Cyclopterus lumpus (lumpfish): 117741576
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Entry
117741576 CDS
T09199
Symbol
slitrk3a
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117741576 (slitrk3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
117741576
NCBI-ProteinID:
XP_034404587
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Position
13:13845057..13852102
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AA seq
904 aa
AA seq
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MLWVTLLSTIALGWTTPIPLLEDSEEIDEPCFEPCYCEVKEGIFHVHCDSKGFTNVSQIS
QIWSRPFKLNLQRNSMRKLYFNSFLHLNNAISLNLGNNALQDIHAGAFNGLGILKRLFLH
ENKLEVFRNDTFLGLESLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPVLPNYLF
RSVSLTHLDLRGNRLKTLPYKGMLEYVGRSLMEIQLEENPWNCVCEIVQLKTWLERIPYT
ALVGEITCDYPFHLHGKDLREIKRSELCPLLSDAEIEAKLGIPRIPFSNENTWPTKPSSM
LSSFHNTASSVEYKERVDKPTKRPRPTKNSPTPRSIYPGINQAPVAGYQTRPPIPIICPA
GCTCNLHINDLGLTVNCKEKGFHNISELLPRPLNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPNLKSLYLNGNDIERLTPGMFRGLQMLSYLYFEYNVIREI
QPNSFSLMPNLQLVFLNDNLLRSLPNDAFAGTNLARLNLRNNYFLSMPVRGVLEHLISIV
QIDFHQNPWDCSCEIIPLKQWLEKLSSVIVVGDVICKTPEFAFGKDLRSLQVEVICPELK
YSSGPSPALPGGDDLITGSSDMGEASGRRAVPLSVLILSLLILFISAVFVAAGLFAFVLR
RRKNLPFRKRSEVDLTGIQMQCRIFEDPPRQSSAGNTSTPEKPTASMHTHTHTSHTHGHG
HVYDYIPHPVTQMCNNPIYKPREGEIAEEDRVQFSEKKDNGSSSNSNYRTLLEKEREWTL
ALSNSQLNTIVTVNHSTADMAGFHENGGLCPTVIDSQRPTPTVGFVDCLYGTVPKLKDMH
VAHAHPPGMQYPDLQQDARLKETLHFTAGKGCYPDPSQSDYLELRAKLQTKPDYLEVLEK
SYRF
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccttgctgagcaccatagccttaggatggaccaccccgatcccacta
ctagaggactccgaggagatcgacgagccttgtttcgagccctgctactgcgaggtcaaa
gagggcatcttccatgtccactgtgacagtaaaggatttacaaatgtcagccagatctcc
cagatatggagcaggccgttcaagctcaacctgcagagaaactccatgaggaagctttac
tttaacagcttcctccatctcaacaatgccatctcccttaacctgggtaataacgccttg
caagatatccacgctggagcgttcaatggcttaggaatactcaagcggctgttcctacat
gaaaacaaactagaagttttccggaatgacacttttctgggcttggagagtttagagtat
ctccaggcggactacaatgtaatcaaacggattgaaagtggggctttcaggcatcttcac
aaattgagagtgctcatactgaacgacaatctgatccccgtgctcccaaattatcttttc
cgatctgtgtcactcacacacctggacctgagagggaacagactaaagacattgccgtat
aagggcatgctggagtacgtgggaaggagcttaatggaaatccagctggaggagaacccc
tggaactgtgtgtgtgagattgtccagttaaaaacttggctggagagaattccgtataca
gctttggtaggtgagatcacatgtgactacccattccacttacatgggaaagacttacgg
gaaatcaagcgcagtgagctctgtccgctgctctctgatgcagagattgaggccaagctg
ggaattccccggatcccatttagcaatgagaacacttggcctactaaaccgtcctccatg
ctctcgtcttttcacaacacagcctcttctgtggaatacaaggaaagagttgacaagccc
accaaacgacctcggcccacaaagaactctccaactcctcgtagtatctatccaggcatc
aaccaggcccctgttgctggctaccaaacaaggcctcccataccaataatttgtccagct
ggatgtacttgcaaccttcacattaatgacctgggtctaacagtgaactgtaaagagaaa
ggctttcacaacatctctgagctcctcccacggcccctcaatgccaagaaattgtacctt
agtgggaacttaatacagaaaatataccgatctgatttctggaacttctcaagtttggat
ttactgcatttagggaataatcggatatcctatgtccaagaaggcgccttcatcaacctg
ccaaacttgaaaagtctatatctgaatgggaatgacattgagagactcacccctgggatg
tttcgagggcttcagatgttgagttatctttactttgagtataacgtcatacgtgagata
caacctaactccttctccctaatgccaaacctccagctggttttcctcaatgacaacctg
ttacgctcccttcccaatgacgcttttgctggcaccaaccttgcacgcctcaacctccga
aacaactacttcctttccatgcccgtgcgtggcgttctggagcatctgatctccattgtc
cagattgatttccatcagaacccctgggactgctcctgtgaaatcatccccctgaagcag
tggctggaaaagctctcctccgtcattgtggttggagacgtcatctgcaagacacctgaa
tttgcgtttgggaaggacctgcgttcgctgcaggttgaggtcatctgtccggagctcaag
tactcttcaggcccctccccggccctgccaggtggggatgacctcatcacagggagctct
gacatgggggaagcaagtgggagacgggctgtcccactgtctgtcctcattctcagccta
ctcattcttttcatctctgctgtgtttgttgctgccgggcttttcgcctttgttcttcgg
cgcaggaagaaccttcctttccggaaacgttccgaggtagatctgacggggatccaaatg
caatgcaggatttttgaggacccaccaaggcagagcagtgctggtaacactagcacaccc
gagaaaccgacagctagtatgcacacacacactcacactagtcacacacatggccatggt
cacgtttatgattacattccccacccggtgacgcagatgtgtaacaaccccatctataag
cctcgagagggggagatagcagaggaagacagagtgcagttttcagagaagaaagacaat
ggcagcagtagcaacagtaactacagaaccttattagagaaagaaagagagtggaccttg
gccctctccaactctcaactcaacactatcgtcacagttaaccactcaacggctgacatg
gcaggatttcatgagaacggagggctctgccctacagtaattgacagtcagaggcccaca
ccaacagtgggctttgtagactgtttgtatgggacagtacccaaactaaaggacatgcat
gtggcgcatgcgcacccaccaggcatgcagtacccggatttgcagcaggatgcacggctg
aaggagacattgcatttcacagcggggaaaggctgctaccctgacccgtcccaaagcgat
tacctcgagttaagggccaaacttcaaaccaagccggattacctcgaagtcttggaaaaa
tcgtaccggttttaa
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