Cyclopterus lumpus (lumpfish): 117741360
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Entry
117741360 CDS
T09199
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117741360 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117741360 (snrpa)
Spliceosome [BR:
clum03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
117741360 (snrpa)
Complex B
117741360 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
117741360
NCBI-ProteinID:
XP_034404251
Ensembl:
ENSCLMG00005016024
UniProt:
A0A8C2ZWF7
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All DBs
Position
13:complement(5397812..5400126)
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AA seq
279 aa
AA seq
DB search
MAAPDVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARNMKMKGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKIDSDIIAKMKGTFVERDRKKKEKKIKGADAGG
AKKGVPGAAVPMVAGVPSAMPGMPPMNQAPRMMHMPGQPPYMPPPGMMPPPGMAPGQMLP
GGMPGQMMPGQMHMPQQIAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGR
HDIAFVEFENEVQAGAARDALQGFKITQANAMKISFAKK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccggacgtacggctcaatcatacaatctacatcaacaatttgaatgagaaa
atcaagaaagatgagttgaaaaagtcgttgtacgccatcttctctcagtttggacagatt
ttggacatcttggtcgcacgaaacatgaagatgaagggtcaggcctttgttattttcaaa
gaggttaacagcgcttccaatgctctgagatcgatgcagggatttcctttttacgacaaa
cctatgcgtatccagtatgccaagatagactcagacatcatagctaaaatgaaggggact
tttgtggagcgtgatcgtaaaaagaaggagaagaagatcaaaggagctgatgcagggggt
gctaagaagggtgtaccaggagctgctgtccccatggttgctggggtaccttctgccatg
cctggaatgcctcccatgaaccaggctccccgtatgatgcacatgccgggccagccgcct
tatatgcctcctcctggcatgatgcctcctccagggatggcacctggtcagatgctccct
ggtggcatgcctggccagatgatgccaggacagatgcacatgccccaacaaattgcagaa
aatccccccaatcacattctcttcctcaccaacctgccagaggaaacaaacgaactcatg
ctctcaatgctcttcaaccagtttcccgggttcaaggaagtgcgtctggtccctggtcgt
cacgacatcgcctttgtggaatttgagaacgaggtgcaagccggagctgcacgagacgca
ctacaaggctttaagatcacacaagcgaacgccatgaagatctcctttgctaagaaataa
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