Cyclopterus lumpus (lumpfish): 117741537
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Entry
117741537 CDS
T09199
Name
(RefSeq) CLIP-associating protein 1-B-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117741537
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117741537
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117741537
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117741537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_DAAF5
PDS5
MMS19_N
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
117741537
NCBI-ProteinID:
XP_034404519
Ensembl:
ENSCLMG00005008409
LinkDB
All DBs
Position
2:1464714..1495786
Genome browser
AA seq
1521 aa
AA seq
DB search
MGSMEHLLELVLQKDLGKRLQVGQEVTELVLDEGKTPDMEQDQTLLDRMVDAVASSWVNS
SNFKVVLLGMDILSALVSRLQDRFRTQVGTVLPSLIDRLGDSKDQVRDQDQLLLLKIMDQ
AANPQFVWDRMMGGFKHKNNRTREGLCVCLISTLNVFGSQSLTLSRIVPHICHLLGDPNS
QVRDGAMNCLVEVYRHVGERVRMDLGKKGLPQSRLNVIFSRFDEVQRSGGMVLSPVSDKN
LEDDDSGGRSSSSSRGASLCVKKAVSMGSVRRPAPSPGAKAAGRDAAGAVDEEDFIQGFQ
DVPALQISSNREVEEAMTKIRDVLSDDKRDWELRVAALKKVRSLLLAGAAEFTGFPQQLR
LTEAALKLSAKDLRSQVVREACLTLGHLSAVLGGHFDHAAEAVMPILLSLVSNSAKVMAT
SGMSAIRLILRQTHSPRLIPIITSSCTSKSVAVRRRCFEFLELLLQEWQTSSLERHAAVL
METVKKGIHDADAEARSVARKCYWTFHGHFRREAEQLFQGLEASYQKALQAHLRSGDGAS
SSSSQESLSRLFSGKNTFGSSSTRSKAAAPLRLPASSSPGSLQRSRSDVDVSAAASARTR
MPAAPSVLQSPCSPFSSASALPPGSYASLGRVRTRRTSSGNDPLPSDSRGRSRGKVASQS
QPGSRSGSPGRLLGSAYGRIPRPSVGADSVGDKSRPRGHRSHGCSRETSPSRLAADRLSH
QARISASVNAMKILNTGTDVEAAVADALLLGDSRSKRRPARRRFESPGVHSDDDANSDAS
SVGSERSYGSRNGGGGAPSYLRQMEDVAEVLNHCASANWSERKEGLLGLQSLLKSQRMLS
RVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVSLHREELLDWLFVLLTQLLKKMGAD
LLGSVQAKVQRALDVTRESFPYEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMD
PADFVNSSETRLAVSRVITWTTEPKSSDVRKTLHSWAGEDLSGRGTTVASLPGEGNLEER
CKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHSHLRNASINSGISMASPSNS
AGRTIRTSSPRSPLTSPTNCSQGGLSPRCPQRYPSACRLWGWSADGLSKFPPPPFPAPLP
PPTAHSSLKAVRSAYSPSMLEYDSENLNSEEIYSSLRGVTEAIQNFSFRSQEEGKREPAV
GASWDSDVMVGGRTALDNKTSLLNTPPPRSFAGPRFRDYNPYNYTDAVGTLDKEALKEAL
HEDATGDGDANKNPKSFPASPSEQLALVGELLKELTQGERGPEERRGTLLELLKVAREDS
LGVWEEHFKTMLLLLLETLGDQDHTIRALALRVLKEILRNQPARFKNYAELTVMKTLEAH
KDSHKEVVRAAEEAASTLAASIHPEQCIKVLCPIVQTADYPINLAAIKMQTRAIERIAKE
PLHQLLSDIIPGLLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNL
YIKRAQTSTSNSSSSSDISSY
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcatggagcatctgctggagctggtgctgcagaaggacctggggaagaggctc
caggtgggccaggaggtcacggagctcgtcctggacgagggcaagacccccgacatggag
caggaccagaccctgctggacaggatggtggacgcagtggccagctcctgggtgaactcc
agcaacttcaaggtggtcctgctggggatggacatcctgtctgcgctggtcagcaggctg
caggacagattcaggacgcaggtggggacagttttgccgagcctcatcgatcggctggga
gactccaaggaccaggtccgggaccaggaccagctgctgctgctgaagatcatggaccag
gccgccaaccctcagtttgtgtgggatcgcatgatgggaggcttcaaacacaagaacaac
cggaccagagagggactctgtgtctgtctcatctcaaccctcaacgtcttcggctctcag
agtctcaccctcagtaggatcgtgcctcacatctgtcacctgctgggcgaccccaacagt
caggtgcgtgacggagccatgaactgcctggtggaggtctaccgccacgtgggggagcga
gtgaggatggatctggggaaaaagggtcttcctcagtcccggctcaacgtcatcttcagc
cggttcgacgaggtccagaggtcggggggcatggtcctgtccccggtgtcagacaagaac
ctggaggacgatgactccggcggccgctcctcgtcctcctccagaggagcctcgctctgc
gtgaagaaggcggtgagcatggggtcggtccgacgccccgccccctccccgggcgccaag
gctgcagggcgcgatgctgctggagccgtggacgaggaggacttcatccagggcttccag
gacgtccccgcgctgcagatctcctccaacagggaggtggaggaggccatgacgaagatc
cgagacgtgctgtcggacgacaagcgggactgggagctccgggtggcagcgctcaagaag
gtgcgctcgctgctcctggccggcgccgccgagttcaccggcttcccgcagcagctgcgg
ctcacggaggcggcgctcaagctgtcggccaaggacctccggtctcaggtggtgagagag
gcctgtctcaccctcggacacctgtcggcggtgctcggcggccacttcgaccacgcggcg
gaggccgtcatgccgatcctcctcagcctcgtatccaacagcgccaaagtcatggccacc
tccggcatgtccgccatccgcctcatcctgagacaaacacactccccgcgtctcatcccc
atcatcaccagcagctgcacctccaagtctgtggctgtcaggaggcgctgcttcgagttc
ttggagctgctgctgcaggaatggcagacgagctctctggagaggcacgcagccgtccta
atggagaccgtaaagaaggggatccacgacgccgacgccgaggctcgctccgtggccaga
aagtgttactggactttccacggccacttccggcgggaggcggagcagctgttccagggc
ctggaggcgtcctatcagaaggctctgcaggctcacctgaggagcggcgacggcgcctcc
tcctcgtcctcccaggagagcctcagtcgattgttttctggaaagaacaccttcggaagc
agctcgacacgctccaaagccgccgcccccctccggctgcccgcctcctcctccccagga
tccctccagcgctcccgcagcgacgtggacgtcagcgcggccgcctccgcccgcaccagg
atgcccgccgcgccctccgtcctgcagtcgccctgctcgcccttcagctcggcctcggcc
ctcccgcccgggtcctacgcttcgctgggtcgagttcgaaccagaagaacgagttcagga
aacgacccgttgccaagcgacagccgggggaggagccgagggaaagtggcgtcacagtct
caacccggcagtcggtccggttctcccggccgcctgctaggctccgcctacggccggatc
ccgaggccgagcgtcggcgccgacagcgtcggcgacaagagccgtccccgaggtcaccgc
agccacggctgcagccgagagaccagcccctccagattagctgcggaccggctgtcccat
caggctcgcatctcggcctccgtcaacgccatgaagatcctcaacaccggcaccgacgtg
gaggctgccgttgccgatgctctgctcttaggagactcgaggagtaagcggcggcccgcg
aggcggcggttcgagtccccgggggtgcactccgacgacgacgccaacagcgacgcctcc
agcgtcggctccgagcgctcctacggctcacgcaacggcggcggcggcgcgccgagctac
ctgcggcagatggaggacgtggccgaggtgctgaaccactgcgccagcgccaactggtcc
gagaggaaggaggggctgctagggctgcagagcctgctgaagagccagaggatgctcagc
cgcgtggagctgaagaggctctgtgagatcttcacccgcatgtttgcagaccctcacagc
aagagagtcttcagcatgttcctggagaccctggtggactttgtctcgctgcacagggag
gagctgctggactggctcttcgtcctgctcacccagctgctgaagaagatgggggccgac
ctgctgggctccgtccaggccaaagtccagagggccctggacgtcaccagagagtccttc
ccctacgagcagcagttcaacatcctgatgcgcttcatcgtggaccagacgcagacgccc
aacctgaaggtgaaggtggccatcctgcgctacatcgaggcgctcgcccgccagatggac
ccggccgacttcgtcaactccagcgagacgcgcctcgctgtctcccgcgtcatcacctgg
accaccgagcccaagagctccgacgtccgcaagacccttcatagctgggcgggggaggat
ttgtcaggccggggcaccaccgtggcctctctgcctggggagggcaacctggaggagagg
tgcaagcaggcggcccaggtggtgctaatcgccctgtttgagctcaacacccccgagttc
acgatgctgctcggcgctctgcccaaaacattccaggacgggaccaccaagctgctgcac
agccacctgaggaacgccagcatcaacagcggcatcagcatggcgtctcccagtaactcg
gccggccggaccattagaaccagcagcccgcgcagcccgctgacctcccccaccaactgc
tcccaggggggtctttctcccaggtgccctcaacgatacccatctgcatgtcggctgtgg
ggttggagcgcagacgggctctccaagttccctcctccacctttccccgccccccttcct
ccacccaccgcccactcctccctcaaggcagtgaggtcagcttactcacccagcatgctg
gagtacgacagcgagaacctgaactcggaggagatctacagctccctccggggcgtcacc
gaggccatccagaacttcagcttccgcagccaggaggagggcaaaagggagcctgccgtc
ggggcgtcctgggacagcgacgtgatggtgggaggacgcacggcgctggacaacaagacg
tcgctgctcaacacgccaccgccgcgatccttcgccgggccgcgcttccgagactacaac
ccgtacaactacacggacgccgtgggcaccctggacaaggaggcgctgaaggaggcgctg
cacgaggacgccacgggagacggtgacgccaacaagaaccccaaaagcttcccagcgagc
ccctccgagcagctggcgctggtcggggagctgctgaaggagctcacccagggggagcgg
ggccccgaggagcgccgggggaccctgctggagctgctgaaggtggcccgcgaggacagc
ctgggggtgtgggaggagcacttcaagaccatgctgctgctgctgctggagacgctggga
gaccaagaccacaccatccgggcgctggccctgcgagtcctgaaggagatcctgaggaac
cagccggcccgcttcaagaactacgccgagctcaccgtcatgaagacgctggaggcccac
aaggactcgcacaaggaggtggtgcgtgcggcggaggaggcggcctccacgctggcggcc
tccatccacccggagcagtgcatcaaggtcctctgtcccatcgtgcagacggccgactac
cccatcaacctggccgccatcaagatgcagacgagggccatcgagcgcatcgccaaggag
ccgctgcaccagctgctgtcggacatcatacctggactcctgcagggctacgacaacacg
gagagcagcgtgaggaaggccagcgtcttctgcctggtggccgtctactcggtgatcggg
gaggagctgaagccctacctggctcagctgaccggcagcaagatgaagctgctcaacctc
tacatcaagagagctcagacctccaccagcaacagcagcagctcctccgacatctcctcc
tactaa
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