KEGG   Cyclopterus lumpus (lumpfish): 117741325
Entry
117741325         CDS       T09199                                 
Symbol
cldnf
Name
(RefSeq) claudin f
  KO
K06087  claudin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03272  Virion - Hepatitis viruses
clum04382  Cornified envelope formation
clum04514  Cell adhesion molecules
clum04530  Tight junction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    117741325 (cldnf)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117741325 (cldnf)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117741325 (cldnf)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    117741325 (cldnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:clum03037]
    117741325 (cldnf)
   04147 Exosome [BR:clum04147]
    117741325 (cldnf)
   04515 Cell adhesion molecules [BR:clum04515]
    117741325 (cldnf)
Cilium and associated proteins [BR:clum03037]
 Other cilia and associated proteins
  Stereociliary proteins
   117741325 (cldnf)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   117741325 (cldnf)
  Exosomal proteins of colorectal cancer cells
   117741325 (cldnf)
Cell adhesion molecules [BR:clum04515]
 Immunoglobulin superfamily
  L1 family
   117741325 (cldnf)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Amastin MFS_MOT1
Other DBs
NCBI-GeneID: 117741325
NCBI-ProteinID: XP_034404184
Ensembl: ENSCLMG00005011850
UniProt: A0A8C2Z9H1
LinkDB
Position
13:12556132..12557254
AA seq 251 aa
MGRIGKEVAGQVISFIGLVGVAVTCGIPMWRVTTFIGANIVTGQNIWDGLWMKCVMQSTG
QMQCTLNDSVMSLSSDLQAGRALVIISLIFGFIGFIITFIGAKCTSCLDKDSSKAKVVII
GGCLIIVSAVLILIPVCWSAAITIADFQNPLIISSQKRELGASIYIGWASAAILLIGGIT
LTTSCPPQKDMYGYPGYPPAPMYPYAGPGINPAAYGPVYAPASSQPYTGTGTYISSKPYA
VPTAYSARQYL
NT seq 756 nt   +upstreamnt  +downstreamnt
atggggaggattggcaaggaggtggcaggtcaggtcataagcttcataggcctggttggg
gttgcggtgacctgtgggatccccatgtggagagtgaccaccttcattggagccaacatc
gtgacgggccagaacatttgggacggcctgtggatgaaatgcgtaatgcagagcaccggg
cagatgcagtgcacgctgaacgactctgtaatgagtctgtccagcgacctgcaagccggc
cgagccctggtcattatctccctcatcttcggcttcatcggcttcataatcaccttcatc
ggagccaagtgcaccagctgcctggacaaggattcctcaaaggccaaggtggtgatcata
ggcggctgtctcatcattgtttccgccgtcctcatcctgatccccgtctgctggtccgcg
gccatcaccatcgcagacttccagaaccccttgatcattagttcacagaagagggagctt
ggagcgtccatctacattggctgggcatctgctgctattcttctgatcggcgggatcacc
cttaccacgtcctgccctcctcagaaggacatgtatggatacccaggctacccaccagca
ccgatgtacccttacgcaggcccagggataaacccagcagcgtatggcccagtgtatgcg
cccgcttccagccaaccgtacacaggtactgggacatacatatctagcaaaccgtatgca
gtaccaaccgcatactctgccagacaatacctctaa

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