Cyclopterus lumpus (lumpfish): 117741308
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Entry
117741308 CDS
T09199
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117741308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117741308
Membrane trafficking [BR:
clum04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117741308
Endosome - Golgi transport
Arf GTPase associated proteins
117741308
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117741308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
SAM_1
RA
SAM_2
PH_11
PH_6
PH_8
PH_3
PH_9
Motif
Other DBs
NCBI-GeneID:
117741308
NCBI-ProteinID:
XP_034404154
Ensembl:
ENSCLMG00005012543
LinkDB
All DBs
Position
13:complement(927945..974195)
Genome browser
AA seq
1627 aa
AA seq
DB search
MSQSEVEPCLTVWDWLCVLRLEQYSEAFRSAGLATLRQCRNLTPDQLERMGITLPGHQRR
ILASLNKTHSNSDTQTDTHLVQPERDQRLEETGHAKVLQRDRPVLIPVEEKPVLKEREKR
DGETLRPLPREREKPVPRERQVPGMKEDSGEGGEKKTVPGQRQMETREGKEEERDGEREK
PVPKERTRFRSSASVDCEPSPLVLTTSDAPLPPVPPRSIPNCPPQRFTSPLSPSPSAQTP
ASPKLDRHADKAPPVHSRSQCSTSTSTSTPTHTPTHAPLHPPNLLSAQTRPQALDIQPPV
HHLGSDGGGITASVSPTASHNNDINAPPLPPKAGAVPKGPPPIPHRSSPTKTVTDEMLKD
QTPQVPPRIRTPQTLEDARQSNQLDTQPALPARRVSQPPSVSRLDSLDDCSDDYEEPELC
YPGTHRINVPDRDMSLQVPVQAKGQYSSLYSDDELLDDDDASPWVDEGMGILQESFYLPK
SGRLTSTTKDDSSQLAAVIKMGWLDKNPPQGALYYQRRWVKLDVDYLRYFDNDKEVYSKG
IISTAFVTNVTSVGELKFEVVTNNRTFIFRAESEVDRKNWVTVLQDCTRGCHLRSTTNPG
STLSRDFQGYLELRGLRSKLYTVVASDKVFLYKNIEDYRLGVGITSIEMNVGNVKDTDRR
GFDLTTPYRIFSFIAESEQLREQWVDAMRDAIDEALSNSEVAQQIWAEPSNSLCADCEAP
QPEWAAINLCVVVCKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFLLLGNKRVNSF
WAANVPPSEALTPLSCSEERRRFITNKYRQGKYRKYHPLYGNQRELNHALCINVQCSDVL
ETLSLVFCGANVNCSTGMASWPTALSLANAHSQLLQAELISHNLNTELPRSEVIESMEPR
HYSAPPCVSHNGFLFKTASMARAITERKAKEEFSRRWCTVNDGTFSYYESDKNSNPNGAL
KASEIVCLAVDAPERHGYEHTFELYSESERLYLFGTDDPDSHKEWVKSIAKSFIPASAEP
LLQLAFERIGRLKCKDGLNLQTSKVGWFALVGSTLHAHLEDSQEEEIHLRKLNELSIQQD
NEVLVLVERGRTLYIEGERKLDFSGWCGAIQAAAGSGGDTLSQQQLTETDIPVIVHSCIG
YITQCGLASEGIYRKSGVNSRVKALCDRFRQDARSLHLREGEHQVDDVTTMLKRFFRELD
EGLFTSEDASSWLSAAAIQDISKKISQFQLLLNRLPCVNKATLQALINHLYCVQRFSELN
QMNLHNLAIVFGPTLFQSDGKDVNASRAIEDLIQHYTFIFEVDEQQLQKQLKEITVIIKV
REKLNTKFPSTEPGGHFICTVYLEEKKDTAEQHVKIPGSMTAAELTCEILDRRNIQVKGK
EYWNCWEVSDKEEMERPLHYQERVLPILHSIGTDSHLLIKKHLAMEAMMVYLASKVDASK
HGMMKFGEERSILGLGRSSGIFHDRYFILNSDSLRMYKEVRSNCPERDWPVKNLKVYMGI
KKKVRPPTCWGLTVVYESKKQEKQKRQQCFAAGGKNGSGPCVSVWRRRGVKGRFHPGGKH
VYTCESVGISTVVLGVLFSSRRRQHHFLVTLHHHVGHSKKTHTREEETERGKGCGRKIKK
SGGESGK
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtctgaagttgaaccctgtttaactgtgtgggactggttatgtgttcttcgc
ctggagcaatattccgaggcatttaggagtgccgggctggcaacgttacgacaatgtcgc
aacctcacacctgatcaattagagcggatgggcatcaccctgccgggtcaccagagacgc
atcctggctagcctgaacaaaacacatagtaacagtgacacacagaccgacactcacctt
gtacagcctgagagagatcagcgattggaggaaacgggacatgccaaagtgttgcagaga
gatagacctgtgcttatcccagtggaagaaaaacctgtccttaaggaaagggagaaaaga
gatggggagacattgcgacctttgcccagggaaagagagaaaccagtgcccagggagaga
caagtgcccgggatgaaagaggacagtggagaaggaggagagaagaagacagttcctgga
cagagacaaatggaaactagagaaggaaaagaggaagagagggatggagagagggagaag
cctgtgcccaaagaaaggactaggtttcgctctagtgcttcagtggactgtgagcccagc
ccacttgtccttacaacttctgacgcccctttaccccctgtccctccacgaagcatcccc
aactgtcctccacagcgcttcacctctcccctcagcccctcaccttctgcacaaacccct
gcctcccccaaactggacagacatgcggataaagccccacctgtacatagcagatcccag
tgttccacctcgacctccaccagcaccccgacccatacccccacacatgcacctctccac
cctcccaacctcctctctgctcaaactcggcctcaggcattagatattcagccacctgtc
catcatttgggtagtgatggaggaggaataactgcatccgtctcccccactgcttcccac
aacaatgacataaatgctccacctctcccaccaaaagcaggggcggtacctaaaggccct
ccaccaatcccacaccgctcctctcctaccaagacggttactgatgagatgcttaaagac
caaactccacaggtccctcctcgcatccggacaccccaaactctagaagacgctcgtcag
tcaaatcaactggacactcagcctgccctgcctgctaggagagtatctcaacctcccagt
gtgtccaggttggattcactcgatgattgttctgatgactacgaggaaccagaattgtgt
tatcccggtactcatcgaataaacgtaccagacagggatatgtccctgcaagtacctgtc
caggcaaaaggacagtacagttctttgtacagtgatgatgagctgttggatgatgatgat
gccagtccatgggtggacgagggcatgggcattctgcaagaaagtttctacctgccaaag
agtggcagactgacatcaaccactaaagacgacagctctcagcttgctgctgtcattaag
atgggctggctggataagaatccacctcagggggccctttattatcagcgacgttgggtg
aagctggatgttgactatctgagatactttgacaatgacaaggaggtgtattctaagggg
atcatctctactgccttcgtcactaatgtgaccagtgtgggagagctgaagtttgaggtc
gtcacaaacaaccgaacatttatcttcagggcggaaagtgaagtcgatagaaaaaactgg
gtgactgtactgcaggactgcaccagggggtgccatctgcgcagcaccacaaaccctggc
tcaacgttgtcccgggactttcagggatatctggagctcagagggttacgctccaaactt
tataccgttgtagcctcagataaagtgttcctttacaaaaacattgaggactatcgttta
ggagtgggtatcacatctattgagatgaatgtaggaaatgttaaagacacagatcgtcgt
ggctttgatctcactacgccttaccggatattcagcttcatcgcagaatcagagcagcta
cgagagcagtgggtggacgccatgcgggatgcgatagatgaggcactgtcgaatagcgag
gtcgcacagcagatctgggcggagcccagtaacagtctttgtgccgactgtgaggctccc
cagccggaatgggctgccatcaacttgtgcgtggtggtctgcaagcgatgcgcaggcgag
cacagaggactgggacctagcatctccaaggttcgtagtctgaagatggacaggaaagtc
tggacagaggagctgatacaggtgtttctgttgctgggcaacaaacgggtaaacagcttt
tgggcagctaacgtaccgccaagtgaagctttgacacccttgagctgcagtgaagagagg
cggcgattcatcaccaacaaataccgccagggcaaatacagaaagtaccaccctctgtac
ggaaaccagagagagctcaaccatgctctttgtataaatgtgcagtgcagcgatgtgctg
gaaacgttaagcctagttttctgcggtgcaaatgtgaattgttcaactggtatggcaagt
tggcccactgctctctccctggccaacgcacactcgcaactcttacaggctgagttaata
agtcacaatctcaacacagagctcccgcggtcagaagtgattgaaagcatggagccgcgc
cattactcagcaccaccttgtgtgtctcacaatggcttcctgttcaagactgcatccatg
gctcgggctattacagagcgcaaggccaaagaggagttcagtcgtcgttggtgcactgtg
aacgatggcaccttcagctactatgagagcgacaaaaactcaaaccctaacggtgctttg
aaggcttcagagatcgtctgcttggctgttgacgcgcctgagagacacgggtatgagcac
acctttgaactttactcagagtcagagcgtctctatctgtttggcactgatgacccagac
agccacaaggaatgggtcaagtctattgccaagagctttatcccggccagtgcagagccg
ctactgcagttggcttttgagcggattgggcggctgaaatgtaaagacggcttgaaccta
caaacatccaaggttggctggtttgctctggtgggctccacacttcacgctcacctggag
gacagccaggaagaggagatccacctccgcaaactgaatgaactctcgattcaacaagac
aacgaggtgctggttctggtggagagaggcagaactctgtacatagagggagagaggaag
ttggatttttccggctggtgtggcgccatccaggcggcagcggggagtggaggagacaca
ctgagccagcagcagctgacagagacagacatacccgtcatagtacatagctgcatcggc
tacatcacgcagtgcgggttagcctctgaggggatatatcgtaagagcggtgtgaactcc
cgcgtgaaagcgctgtgtgatagattccgtcaggatgctcgcagtctccatctgagagaa
ggagagcaccaggtggacgacgtcaccaccatgctcaaacgcttcttcagggagttggat
gaaggactgttcacatcagaggatgccagctcctggctcagtgctgctgctattcaggat
ataagcaagaaaatctcccagttccagctgctgttgaacagactgccttgtgtcaacaag
gctacactacaagcccttatcaaccacctctattgcgtgcagcgtttttctgagctgaac
cagatgaacctccataacctggctatagtattcggtcccacactgttccagagcgatggg
aaggacgtaaatgctagccgcgcaatagaggacctcatacagcactacacgttcatcttt
gaggtggatgaacagcagctacagaagcagctgaaagagatcactgttatcatcaaagtg
cgagagaaactcaatacaaagtttcccagtactgaacctggagggcacttcatctgtaca
gtgtacctggaggaaaagaaggacacagcagagcaacatgtcaagatccctggttctatg
acggcagcagagctgacctgtgagatcctggaccggcgtaacatccaggttaaaggcaaa
gagtactggaactgctgggaggtcagcgacaaggaggaaatggaacgtccactgcactat
caggagcgagtcttacccatcctgcactccattggcaccgactcccatctgctcatcaag
aaacacctcgctatggaggcgatgatggtctacctggccagtaaagtggatgcatccaaa
cacgggatgatgaaattcggagaagagcgaagcatcttgggattgggacgctcctctgga
attttccacgaccgatatttcatcctcaattccgactctctcagaatgtacaaggaagtc
agaagtaactgtccagaacgtgattggccagtgaaaaacctaaaggtctacatgggtatt
aaaaagaaagtccgtcctcctacatgttggggactgacagtcgtgtatgagagtaagaaa
caagagaagcaaaagagacagcagtgtttcgctgcaggtggtaaaaacggatcaggtccc
tgcgtgagtgtttggagaaggaggggtgtgaaaggtcggttccacccaggagggaaacac
gtgtacacctgtgagtcggtgggaatcagcaccgttgtactgggagtgctgttctcgtct
cgccgtaggcagcatcatttcttggtcacgctccatcaccatgttggtcacagcaaaaaa
acacacaccagagaggaagaaacggagagagggaaggggtgtggaagaaagataaagaag
tcagggggagaaagtggaaagtag
DBGET
integrated database retrieval system
