Cyclopterus lumpus (lumpfish): 117741338
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Entry
117741338 CDS
T09199
Symbol
pld3
Name
(RefSeq) 5'-3' exonuclease PLD3
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00564
Glycerophospholipid metabolism
clum00565
Ether lipid metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117741338 (pld3)
00565 Ether lipid metabolism
117741338 (pld3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117741338 (pld3)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
117741338 (pld3)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117741338 (pld3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
117741338
NCBI-ProteinID:
XP_034404210
Ensembl:
ENSCLMG00005014037
LinkDB
All DBs
Position
13:13028889..13035494
Genome browser
AA seq
483 aa
AA seq
DB search
MKTDVAYNQLVDMERRQEANRKAQINCRCAIALVTVAVVLLAATALYIVLTLRVSSSHPA
PSSSLHPPRRESCSDPCKIVLVESIPEGLEFNSSTTHPTIFKAWLNLMGEARSSIDIASF
YWSLTNKDTGTHEPTANQGETILNTLADLSGKLSVRIAVNTPQGSQPQGDLRLLNNSGAD
IRTVNMKELTSGVLHTKFWVVDKKHIYIGSANMDWRSLTQVKELGAVVYNCSCLAADLGK
IFEAYWLLGDSESIPSPWPSSFATLYNKDTPLQLPLNSTPSSVYLSSSPPSFCAAGRTPD
LQSILSVMEDAESFIYIAVMNYLPTMEFSHPKRYWADIDTQLRRVGYEKRVKVRLLISCW
ASTKPVMFSFLKSLASVYDPKSGLDIQVRLFVVPASPKQKEIPFARVNHNKYMVTDKIAY
IGTSNWSGDYFVSTAGSALVVNQTASVSPEPTVQSQLRAVFERDWDSNYSTPVAQHFNHK
HLC
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggacgtcgcttacaaccagctggtggacatggaaaggaggcaagaggccaac
cggaaagcacagataaactgcaggtgcgcgatagctctggtcactgtggctgttgtgctg
ctggccgccacggccctctatatcgtcctgacactgagggtttcctcctcccatccggcc
cccagcagcagcctccatcccccccggcgagagtcctgctcagacccctgcaagatcgtt
ttggtggagagcatccctgaaggtctggagtttaactccagcaccactcaccccaccatc
ttcaaggcctggctcaatctgatgggcgaggcccgcagcagtatcgacatcgcctccttc
tattggtcgctcactaataaagacaccggcactcacgagccaacagccaatcagggtgag
accattctgaacacactggctgacctctccgggaagctgtctgttcggattgcagtgaac
acaccacaggggagtcaaccgcaaggggacctcagactgctcaacaactcaggagctgat
atcaggacagttaacatgaaagagctcacctcaggagtcctccacacaaagttctgggtc
gtggacaagaaacacatttacatcggcagtgccaacatggactggagatccctcacacag
gtgaaggagctcggcgcggtggtctacaactgcagctgtttggcagcggacctgggtaag
atcttcgaagcctattggctcctgggagacagtgagtcgattccgtcgccttggccgagc
agcttcgccaccctctacaacaaggacacgcccctccagctgccgctcaacagcacgccg
tccagtgtctacctgtcgagttcccctccgtccttctgtgcagccggcaggacgccagac
cttcagtccatcctcagcgtgatggaggacgccgagagcttcatctacatcgctgtcatg
aactaccttcccaccatggagttctcccatcctaaaaggtactgggctgacatcgacacc
cagttgaggcgagtcgggtacgagaagcgggtcaaggtgcgcctgctgatcagctgctgg
gccagcaccaaaccggtcatgttttccttcctgaagtctctggcctccgtgtacgacccc
aagagcgggctggacatccaggtgaggctgtttgtggtgccggccagccccaagcagaag
gagattccctttgcccgagtcaaccacaacaagtacatggtgaccgataagatagcctac
ataggtacgtctaactggtctggtgactactttgtgagcacggctggctcggcgctggtt
gtcaaccagactgcgtcggtgtccccggagccgaccgtccaatcgcagctgagggccgtg
ttcgagagggactgggactccaactacagcacccctgtcgcccagcacttcaaccacaag
cacttgtgttag
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