Cyclopterus lumpus (lumpfish): 117741352
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Entry
117741352 CDS
T09199
Name
(RefSeq) C-X-C chemokine receptor type 5
KO
K04190
C-X-C chemokine receptor type 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117741352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clum04030
]
117741352
04050 Cytokine receptors [BR:
clum04050
]
117741352
04090 CD molecules [BR:
clum04090
]
117741352
G protein-coupled receptors [BR:
clum04030
]
Rhodopsin family
Chemokine
CXC Chemokine
117741352
Cytokine receptors [BR:
clum04050
]
Chemokine receptors
CXC Chemokine
117741352
CD molecules [BR:
clum04090
]
Proteins
117741352
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
117741352
NCBI-ProteinID:
XP_034404237
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All DBs
Position
13:11947962..11950771
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AA seq
364 aa
AA seq
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MAVTKTFIFELADTAVENSTYTYDYGNDTEPLICDEGTAMQTVHAVLQPVLYSLIFLLGV
AGNGLMVTVLLRRWRRLRITEIYLLHLAVADLMLLSTFPFDVVENAAGWLFGDFLCKLTG
LVHNLNLHCGSFLLACIGFDRYLAIVHAIPSMQSRRPRTVHLTCATLWLVCLGLSIPNAA
FLSVSADARQISHLSCYYHDYGIYANNWVLTNIVLDHVCFFLPLAVMSYCYTAVIVTLCN
SQKRQAKQGAIRLALLLTLVFFCCWLPYNITLLIKTMVDMEVISYETCEPYVRLQPTVDV
TKSLGLSHCCLNPFLYAFVGVRFRNELLQLLCKLGCSHVCLPFIRAQGHSRISTSDGATS
TMFI
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaacaaaaaccttcatctttgagctggcagacacagcggtggagaattcaaca
tatacatacgattatggaaacgacacagaacctttaatctgtgatgagggtactgccatg
cagactgtgcatgccgttttgcaacctgtgctgtacagcttgatctttctgctgggtgtg
gcagggaatggcctgatggtaaccgttctcctgagacgttggcgccgcctgcgcataact
gagatctacctgctgcacctcgccgtggctgacctcatgctcctttccacatttcctttt
gatgtagttgaaaatgccgccggttggctgtttggagactttctctgcaagctgacgggt
ctggtgcacaacctaaacctccactgtgggagtttccttttagcttgcattgggtttgac
cggtatttggccattgttcatgccattcccagtatgcaaagtcgacgtccgagaacagtg
cacctaacatgcgccacgttgtggctggtctgtctggggttatcaatccccaatgctgcg
tttctttctgtgagtgcagatgccagacaaatatctcatctctcctgttactatcatgat
tatgggatctatgcaaacaactgggttttgacgaatatagtcttagatcacgtgtgcttt
ttcctacctctggctgtcatgagctactgttacacagcagtaatagttacattgtgcaac
agtcagaaaaggcaagcaaagcaaggagcaattagactggctttactcctcactcttgtc
tttttctgctgttggctgccatataatatcaccttattgatcaaaactatggtagacatg
gaggtcatctcatatgaaacctgtgaaccttatgtccgactgcaaccaaccgttgatgtg
acgaaaagccttggtctctcacactgttgcctgaaccctttcttgtacgcctttgttggg
gtgcgctttcgcaatgagctattacagttactttgtaaattgggctgcagccatgtttgc
ctcccttttatccgagctcagggtcacagtcgaatatccacttctgacggcgcaaccagc
accatgttcatctaa
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