Cyclopterus lumpus (lumpfish): 117741384
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Entry
117741384 CDS
T09199
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04142
Lysosome
clum04144
Endocytosis
clum05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117741384
04142 Lysosome
117741384
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117741384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117741384
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117741384
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117741384
Exosome [BR:
clum04147
]
Exosomal proteins
Proteins found in most exosomes
117741384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
117741384
NCBI-ProteinID:
XP_034404292
Ensembl:
ENSCLMG00005009669
LinkDB
All DBs
Position
13:complement(15100486..15124482)
Genome browser
AA seq
1677 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPSDAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQTHNNKSVNEALNNLFIVEEDYAALRASIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDATQYASESKDIELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLEASESLR
KQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYGQPPQPSFGYGM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctacctatccgctttcaggagcacctgcagctccagaacctgggcatc
aacccagccaacattggattcagcactctaaccatggagtccgacaagttcatctgcata
agagagaaagtgggggagcaggcccaggtcgtcatcatcgatatggccgaccccaacaat
ccaatccgcaggcctatctctgcagacagcgccatcatgaaccctgccagcaaagtgatt
gcccttaaagcggcaaagaccctgcagatcttcaacatcgagatgaagagcaagatgaag
gctcacacaatgacggatgacgtgaccttctggaagtggatctccctcaacaccgttgcc
ttggtcacagacaatgccgtctaccattggagcatggagggtgattctcagccaatcaaa
gtctttgaccgtcactccagcctggcaggctgccagatcataaactaccgcactgacgcc
aaacagaagtggttgctgctcattggcatttcagcacagcaaaaccgtgttgtcggagcc
atgcagctgtactccgtggacaggaaggtgtctcagcccattgagggacatgctgctggc
tttgcacagttcaagatggagggcaacactgaagagtcaaccctgttctgctttgctgtg
cgaggacaggcgggaggaaagctgcacatcattgaagtggggactccaccgactgggaac
cagccatttccaaagaaagccgtggatgttttctttcccccagaagctcaaaatgacttc
cctgttgctatgcagatcagttccaagcaagatgtagtctttctcatcaccaaatatggc
tacatccacctgtatgaccttgagactggaacttgtatctacatgaacaggatcagcggg
gagaccatctttgtcactgccccccatgagcccactgcgggtatcattggagtcaacagg
aaaggacaggtgttgtccgtgtgcgtggaggaggaaaacatcattccctacatcaccaat
gtgctccagaacccagacctggccctccgcatggcggtccgcaacaaccttgccggtgct
gaggagctgtttgcccgcaagttcaacaccctctttgcagcgggaaactattcagaggct
gccaaggtggcggccaatgcacccaagggtatcctgcggaccccagacaccatccgtcgc
ttccagagtgttccagcccaaccaggccagacgtctcccttgctccaatactttggcatc
ttgctggaccaaggccaacttaataagtttgagtctctggagctgtgcaggcctgtcctc
caacagggacgcaagcaactcctagagaaatggttgaaagaggacaagctggagtgctct
gaggagcttggagacttggtgaagtctgtagaccctactcttgccctcagtgtctacctc
agagccaacgtccccaataaggtcattcagtgctttgcagagacgggacaattccagaag
attgtcctctatgccaagaaggtgggctacactccagactggatctttctgcttaggaac
gtaatgcggatcagcccagaacagggccttcagttctcccagatgctggttcaggatgaa
gagccacttgcggacattacacagattgttgatgtgttcatggagtacaacctgatccag
cagtgcacatccttcctcctagatgccctaaagaataacagacccatggagggaccactg
cagacgcgcctgctggaaatgaatttggtgcacgcaccacaggttgcagacgccatcctg
ggcaatcagatgttcacccactatgatcgtgctcatgtggcacagctgtgtgagaaggcc
ggtctcctgcagagggcgctggagcattatactgacctgtatgatatcaagcgcgctgtg
gtgcacacacatcttctcaacccagagtggttggtgaatttctttggctccttgtcggtg
gaggactctctggagtgtctgagggccatgctgtctgctaacatccgccagaacctgcag
atctgtgtgcaggtcgcctccaagtaccatgaacagctctccactcagtccctcactgaa
ctttttgagtcattcaagagctttgagggtttgttctatttcttgggttctattgtgaac
ttcagccaggatccagaggtccatttcaaatatatccaggccgcctgcaagacgggccag
atcaaagaggtggagaggatctgtcgagaaagtaactgctacgaccccgaacgtgtgaag
aacttcctcaaggaagccaagctgactgaccagctgcctttgatcattgtgtgtgaccgc
tttgattttgtccatgatctggtgctgtacctgtaccgcaacagcctgcagaaatacatt
gagatctacgtgcagaaggtgaacccgagccgcctgccggtagtcattggtgggttactg
gatgtggattgtgctgaggatgtgattaagaacctgattctggtggttagagggcagttc
tccacagatgaactggtggctgaagtggagaaaagaaatcgactgaagctgctgctgcct
tggttagaggctcgtattcatgaaggatgtgaggagcctgctacccacaatgccctggcc
aagatctacatcgacagcaacaacaacccagagcgattcctgagggagaaccccttctat
gacagccgtgtggtgggcaagtactgtgagaaaagagacccccacctggcctgcgtggcc
tatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaacgagaactcgctgttc
aagagtctgtcccgctaccttgtgcgtcgcaagaaccctgagctgtgggcgagcgtgctg
ctggagaccaacaactacagaagaccactcatcgaccaggtggtccagacagccttgtct
gagacccaggatccagaggaggtgtctgtcacagtcaaggccttcatgaccgctgacctt
cccaatgagctcatcgagcttctggagaagattgtcctggataactctgtctttagcgag
cacagaaacctccagaatctgctcatcctgacagccattaaagctgaccggactcgtgtt
atggagtacatcaaccgtctggacaactacgatgccccagacattgcaaacatcgccatc
agcaatgagctctttgaggaggcctttgctatttttagaaaatttgatgtcaacacctct
gctgtgcaggttctgattgagcacatcggtaacctggacagagcttatgagtttgctgag
cgctgcaatgagccaccggtgtggagtcagctggcaaaggcccagcttcagaagggcctg
gtcaaagaagccattgactcttacatcaaggctgatgacccctctgcttacatggaggtg
ggacaagctgcagcccaaagtggaaattgggaggacctggtgaagtttctgcagatggcc
cgtaagaaggcccgtgagtcatacgttgaaacggagctgatcttcgccctggccaagacc
aaccgcctggctgagctggaagagttcatcaatggacccaataatgctcacattcagcaa
gtgggtgatcgttgctatgacgacaagatgtacgacgcggccaaactgctttacaacaac
gtgtccaactttggccgtctggcctccactctggtgcacctgggagagtaccaagcagct
gtggacggagctcgcaaggccaacagcactcgcacctggaaagaggtgtgctttgcgtgt
gtagatgggaaagagttccgtcttgcccaaatgtgcgggctgcatattgtcgttcacgcc
gatgaactggaggaactcatcaactactaccaggaccgcggttactttgaggagctgatc
accatgctggaggccgcccttggactggagcgggctcacatgggcatgttcactgagctg
gccatcctatactccaaattcaagccccagaagatgagggagcacctggagctcttctgg
tcccgcgtcaacattccaaaggtcctcagggcagcagagcaggcccacctgtggggggag
ttggtgttcctctacgacaagtacgaggagtacgacaacgccatcatcaccatgatgaac
cacccatctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggccaat
gtggagttgtactacaaggccgttcagttttatctggagttcaaacctttgttactaaac
gacctgctcatcgtcctctctccaagacttgaccactcacgcgccgtcaacttcttcagc
aaggtgaaacagctgcctctggttaaaccttacctaaggtctgtccagacccacaacaac
aagtcagtaaatgaggcactgaacaacctcttcatcgtcgaggaagactatgcggcactg
cgtgcttccatcgacgcctatgacaactttgacaacatctcactggcccagggcctggag
aagcacgagttgattgagtttaggaggattgcggcctaccttttcaagggcaacaaccgc
tggaaacagagtgttgagctctgcaagaaggacaagctctacaaggatgccacgcagtac
gcatccgagtctaaagacatcgagctggcagaggagcttctggcttggttcctgaacgag
gacaagaaggagtgtttcgctgcctgcctattcacctgctacgacctgctgcggcccgac
gtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccatacttcatc
caggtcatgagggagtatctctctaaggtcgacaaactcgaagcctccgagtccctgagg
aaacaggaggagcaggcgaccgagtctcaaccgattgtctacggcacaccccagcttatg
ctcacagcagggcccaacgtggccgtgccccctcagcagccctacggctacggctacaca
gcagcaccgggctacggccagcccccacagcccagctttggttacggcatgtga
DBGET
integrated database retrieval system
