Cyclopterus lumpus (lumpfish): 117741340
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Entry
117741340 CDS
T09199
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1-like isoform X1
KO
K17477
FERM, RhoGEF and pleckstrin domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117741340
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117741340
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FA
FERM_N
SOS1_NGEF_PH
RHG20_PH
IQ_SEC7_PH
PH_13
PH_20
Motif
Other DBs
NCBI-GeneID:
117741340
NCBI-ProteinID:
XP_034404219
Ensembl:
ENSCLMG00005005518
LinkDB
All DBs
Position
2:complement(11915945..11942202)
Genome browser
AA seq
992 aa
AA seq
DB search
MFNVIPFLLLFTPFLMFNVIPFPLLSQQRSPGKVLFDLVCVHLNLAEGDYFGLEYQDQRK
MTVWLDLLKPTLKQIRRPKNTILRFVVKFFPPDHTQLLEELTRYLFALQIKRDLACGRLI
CNDTSAALMVSHIIQSEIGDFDETQSWQHLLHNKYLPDQDAIRDKITDCHRKHVGQTPAE
SDYQLLEIARRLEMYGVRLHPAKDREGTKLSLAVAHIGVLVFQGYTKINAFNWSKVRKLS
FKRKRFLIKLRADPAQSAHHDTLEFAMASRDCCKVFWKICVEYHAFFRLFEEPKPKPKPI
LFTRGSSFRFSGRTQKQIIDYVKDSELKKLPFERKHSKILSHSGMPPQSSSFRSQVPKES
AMSVQPADQPDSTRLGHRAESNGSEEPPASTSTANGFHDAAPGSDPIPSRQNHHRTGSAP
DPHFLNPESPGSEDSPAGSPRVVINGAGDPGPSPEGRHLPPLTSPLLTDAGCVRNDDEEE
ARRKKFPTDKAYFIAKELLTTERTYLNDLQVITQAFHGAAGKDEAFPDSVKNLISASYDP
VHRFHQDFLKEVEQRLAQWEGRSNAHIKGDYQRIGDILLKNIQGLRQLTVHLQKHSECLV
ELERVCRSSRKAEAVCRDFEQQRVCYLPLNIFLLRPLHRLLHYKLILERLCKHYPPTHED
FRDCRATLADISEMVLQLQGTMMKMENFQKLLELKKDLTGIDNLAIPGREFIRLGCLSKL
SGKGLQQRMFFLFSDSLVYTSRGMTPSNQFKVHGQLPLYGMTIRESEEEWGVPHSFTLFG
PRQSVVVAASCASEMERWVEDIRMAIDLAEQSSSPDADLLPTGLSDHKLSEDGGAELESE
EELCGSRSSLERQGHRGNTTVHVCWHRNTSVSMVDFSVAVENQLSGNLLRKFKNSNGWQK
LWVVFTNFSLFFYKSHQDDYPLASLPLLGYSVTVPAESENIHKDYVFKLHFKSHVYYFRS
ESEYAFERWMEVIRSATCSASRPAPSTRKELY
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgtgattccctttctcctcctttttactccttttttaatgttcaatgtgatt
cccttccccctcctctcgcagcaacgctcccccggcaaagtgctgtttgacctggtctgt
gtgcatctcaacctggcagagggagactactttggactggagtaccaggaccagcgcaag
atgacggtgtggctggacctgctgaagccgacgctgaaacagatccgacggcctaagaac
accatccttcgcttcgtggtgaagttcttccctccggaccacacgcagctgctggaggag
ctgactcggtatctgttcgccctgcagataaaacgtgacctggcctgcggtcgcctcatc
tgcaacgacaccagcgccgctctcatggtgtcccacatcattcagtccgagatcggagat
tttgacgagactcagagctggcagcatctcctccacaataagtacctgccggaccaggac
gccatcagagacaagatcaccgactgccaccgcaagcatgtcgggcagactccggcagag
tccgactaccagctgctggaaatcgcccggcggttggagatgtacggcgtccgtctgcac
ccggccaaggaccgagagggcaccaagctcagcctggctgtggcgcacatcggcgtgctg
gtgtttcaggggtacacaaagatcaacgccttcaactggtccaaggttcgcaagctcagc
ttcaaacggaaaaggttcctgatcaagctgcgagccgaccccgcacagagtgcccaccac
gacacgctggagttcgccatggccagcagggattgctgtaaggtcttctggaagatctgc
gtcgagtaccacgccttcttcaggctcttcgaggagcccaagcccaaacccaaacccatc
ctcttcaccagagggtcctcattccggttcagcggtcgaacccagaagcagatcatcgac
tacgtgaaagactcggagctcaagaagctcccatttgaaaggaagcacagtaagatcctg
tcccacagcggcatgccgcctcagtcttcgtccttcagatcacaagtgccaaaagagagc
gccatgtctgtgcagccagcagaccagccggactcgaccaggctgggccatcgagctgaa
tccaacggctcagaggagccgccggcatccacgtcgaccgccaacggcttccacgatgcg
gcgcccggctcggacccgattccgtcccgacagaaccaccaccgcaccggatcggcgccg
gacccgcacttcctcaacccagaaagccccggttcggaggactctccggctggaagtccc
cgcgtggtcatcaacggcgccggcgacccgggtccgagtcccgagggtcggcatctaccg
cctctcaccagcccgctgctcaccgacgccggatgcgtccgcaacgatgacgaagaagag
gcgaggaggaagaagtttcccacagacaaggcgtacttcatcgccaaggagctgctgacc
acagagcggacctacctcaacgacctgcaggtcatcacacaggccttccacggcgccgcg
gggaaggacgaggccttcccggactccgtgaagaacctgatctccgccagctacgacccg
gtccacaggttccaccaggacttcctcaaagaggtggagcagcggctggctcagtgggag
gggcgctctaatgcccacattaagggagactatcaacgcatcggggacatcctcctgaag
aacattcagggtctgaggcagctgacggttcatctccagaagcattccgagtgcctggtc
gagctggaacgggtctgcaggtccagtcggaaggccgaggccgtgtgccgagacttcgag
cagcagagggtttgctacctgccgctcaacatcttcctcctgcgtcctctccaccgcctg
ctgcactacaagctcatcctggagaggctctgcaagcactacccgcccacccacgaggac
ttcagggactgcagagcgaccctggcggacatctccgagatggtgctgcagctgcaaggc
accatgatgaagatggagaacttccagaagcttctcgagctgaagaaagatctgaccggc
atcgacaacctggccatccccgggagggagttcatccggctcggttgcctcagcaagctc
tcagggaagggccttcagcagaggatgttcttcctgttcagcgactcgctggtgtacacc
agtcgaggaatgaccccgtccaaccagttcaaagttcacggccagctgcccttgtacggc
atgacgatcagagaaagtgaggaggagtggggggtccctcactccttcaccttgtttgga
ccacgccagtctgtggtggtggcagccagctgtgcgtcagagatggagcgctgggtggag
gacatcaggatggccatcgacctggcggagcagagcagcagcccggacgccgacctgctg
cccaccggcttgtctgaccacaagctgtcggaggacggtggagccgagctggagtcggag
gaggagctctgtggctcgcgctcgtctctggagcgccagggtcaccgcggcaacaccacc
gtgcacgtctgctggcaccgcaacaccagcgtgtccatggtggacttcagtgtcgccgtg
gagaaccagctgtcgggcaacctgctgaggaagtttaagaacagtaacggctggcagaag
ctctgggtggtcttcaccaacttcagcctgttcttctacaagtcccaccaggacgactac
cctctggccagcctccccctgctgggctactccgtcaccgtgccggccgagtccgagaac
atccacaaggactacgtcttcaagctccacttcaaatcccacgtctactacttccgctcg
gagagcgagtacgccttcgaaaggtggatggaggtgatccgcagcgccacctgctcggcc
agccgccccgcgccgagcaccaggaaggagctttactga
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