Cyclopterus lumpus (lumpfish): 117741321
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Entry
117741321 CDS
T09199
Symbol
sars2
Name
(RefSeq) serine--tRNA ligase, mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117741321 (sars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117741321 (sars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117741321 (sars2)
Enzymes [BR:
clum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
117741321 (sars2)
Amino acid related enzymes [BR:
clum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117741321 (sars2)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117741321 (sars2)
Prokaryotic type
117741321 (sars2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
2H-SAK
MglC_N
Motif
Other DBs
NCBI-GeneID:
117741321
NCBI-ProteinID:
XP_034404176
Ensembl:
ENSCLMG00005007230
UniProt:
A0A8C2X8W3
LinkDB
All DBs
Position
13
Genome browser
AA seq
521 aa
AA seq
DB search
MATRIGMVARYGVPALTALKPVARRCSRQRARVYVPSRSSHGARSSLYEHVSEGYSDKPE
LDMRAVCEETDKVIANVENRKGDLRGDDVRRIVCVWQELQAVRTEISGLEEQKRHISNTV
KALVAKNDKKALGDLPEYARALQRGREIRSRLNELHPKETELDQEHYGRALRLPNTSHPD
VPVGDESQARVVELVGQKPDFDFKPRGHVELGEELGLIRQRHLAHVSGHRSYYLRGAGAR
LQTALQNFALDTLQRRGFVPMVVPDMLKGAVFEGCGMQPNAHRSQVYSLDQARFPDLNLA
GTGEVGVAGYFMDHAVSWKDLPARTVCSSTCYRAETDTGRETWGLYRVHHFNKVEMFGVT
ADETGEESARLLQEFISLQKEMFSALELHYRVLDMPTQELGPPAHRKYDIEAWMPGRDGY
GEISSGSNCTDYQSRRLNILYEREDGGLQYAHTVNATACAVPRTIIAILETHQTKEGTVR
VPRALRPYLGLEVIEAPKYSPLKYIGPNQHSRPPRPAPKTR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgcatcggcatggtcgcgagatacggagtccctgcgcttactgccctaaag
ccggtggccagacgatgctcgaggcagcgggcgcgcgtgtacgtccccagccgctcgtcg
cacggagcccggagcagtttgtacgagcacgtcagcgaaggttacagcgacaagcccgag
ctggacatgagggcggtgtgcgaggagaccgacaaagtcatcgcgaacgtggagaacagg
aagggcgacctgcgaggggacgatgtcaggaggattgtgtgtgtgtggcaggagctccag
gcagtgaggaccgagatctctggactggaggagcagaagagacacatcagtaacacagtc
aaagcactagtggccaagaatgacaagaaagccctcggtgatctcccggagtacgctcgg
gctctgcagcgcggccgcgagatccgcagcaggctgaatgaactccaccccaaagagacg
gagctggatcaggagcactacggacgagcactccgactgcccaacacctcgcaccctgat
gtgccagtgggggatgagagccaggcgagggtggtggagctggtgggacaaaagccagac
tttgacttcaagcccagaggccacgtggagttgggagaggagttgggtctcatcaggcag
cggcatctcgctcatgtctcaggccacaggtcctactatctgaggggggccggggccaga
ctccagaccgccctccagaactttgccctggacacactgcagcgacggggcttcgttccc
atggtggtgcccgacatgctgaagggggcagtgtttgagggttgtgggatgcagcccaac
gcccatcgctctcaggtctactccctggaccaggcccgcttcccagacctcaacctggcg
gggaccggagaggtcggagtggcaggctatttcatggatcatgcagtcagctggaaggac
ctgcctgccaggacggtgtgcagcagcacctgctacagagcagagacggacacgggcaga
gagacatggggcctctacagagtgcaccacttcaacaaggtagagatgtttggggtgacg
gcggatgagacgggagaggaaagcgctcggctgctgcaggagtttatctctttgcagaaa
gagatgttctctgcactggaactacactacagagtgctggacatgccgactcaggaactg
ggtcctccagcacacaggaagtatgacattgaagcctggatgcccgggagggacggctac
ggagagatttccagtgggtccaactgtaccgactaccagagcagacgcctcaacatcctg
tacgagcgggaggacggcggcctgcagtacgcccacacggtgaacgccacagcatgtgcc
gtccccagaaccatcatcgcgatcctggagactcaccagaccaaagaaggaacggtgcgt
gtcccccgagccctgcggccttatttgggcctcgaggtcatcgaggccccaaagtactcg
ccgctgaaatacatcggacccaaccagcacagtcgaccaccgcggcccgcccccaaaacc
agatga
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