Cyclopterus lumpus (lumpfish): 117741375
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Entry
117741375 CDS
T09199
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117741375 (dscamb)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
DSCAM family
117741375 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
C2-set_3
fn3_2
DUF1571
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
117741375
NCBI-ProteinID:
XP_034404280
Ensembl:
ENSCLMG00005004757
LinkDB
All DBs
Position
13:14785207..14874100
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AA seq
1938 aa
AA seq
DB search
MRGSVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGQRYLITSTGALYILDVLPEDGLNNY
RCTTRHRYTGETRQSNSARLIVSDPTNAEPDILDGFDQREVMIDHRVELPCKASGYPTPK
YRWLKDNSPLEPDSRFRQTTTGLLIESTQPNDSGTYVCEVWNIYGNAEVMGRLYVKQPLK
AVVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNVRFTGLNRENLIMEGM
SKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVNPNEPVFLVCNVKGTPP
PRCSWSLDEDPVIKDTHHHLGHYETHEGHVVSQLNVTHTQVQDGGVYRCTCSNSAGVVYH
QARINVRGRASIRPMKNITAIAGRDAFVHCRVIGYPYYSIKWYKNSALLPFNHRQRAFEN
NGTLKLTNVQQVDAGEYNCKVMVQPNKMDSQSVHLRVRVPPYIQPFEFQRFTIGQRVFIP
CVVMSGDRPLDITWQKDGRPIPISLGVTVDNIDFTSSLRISNLTPDHNGNYTCVARNEAA
AVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTIVWEHSKGAGVPQFQP
IQLNSGSRVQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKSMYLTVKIPAMITSYP
NTTLATQGEEKKMSCIAHGEKPIMVRWEKEERIINPETSRYVVTVKEVADEVISTLVIMP
TVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDRTIALRWTMGFDGNSP
ITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIRMVAKNIIGNSNPSNE
LTITTDEAAPDGPPQDVLLEPTSPQSIKVSWRPPQKHLQNGVIRGFQVGYREYSPGGSHQ
FTIISLDTTGDTTESIVLDDLKKFTQYSVVVQAANRAGTGPSSQQVVIKTLEDVPSRPPE
NVLAVAKSPEVISLSWMPLPREALNGNLQGYRVIYWANLPDGELGEIRNVTTNQPSLELD
GLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAAASSSSVVFVSWLPPL
KLNGIIRKYIVFCSNLHPMVMSEFEASPDAYFYRIPNLARNRQYSIWVVAVTAAGHGNNS
EKITVEPLAKAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPTIKWLKGNTNGTPTPVLV
DGRRSVHGNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQVPPDQPRLTVTKTTT
TSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLT
AQNAVGPGRISEIIEAKTHGKEPQFAKEHELFTSINSTRARLNLVGWNNGGCPITSFILE
YRAVDSATWTTAQRTSLTKSYILYDLQEATWYELQMKVTNSAGSAEKRITFATLNADGGT
IPPLLKTGDPISDNMSGSGGLKMVVTITSVLVVAVLVFIMLMVIKRRRREQRLKRLRDAK
SLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDNDFG
ETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAGPVAARSRYASQWT
LNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTY
EELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSLTSSTPSESGICRF
TASPPKPQDVSRVMTMAVPKAHRPGGELVHLPPYLRMDFLLNRGVPLAARGGGVSSSSGS
SSSGGGGGASGVGAGGAGATGETRGVGGGGGGAMGQTCLEPQRSRTLKRPPPMEPTPMEV
PSPREVQQWQPGTASTLPHRDVRERGEARGEVRAEAPSSGDLAQAQAAKLSTSQESLLDS
RGHLKQSNNPYAKSYTLV
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcagtgtagccgtcttcaagtgcattatccctgcttctgtcgaggcctacgtc
actgttgtatcatgggagaaagacacagtttctctcagctcaggacaaagatatctcatc
acatccacgggagccttgtatattctggacgtcctgcctgaggatgggctgaataactat
cgctgcaccacacgccaccgctacacgggcgagactcgtcagagcaacagcgcgcggctc
attgtgtcagaccccaccaatgccgagccagacatcttggatggcttcgaccagcgagag
gtgatgatcgatcatcgggtggagctgccctgtaaggcctcaggctacccaacgcccaaa
taccgctggctgaaggacaacagccctttggagcctgacagtcgcttccgccaaaccacc
acggggttgctgatagagagcacacagcccaatgactctgggacgtatgtttgtgaagtg
tggaacatttatggcaacgctgaggtgatggggcgcctgtatgtcaaacagcccttgaag
gcagtggtcagccctcggaaggtgaaaggcagtgtgggtagcaaggtgtctctgtcttgt
agcgtgagcggctcagacgagtatgagctgtcatggtaccgcaacggagagatcatctac
cctggcaacaatgtgcgtttcaccggactgaaccgggagaacctcatcatggaggggatg
tcgaagagcgacggaggagcctatcagtgcttcgccaggaagggcaagatgtcggcacag
gactttgtgcaagtcatccttgaagatggtactccgaagatcctgtcctccttcagcgag
aaggtggtgaacccgaacgagcccgtcttcctggtctgcaatgttaagggcacgccgccc
cccagatgctcctggtcgctggatgaggaccccgtcatcaaagacacccaccaccacctg
ggccactacgagacccacgagggccacgtggtcagccagctgaacgtcacacacacccag
gtgcaggacggcggggtgtaccggtgcacgtgcagcaactcggccggggtcgtgtaccac
caggctcgaataaacgtaagaggccgcgccagcattcgtccaatgaaaaacatcacagcg
attgctggacgggatgcgttcgttcactgccgtgtgattggctacccttactactccata
aagtggtacaaaaactcggcactgctaccgttcaatcaccgccagcgagcttttgagaac
aacggcacactgaagctgaccaacgtgcagcaggtggacgctggcgagtacaactgcaag
gtgatggtccaacccaacaagatggactcccagagtgtccatcttcgtgtgagagtgcct
ccctacattcagccctttgagttccagcgtttcaccattggccaacgtgtcttcatcccc
tgcgtggtcatgtcgggcgaccgcccgctggacatcacctggcagaaagatggacggccg
atccccatcagcctgggtgtgactgtggacaacatcgacttcaccagctcattgagaatc
tccaacctcacgcccgaccacaacggcaactacacctgcgtcgcccgcaacgaggctgct
gcagtggagcaccagagtcagctcattgttagagttcctcctcagtttgtggttcagcct
gaggatcaagatgggatctatgggaaaacggtgactcttaactgctcggctgaaggctac
cctccacccaccatcgtatgggaacactccaaaggcgccggcgttccccagtttcagccc
atccagctgaacagtggctctcgtgtgcagctgctgagcaacggttcgcttctaatcaaa
cacgtgctggaggacgacagcggcttctacctgtgtaaggtcagcaacgacgtgggagct
gatgtcagcaagtccatgtacctcaccgtcaaaatcccggccatgatcacctcctacccc
aacaccacgctggccacgcagggcgaggagaagaagatgagctgcattgctcacggggag
aaacccatcatggtgcgctgggagaaagaagaacgcatcatcaacccggagaccagccga
tacgtggtcaccgtcaaagaggtggccgatgaagtcatctccacgctggtgattatgcca
actgttcgtgaggactcgggtttcttctcctgtcatgccatcaactccttcggggaggac
cgaggcatcatacagctgacagtgcaagaaccgcccgaccctccagaggtggagatccgc
gaggtaaaagatcggacaatagctctccgctggaccatgggctttgacggcaacagcccc
atcacgggatatgatattgaatgcaagaacaaatcagcgtcatggctatcagcccaggta
accaaagatgtgtcaccacagctcaaccaggccacgattattgacctccacccttcctcc
acttacaacatccgcatggtcgccaagaacatcatcggcaacagcaaccctagcaacgag
ctcaccatcaccactgatgaagcagctcctgacggtccaccacaggatgtccttttggag
cccacctccccacagagcatcaaagtttcctggaggcctccccagaagcacctgcagaac
ggagtgatccgcggcttccaggtgggctacagggagtacagccccggcggcagccaccag
ttcaccatcatcagcctggacaccacaggagacaccacagagagcatcgtgctggacgac
ctgaagaagttcactcagtacagcgtggtggtgcaggctgctaatagggctggcaccggg
ccttcgtcgcagcaagtcgtcatcaaaaccctggaggatgtgccgtctcggcctcctgaa
aacgtcctggctgtggcaaagtccccggaggtcatctcgctctcctggatgcctctaccc
cgagaggctctcaatgggaacctgcagggatacagagtcatctactgggccaacctgccc
gacggagaactgggagaaatcaggaatgtgaccaccaatcagccgtctctggagctggac
ggattggagaagtacaccaactacagcatccaggtcttggccttcaccaacgctggagat
ggtgtccgcagtgaacagatctacgtccgcactaaagaggatgttcctggtcctccagcg
ggggttaaagctgcagcctccagcagctccgtggtgtttgtgtcctggcttcctcccctc
aaactcaacggcatcatcaggaaatacatcgtcttctgctctaacctgcatcccatggtg
atgagcgagtttgaggcgtctccagatgcttatttctacaggatccccaatctggctcga
aacaggcagtacagtatctgggtggtggctgtgacggctgctggtcatggcaacaacagt
gagaagatcacagtggagcctctggccaaagctccagccaggattctgaccttcaatggc
acagtgaccactccctggatgaaggacattgttttaccatgcaaggctgtcggagaccct
cctcccaccatcaagtggctcaagggaaacaccaatggaactcccacacctgtccttgtg
gatggtcgtcgtagtgtccatggcaacggcagcttcatcatccgcacggtgaaagcagag
gattctgggaactacagctgtgtggccagcaacaactggggttcagatgagatcacactc
aacctgcaggtccaagtccctcctgatcagccgcgcctcacagttaccaagactaccacc
acatcaatcacattgtcatggatacctggagacaacggagggagctccatcagaggttac
atcctgcagtactcggaggacaacagtgagcagtggggcagttttcccatcagccccagt
gaacgctcgtaccgtctggagaacctgaagtgcggcacctggtacaaattcaccctgacg
gcccagaatgcagtggggccagggcgcatcagtgagatcattgaagctaagacccatggg
aaagagccgcagtttgccaaagagcatgaactcttcaccagcattaactccaccagggcc
aggctcaacctggttggctggaacaacggcggctgtccaatcacatccttcatactggag
taccgagcagtggactcggccacctggaccactgcccagcgcacatcgctgaccaagagc
tacatcctgtacgacttgcaggaggcgacctggtacgaactgcagatgaaggtcaccaac
agcgccggctcagcagaaaagaggatcacctttgctactctcaatgctgacggaggtacc
atccctcccctgctgaaaacgggagatcccatctccgacaacatgtccggcagcggaggt
ctgaagatggtggtgaccatcacctctgtcctcgtggtggccgtgctggtctttatcatg
ctcatggtgataaagaggaggcggagggagcagaggctcaagagactcagagatgccaaa
agcctggcagaaatgctgatgagtaagaacacacggactccagacacagtgaacaagcag
cagcagacactaagaatgcacatcgacatccccagagcccagctccttatcgaggagagg
gacaccatggagacaatcgatgacaggtccaccgtcctgttgacagacaacgacttcggg
gagacgaataagcaaaaatcctccacagtgacccacacagtccactaccagtctctgtcc
caggccactggaccactggttgacgtgtccgatgccaggcctggaaccaatcccactgcc
agacgcactgccaaagctggtcctgtcgcggcacggagccgctacgccagccagtggacc
ctgaaccggccgcaccccaccagctcctcacacaccctcaccactgactggagactccct
acaccacgtgccaccggatctgtggacaaggagagcgacagctacagtgtcagcccctcc
caggacacagatcgtgcacggagcagcatggtctcaactgagagcgcgtcctccacctac
gaggagttggccagagcctacgagcacgccaagatggaagagcagctccgccacgccaag
ttcaccatcaccgagtgcttcatatccgacacctcatccgaacagatgacagcagggacc
aacgactatactgacagcctgacctccagcacgccgtccgagtcgggcatctgccgcttt
accgcttcaccgcccaaacctcaggatgtcagccgggtcatgaccatggccgtgcccaag
gcacacagacctggaggagagctggtccacttgccgccttaccttcgtatggacttcctg
ttgaatcgtggcgtgccactggcagcccgaggtggaggggtcagcagcagcagtggcagc
agcagcagtggaggtggaggaggagcaagtggagttggtgctggtggtgctggtgctaca
ggggagacaagaggagtgggaggaggtggaggaggagccatgggccagacctgcttggaa
ccgcagaggagccgtaccctgaagaggcctcctcccatggaacccacccccatggaagtg
ccgtcgcccagggaggtgcagcagtggcagccaggaactgcctccaccctaccccacagg
gatgtccgggagaggggagaggcccggggtgaggtccgggcagaggctccctcctcggga
gacctagctcaagcacaggctgccaagctcagcacttcccaggagtccctgctggactcc
agaggacacctgaaacagagcaacaacccctatgccaagtcctacactctggtataa
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