Cyclopterus lumpus (lumpfish): 117741561
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Entry
117741561 CDS
T09199
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117741561 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117741561 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117741561 (zgc:162872)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117741561 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117741561 (zgc:162872)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117741561 (zgc:162872)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_5
BAR
PH_8
PH_11
Motif
Other DBs
NCBI-GeneID:
117741561
NCBI-ProteinID:
XP_034404560
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All DBs
Position
13:20482461..20505009
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AA seq
686 aa
AA seq
DB search
MDALLDFEECVKDSPDFRLKLELFEADVSVIETQVDKVMKLCGKMVEAGHAYSAANQLFL
TGLAELSMSHKKDSVITNCLNQFNQGLQEMVSFHTMLFDQTQRAISHQLTNLCAQFLPQL
VETRREFVRIGEDLETAALKSAQVSRFKAADAERASHLLLATRKCYQHFALDYCLQLNTF
KTQQRVDVLNSMFSFVHAQFTFFHQGFDLLRDLEPTMKAMAAQLSQASADCAAQRKELEN
KHLLVQRDASGEPSVCPCPGSDDIIQGHLLKRCRRKPKTWKRCWFSIRDNQLMYRKSHKE
NSVVLFEDLRLCAVKSLQNLDRRFCFELLSVQKCCALQADSQQLQQLWLSALHGSIDLAY
REGDDAPLPQPREPPPGPPLQRPPVLGVALSCPGNQQCCDCGEEEPRWASVNLGVTMCIE
CSGIHRSLGVHLSKVRSLTLDSWEAEQLKLLCILGNNVMNQIYEARCSAEGRVKPGAASV
RAEKETWIKEKYVEKRFVSDRGLKGDAGRRLYQAAEAGDLVAMATALAQGAEVNQSIGEE
AGRTALIGAAVGGSLSACEFLLLNRANVNHRDLRGQGALHAAAAAGHTGQVCLLLKRGAN
QYAADERGQDPLAIAVETAHADIVTLLRMARMNEEMRDSDGVFGAMGDDETFQDIFRDFS
DMASHDPDRLSRRQFGRRGDEEEDKG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctgctggactttgaggagtgtgtcaaagactcacctgacttcagactgaag
ctcgagctgttcgaggcagatgtttctgtgatcgagacacaagtggacaaggtgatgaag
ctgtgcggtaagatggtggaggcgggacatgcctacagcgcagccaatcagctgttcctg
accggcctggctgagctctccatgtcccacaagaaggacagcgtcatcacaaactgcctg
aaccagttcaaccagggtcttcaggagatggtcagcttccacactatgttgtttgatcag
actcagagagccatcagccatcagctgaccaacctctgtgcacagttcctgccccagctg
gtggagaccaggagggagtttgtccggatcggagaggatctggagacggcggcgctgaag
agcgctcaggtgtctcgcttcaaagctgcagacgccgagcgggcgagtcacctgctgctc
gccacgcgcaagtgctaccaacactttgccctggactactgtctgcagctcaacactttc
aagactcagcagagagtcgacgtcttaaactcaatgttctccttcgtccacgctcagttc
accttcttccaccaaggattcgacctcctgcgggacctggagcccaccatgaaggccatg
gccgcacagttgtctcaggcgtcagcagactgtgcagcgcagagaaaagagctggagaac
aaacacctgctggtccagagagatgcttctggagagccgtcggtctgcccgtgtcccggt
agtgatgacatcatccagggtcacctgttgaaacgctgcaggaggaaacccaaaacctgg
aagcgatgctggttttccatcagagacaaccaactcatgtacaggaagtcacacaaggag
aactctgtggttctgttcgaggatctccgactgtgtgccgtcaagtctctgcagaacctg
gaccgccggttctgtttcgagctgctctcagttcagaagtgctgtgccctgcaggctgac
tcccagcagctgcagcagctctggctcagcgcgctgcacggcagcatcgacctcgcgtac
cgagagggagacgacgctccgctcccacagcctagagagccccccccgggcccccccctc
cagaggccccccgtgctgggcgtggccctcagttgccccggcaaccagcagtgctgtgac
tgtggggaggaggagcctcgctgggcctccgtcaacctgggagtcaccatgtgtatcgag
tgctcggggatacacaggagtctcggtgttcacctgtccaaggtgagatctctcactctg
gactcctgggaggctgagcagctgaagctgctgtgtattctgggtaataatgtgatgaac
cagatctacgaggcgagatgttcagctgaaggacgagtgaaacctggagctgccagcgtg
cgagccgagaaggagacgtggatcaaagagaaatatgtggagaagagatttgtgtcagat
cgaggtctgaagggcgacgccgggcggcggctctatcaggcggcggaggccggggacctg
gtagccatggcgacggcgttggcccagggggcagaggtcaaccagagcattggggaggag
gcgggacgcacggcgctgatcggagctgctgtcggggggtcgctgtcggcctgcgagttc
ctgctgctaaacagagcaaacgtcaaccaccgagacctgagagggcaaggagccctccat
gctgctgctgctgctggacacacaggacaggtgtgtctgctgctgaagaggggagccaat
cagtacgctgcagacgaacgaggccaggatccgttggccatcgccgtggaaaccgcccac
gctgacatcgtcacactactgcggatggccaggatgaacgaagagatgagggattcagac
ggagtctttggagccatgggagatgacgagaccttccaggacatcttccgtgacttcagc
gacatggcgtctcacgaccccgacaggctcagcagacgtcagtttggccgccgaggcgat
gaagaggaggacaaagggtga
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