Cyclopterus lumpus (lumpfish): 117741508
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Entry
117741508 CDS
T09199
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117741508 (hnf1ba)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117741508 (hnf1ba)
BRITE hierarchy
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GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117741508
NCBI-ProteinID:
XP_034404476
Ensembl:
ENSCLMG00005009205
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All DBs
Position
13:8247593..8263384
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AA seq
573 aa
AA seq
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MFSNMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPGFGVKLENLPMSPAPPQS
GKMNGVDVDSKPVFHTLTNGHNKGKMSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVDRMLAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILQQFNQAVQGSMGNMTDKGNQDPVFFFPEFNPSGQGMGQPGEEIGSEPS
CKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDAITIPPHSMNPLLSHSSPHHPHTSISPPMRY
SQGPGEVTSSTTISHHSNNAMVTSQSVLQQVSPGGLDHSHSLLSPDGKMISGSGGGLPPV
STLTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQFS
QQLHSPHQQSLMQHSPSHMSQQPFMATVTHSHMYPHKQEPPQYSHPSRFPSAMVVTDGNS
LSTLSSMSSNKTDVPVNKMVQLGGLSWCPLQAW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaaacatggtatccaagctgacatctctgcagcaggagctcctcagcgccttg
ctggactctggagttaccaaagatgttctgatccaggccctggatgatatggaccccagt
ccgcctggctttggagtaaaactggagaacctgcccatgtcccccgctccgcctcagagt
ggcaagatgaacggggtggacgtcgattcgaagcccgtcttccacacgctcaccaacggc
cacaacaagggcaagatgtccggggacgagggctccgaggacggggacgactacgacacc
ccgccgatactgaaggagctccagtcgctcaacacggaggaggccgccgaacagagggcg
gaggtggatcgcatgttggcagaggatccatggcgtgctgcccgcatgatcaaaggttac
atgcagcagcacaacatcccccaacgggaggttgtggacgtcacagggctgaaccagtct
cacctctcccagcacctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctc
tacacctggtatgtcaggaaacagcgggaaattctccaacagttcaaccaggcagtgcaa
ggctctatgggcaacatgacagacaaaggcaatcaggatccagtgttttttttcccagaa
tttaacccgtctggtcagggcatgggtcagccaggtgaagagatcggcagcgaaccctcc
tgcaagaaaatgagacgtaaccgtttcaaatgggggcctgcatcccagcagatcctgtac
caggcctatgaacgccagaagaaccccagcaaggaggagagggaagctttggtagaagag
tgcaacagagccgaatgtcttcaaagaggcgtctccccctccaaagctcagggcctcggc
tctaatctggtcactgaagtgcgagtatataactggtttgccaaccggcgtaaagaggaa
gccttcagacagaagttggccatggacgccattaccataccgccccacagcatgaaccct
ctgctgtcccacagctcgccacatcatccccataccagcatttcacctccaatgcgttac
agccaaggccccggtgaggtcacctcctccacaaccatcagccaccacagtaacaacgcg
atggtgaccagccagtcggtgctccagcaggtgtctccgggaggattggaccacagccac
agtctgctgtcacctgacggcaagatgatttcaggttcaggtggaggacttcctccagtc
agcacactgaccaacatccacagttcccatcacagccaccagcagacacagaacctcatc
atgcccctatctggagtcatggccatagcacagagtttaaacacatcgcaatctcagacg
gtgccagtgatcaacagcgtggcgggcagcctagcggcgctgcagccggtgcagttttcc
cagcagctccacagcccgcaccagcagagcctgatgcagcattcccccagtcacatgagt
cagcagccgttcatggctactgtcacacactcgcacatgtatcctcacaagcaagagcca
ccacaatattcccacccgtcacgtttcccctcggccatggtcgtcacagacggcaacagc
ctcagcaccctcagctccatgtcatcgaacaagacggacgttcctgtaaacaagatggtg
caactcgggggtctctcctggtgtcctcttcaagcttggtga
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