Cyclopterus lumpus (lumpfish): 117741355
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Entry
117741355 CDS
T09199
Name
(RefSeq) THAP domain-containing protein 5-like
KO
K23206
THAP domain-containing protein 5/8
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117741355
03036 Chromosome and associated proteins [BR:
clum03036
]
117741355
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2CysHis zinc factors
117741355
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Gene silencing
Transposable elements
117741355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THAP
Tim54
RNA_pol_3_Rpc31
Merozoite_SPAM
CCSAP
CDC45
DUF8167_3rd
RNA_pol_Rpc4
DDHD
Motif
Other DBs
NCBI-GeneID:
117741355
NCBI-ProteinID:
XP_034404240
Ensembl:
ENSCLMG00005011842
UniProt:
A0A8C2Z9D8
LinkDB
All DBs
Position
13:12513139..12517519
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AA seq
456 aa
AA seq
DB search
MPKYCSVPNCKNDSGNGGDRKSFYKFPLQDPVRLQQWLRNMRRGDWVPSRHQYICHEHFV
PSCFKVRWGIRYLESDAVPTVFQDAEKRKASDSSERTPKRLRATGDQSVTVSVDAAETES
ETPHTVRLYEIIVDPSQQAETSRLVASGVGGSDRFPFTLLQMVNDLSNGEEVIVMSECPA
SEGLDELLNRMPAAILTQGHVLVSEDGTGTPEEPSDAHEDGETQVIAYFKTIPNVFPGEA
AAQLSMCPDTVLSSALSSKPITSTLPIVSKRSAPSPTSLVLSAEKLDEGEEYEDSGASEE
EEEEEEEEEEEQEEEQEEEQEEEQEEEEEEEEDSGASEEEGAGAEPLDRQLDEHCYHKSS
LSKEQREAIVAELQKKVKVLQQRHRRHMEKLLGLENTVSQLRQSNLLNEERLQLLERAYI
QTSAAVSDAGRTVAIIYEQDDAAYLYTPLIAVAGKL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatattgttctgtcccaaactgcaagaatgattctggaaacggcggcgacagg
aagagcttctacaagttccccctccaggatccggtccggctgcagcagtggctgaggaac
atgcggcgcggcgactgggtcccctctcggcatcagtatatttgccacgagcattttgtg
ccttcatgcttcaaggtgcgctgggggatccgctaccttgagagcgacgccgtgcccaca
gtcttccaggacgccgagaaaaggaaagcgtcggattccagcgagaggacgccgaagcga
cttcgcgctaccggcgatcaaagcgtaacggtgtcggtcgacgccgcggagacggaaagc
gaaacaccgcacaccgtgcgcctgtacgagatcatcgtggacccgtcacagcaggcagaa
acgagccggctggtagcaagcggcgtcggggggtctgaccgattccctttcactttactc
cagatggtcaacgatctaagtaacggcgaggaggtgatcgtgatgtccgaatgccccgcc
agtgagggtctggatgagctcctgaacagaatgcccgctgcgatcttaacgcagggccac
gtgctggtgagtgaagacgggactggcaccccggaggagccctcggacgcccacgaggac
ggtgaaacccaagtcatcgcctacttcaagaccataccgaatgttttcccgggagaggcc
gccgcccagctcagcatgtgcccggatacagtgctgtcgtccgctctgagctccaagccc
atcacgtccactctgcccatagtgtccaagcgctcggcgccctccccgacgtccctggtc
ctctccgcggagaagctggacgagggagaggagtacgaggacagcggcgcgtcagaggag
gaggaggaggaggaggaggaggaggaagaggagcaggaagaggagcaggaagaggagcag
gaagaggagcaggaagaggaggaggaggaggaggaggacagcggcgcgtcggaggaggag
ggcgccggtgcagagccactggatcgccagctggatgagcactgctaccacaagagcagt
ctgagcaaggagcagcgtgaggcgatcgtggccgagctgcagaagaaggtgaaggtgctg
cagcagcgccaccgccgccacatggagaagctcctgggcctggagaacactgtgagccag
ctgaggcaaagcaacctgctgaacgaggagcgcctgcagctgctggagagggcttacata
cagaccagcgcagcggtgtcggatgccgggcggaccgtggccatcatctacgagcaggat
gatgccgcgtacttgtatacgccgctgatcgccgtcgctgggaagctgtga
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