagggatggatacatgctcaccagactgctggaggtcctcagtggagagctgctgccg
aggcctacacggggtcgaatgcggatccactgcctggagaatgtggacaaagccctgcag
ttccttaaagaacagagggttcacctggaaaatgtgggttcccacgacattgtggatggc
aaccaccgtctcaccctgggccttatgtggaccatcatcctgcgcttccagatccaggtg
atcaaaatagagacggaggacaacagagaaactcgctccgccaaagacgccctgctgctc
tggtgccagatgaagactgcagggtaccctggggtcaacatccagaacttcaccacctgc
tggagagatggactcgccttcaacgccctcatacacagacacagatccgacctgatagag
ttccacaagctgacgcggtccaatgcaacccacaacctccagcaagcctttaacatcgct
gagcagcacctgggcctcaccaaactcctggacccggaggatgtgaacacagagaaccca
gacgagaagtccatcatcacgtatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggttctagacaactgcgttgaggcggag
aagatcgtcaaccgctacgaggctctggcatcggacctgctggactggatagaaaagacc
atcgcggtcatcagcaaccagaagtttgccaactcgctgaccggagttcagcagcagcta
caggccttcacaacctactgcaccatcgagaagcccatcaagttccaggagaaggggaat
ctcgaggtccttctgttcaccatccaaagcaagctcagagccaacaatcagaaactctac
gtgcctcatgatgggaagctcatctcagacatcaacaaggcctgggagaggcttgagaag
gcagaacatgagcggggcgtggctctgcgcaaggagctgattcgtcaggagaagctggag
ctgctggctcagtgctttgaccacaagaccaccatgagacaagcctggctcaatgagaac
cagagactcgtatcgcaggacaattttggctacgaccttccagcagtcgaggcagcaatg
aagaaacacgaggccatcgaggcggacatcgcctcgtacgaagagagaatcggagtggtg
gtggaactggcggcggagatggaggtcgaaggatactacgacatccggcgtatcctggca
cggaaggagaacatcctaggccagtggagtctgctgaaggagctggtggctgggaggagg
acccggctggagaagaacctggccctgcagaagactttccaggacatggtctatatgatc
gactggatggaggaaacacaggtccagcttctgtccaaggactttgggaagcatctcctg
gaggtggacgacctgctgcagaaacacagcctgcaggaagccgacattacggtgcaggcc
gagagggtcgagaccctcaacactgctgcgctcaaattcaccactgtagagggttaccaa
ccgtgcgacccgcaggtgatctgtaaccgtgtcaaccacgtctctacctgcctggaggag
ctgaaacaactggcagtgaaacggcgtgatgagctcgaggagtcgagacaactgtgggcc
ttctttcaggatctggaggagtcggaggcctggatcagggagaagagcgccatcctggga
gctcagggtaacgggaaggacctgagcagtgtgctgaagttactacagaaacacaaaacc
ctggctggagaactgctggctcaccggtcgctgctgcagaacaccatgaagcgaggaaag
cagatcctgagtgagaagagcttcggcacggcgggcatccaggagcgcatcatggaggtg
aagggcgagtggaagaggctggaggaccaggccgcgcagcgtctcggccacctgcaggag
gcgctcaactttttccagttctccacggagacggacgacctggtggcgtggttgcaggat
gcctaccgcctggtctccagcgaggactttggacacgacgagtactctacccagtctctt
ctgaagaagcaccggggggtcagcgaggccgttgataaacatcgtatgcatgtcgtggct
ctgcgcaaacacatggtggtgctgcctctgcagtaccgtgaacaggaggaggtgcaggtg
cgcatgggagaggtagagcagctttacaccgaggtggccgaggtggcggtgctcagacag
caatggctccacgacgcccttgccgtctaccgcatgttcagcgaggtcaacgcctgtgag
ctgtggattgacgagaaggagcagtggctggacaagatggagatcccagagagactggag
gatgtggagatggtggcacacaggtttgagagcctggaccaagagatgaacagcctgatg
ggaaggatcctagacgttaaccagatagttcagcagctcttggatggaggtcatccgtcc
tcgacagaggtcagaggttgtcaggatcacctcaactccaggtggaacagcattgtggag
ctggtggaacagaagaaagatcagctggactccatgctacgcctgcagaactacctgctg
caatgtgccgagatcaagtcccagatccaggacaagagaaaagccatcgacgccactcag
tacgtaggcagcgacctgggaggagtcctggctctgcagagacgcctctccaccatggag
ggagccctgtctgttctggagcccaaactgctgcatctacaggaggaggcggagcacatg
gccaccgcccacccaggtcgggccatggaggttctcgtgccgttcgacggcatcagcttg
gagtgggaggagctgaaacgcaccctgcagggctgcgaggactcactgatggtagcaagc
agactgcagagcttcatacaggacctggactctttcctcacctggttggtccagacgcag
acggccgccgcctcagacctgcttcccaacgacctggaagaggctgagaaactcatcaac
aaacacgcagccctgaaggaggagattggacggtacgaggaggattacgagcgcctgcag
gccatgaacgatctgctcgagtccgaggaggctcccctccctcaggccgccctacagcag
tggctccaaaagctcgatgtcggctggaacaaactcctggagatgtgggagagccggagg
gaggttctagtccaggctcacatcttccacctcttcctgcgagatgtcaaacaggcagaa
tccttcctcaacaaccaggagtcggccctcgctcacgtggagctgcccaccacggtggaa
acggtggaggccgccataaagaaacacaaggacttcaccaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaggctggagagagtctgatcagccagagcaacatctac
tccgaccgcatcaaggaacgcatcgacacccttgccaacaggggaaaccagaaccgagag
ctggcccagcagtggctggaaaaactgaacgaccagtgggaacttcagaggtttcttcag
gactgtcacgagctgggggactgggtgtgtgagaagatgctgatggcgaaggacagcagc
cgagacgagacccagaagctccataaaaaatggctgaagcaccaggccttcatggccgag
ttggcccagaacaaggagtggctggacaaaattgaaaaggagggccagcagctgatccag
gagaagccggagctcagcgcagtggtccggaggaagctagaggagatcagggaatgctgg
caggacctggagagcaccacccaggccaaagcccgccagctctttgaggccaacaaggcc
gacctgctggtgcagagctacgaaagcctggaccagagactgggccagctggagggtcag
ctagcctatgtggaccagggacaggaccttaccactgtcaacaagcagctgaaaaagcta
cataccatggagaatcagatggaggtgtggtataaggaggtggggcagctccaggtgcag
gtggcctctatcccgcagcagacgcagatcaaggagacggttgctggccgccaagctgtt
gtggaggccaggatggtgcgtctgatcgagccactgaaggagagacggcgcatcctgctg
gcgtcgaaggaagttcaccaagtcggacgagacctggaggatgagattttgtggatccag
gagcgcctcccaatggccatgtctcaggagcatggctcctctctgcaggcagtccagcag
ctcatgaagaagaaccagacccttcagagggagctgcagggccacaggagccggatcgac
gatgtcctggagagggcggggatcatcgcctccatacgcagcccggaggccaactgcgtc
agggcgggctacgaccagctggcccagctgtgggctctgctctgggccgaaaccgagcga
aggcagctgatcctggacgccatgtaccaggcccagcagtactacttcgacacggccgag
gtggaggcctggctgagcgagcaggagctgcacatgatgaacgaggagaaggggaaagac
gagccgagcacactgcagctgctgaagaaacacctggtcctggaacagaccatcgaggac
tacgccgagaccgtcggcctgctgtcacagcaatgtcgacagctgctggagatgggccat
ccagactgcgagcagatcagcaagcgtcagtcgcagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcaatactggctctaccagctc
aacagggaggtggatgagctggagcagtggatcgctcagagggaggtggtcgccagctcg
ccggaactgggtcaagactacgagcatgtcaccgtcctgcaggagaagttcacagagttc
gcaacagagacgggcagcgtggggcaggagcgggtgacggccgtcaaccagatggtggac
gagctcatcgactacggccactcggaggccgccaccatcgccgagtggaaggacggggtg
aacgaggcctgggccgacctgctggagctcatggagacccgggcgcagatgctcgccgcc
tcacaccagctgcacaagttcttctctgactgcagagaggcgttggcccagatcgaggac
aagcaccgacggctaccagaggttcgggctcgtcagggcagcactgccaacaccagcacc
ctgcagagactcctgcagagtttcgaacaggacattcagctgctggtcacgcaggtgcgt
cagctgcaggagagcgcggcccagctcaggacggtctatgccggcgagaaggctgaagcc
atcgcgtgtcgcgagcatgaggtgatgcagttgtggaaagagctgctgacgtcctgcgag
gagtgtcgagtgcagatcaccaccgagacggacaagctgaggttcttcagcatggtccga
gatcagatcatgtggatggaatcgatcatctgtcagatagggacaggagagaagcccagg
gacgtgtcctcagtggaggtgctgatgaattaccaccagagtctgcagagcgaagtggag
gctcgcacccggagcaccctggagtgtatcgagatgggcaaaactctgctggctgctcga
aacccagcagctgaagagatcaaggagaggctgcacaaggtggttgctaagcaatatgag
ctgtctgagaagtgggacaagcactgggacttcctgcagcaattgttggaagttcaccag
tttgcccaggaggcagtggtggcggaggcgtggctgaccgctcaggagccgctcatcagc
agcaacgagcttggcgcgagtgtagacgaggtggagcagctgattcgtcgacacgaagcc
ttccgcaaagcagccgccacctgggaggagcgattcagctcactgcggcgactcaccacg
gtagaaaagttgaaagctgagcaaagcaaactaccaccgacccctctgctgggtcgtaaa
gtcttcctagacccccaagatgccttacccaatgcgtccaccctcccccgtctcccgatc
tcccccgtcatgagacagaccatctatgagcagaacgaagccaactctcctccctcgccc
tcgcttgccacgcccacaccctctcccttgtccgtggctcgtcggctggggtcgacggtc
gccaactatacccctgtgatgaacggctccagctaccgccccacgctggaggcacggcac
agcgtcgtcgtgggcgtggccgctgggctgggccagcctgcttcctcctcgatcgcctcg
gttgccacagcggccttgctggtttcggccaaccaggcgcgagaaattgctggcacgaca
agagaccaagcaaccaaggcgatgagtcacctccatccagcacaggcggcaaggacactg
gaggccaaatcgtccccgtatctgcggcaagccaaaatcaaacacatggacgatgcggtg
acgccgctgatcgtggccagtcggctggagaaagcgagggagagggagagagacatgatg
gtggaagaaattgggacagagagagtggaggtggctgtgatggccgaggtcgtgctccag
gagccgagcagggagcgcctgcacagcgaacccaccagagggccgcaagggtccaggacc
gtcctgctgggccgggccgagccccaggtccagacccacggccaccatggggaccacagg
atagagcggcagctttccagcgagcagctgatccaggcacgcagggacgagctgcctcag
gagctgtggagggaacaggcagagaggcgggagaagcggacgctggagaggcaaacctca
agcgagcatgaaggccacgggggccatgagggccggcggagggagagggaccgacaccgt
ctggaaaaacaggaatccagtgagcatgacaccgggaaagagcactcagacagacgctca
ggaggaggagaaaaaagatccaccatggcagaaattgtagagcagctgcaagaaagggaa
gcagcacaggcccgtggtgaggtgccccgactgcccaatggggtaccggagaagccttcc
cgtctcgaccgaccccgagcacgggacaggcccaaaccacggcgccggccgcgacccaaa
gaggcgggggagactacgcggcggtccaggtccgctccagcccagagcagcccggcggtg
cctcagccgccaacacacaccgcacaccacgagggcttccttttccgcaagctggacatc
gagaccctgaagaagagcacaaatagcaggtcatgggtcaacctgtactgcgtgctcaac
aaaggggagatgggcttctacaaggatgccaagaacaccgcgacgccctacaacagcgag
ccgctgctcaacctctcccactgccactgcgacgtcaccaacggctacaagaagaagaag
aacgtcttcacgctcaaaacgaaggacggcagtgagttcttgtttcacgcaaaagatgag
gacgacctgaaggtgtgggtgaccaacatcaccgccagcatcacagagcatgaggagatc
tttaaatggggtcagccccaaccaactacctcatccaccgacgagggcacgcggcgcgac
ggcagcaaggcggacaacaggtcagagcggggcggcgagcgctcggactgcggcgagcgg
atcgagcgggcggagatggagacggagaaggagaaggagaggggcgagcgttcggagagg
tcggaccggggagggaagttggacgcaaagcgttcggaaaagtccggtaagaaaaagtga
DBGET
integrated database retrieval system
